Clone GH10101 Report

Search the DGRC for GH10101

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:101
Well:1
Vector:pOT2
Associated Gene/TranscriptCG31475-RA
Protein status:GH10101.pep: gold
Preliminary Size:3700
Sequenced Size:2691

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3768 2001-01-01 Release 2 assignment
CG14281 2001-01-01 Release 2 assignment
CG31475 2001-07-04 Blastp of sequenced clone
CG31475 2003-01-01 Sim4 clustering to Release 3
CG31475 2008-04-29 Release 5.5 accounting
CG31475 2008-08-15 Release 5.9 accounting
CG31475 2008-12-18 5.12 accounting

Clone Sequence Records

GH10101.complete Sequence

2691 bp (2691 high quality bases) assembled on 2001-07-04

GenBank Submission: AY060269

> GH10101.complete
TTGCTGCTGCGTATCGGACGTGTTCGGTGAGCCAGACTCGCGTCATCCGT
GATTTGGGCCATAACAAAAACAAGTTTACGAAACTTACGTCGTCATCTCG
TTCTTTCCCGCGCGCGTAAACCAAGTCAAAATAAAAGAGAAGCAAAACAA
AAAGGCTGTCCAAAGGAAATTGCAACAAATCAAAAACCAAAAGCGAAAGC
AAAAGTGAGTGCAATAGTTTTTTGTGATTTAATTCCATACCGTTTGCTGC
AGTAACCATGGGCTGCGCCCGCGGTTAACACAACAAATTGATTACCATGG
GCGCGGCGGACCAAAGTCGATTGTAATTGCAATTACCAAGATTGGACCAC
AAAGTACATTTAACCGCACACACACGTGCAACATTCAATGTATGGACGCG
GCCGTAAAAACGGTCATCGCAAGGAGTCAACCTATTGATTTTTGAACCAT
CGCCATCGCCATCGCCATCAGCATTATCAGTGCGCATAATGGAAATGGCG
CTCCTAACAATCATGTAAAATTGGTGTAAAATGCAGACGAGATGGAGACC
CGGAATGAAGGAAATGGGAGTCGTGCGAAAGGCAATAACACATCAAATTG
GTATTAGAAGTTGTTACACCGACGCCCCACGCCAACTACATTTATATATA
TAAAAAGGGGGCGGCAGCTGGGCGTGGCCACGGTGATACAAATTGCAGGA
GCAGGATCCGTAACATTTCGCCTGCCTGTCGCTGGTTGCAACATAAAAGT
CAATTAATGTACAATTACAACAACATCAGGACCACCAGCAACAGGAGAAG
CAACCGGCTTCAAAAGGCACCGAAAGATTAGGGGGCGAAGTGAGGAGGTG
AGGAGGAGCAGAAATTACTGCAAATTACACGCAACGAGTCCTGAAAGCTG
CGGTCCAAGTTGGAGCAAGAGCCGGAAGCCGAGTGGACCGAGGAGGAGGA
GTCGGTGTACCAGAACCTAGAGCTGGTCCCATCAACGCCACCACAGCCTC
CCTGTCGCCAGCCTCAGCCTCAGCCCCATACCCATACCCATACCCATACC
CATTTCCATTCCCATCACCATCATCGCCATCAGCCACTCCACTGCCATCT
ATTGTCCAGCGGTGGCGGCGACAACAACAGCGATAGCGATAGCGAAAGGG
ACGACGAAGGCGGCGGCAACAAAATGACTTTCGTTAACAAGCTGAGCAAA
AGCTTCCGCTGGCTGCGCTGCTCGACATTGTGCGCAATTTTGTTTTATAT
GTTCTTCATTGGCCTGATCCTGCACAGCACCAGCCAGAAGTTGCAGCAGC
AGCTAAAGGAGCAGGGAACCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGT
AGCAGTAGCAGCAGCAGTAGCAGCAGCAGTAGCACGCAGGCAGACACAAA
AATGGCGCCCAACGTGGGGCATAATGGCGCCCAACGTTGGCCGAATACGC
TGCAGGAACTGGAGCAGCAGCAACAAAAACACGAGCAAAGCATGAGACTC
CAGCCTGTGGCAAACAATTTGGATTCGAGGAACGAGAATAACCATCGCCA
ACCCCATCCACAGTCGCAAAAAGTGCAAAATGCCAGCAAATCCCCTAACC
AGCCAGAAACAGTTATTTTAGCGGCCAGCAATGTGAATGAGAAGCAAATA
CTGGCAAAAGCTTTCAAACGTGCCGATCGCAGTCGCGATGGCATTCTGTC
AATCCAGGAATTGGGGCAGTACATAAATCGCCGGATTGTGGAGCACATTG
ATGAGGCGATTATGAACAATGCCCGCGAGTTCCGACGCGTGGATATTGGT
CCTGCGGATGGTCTGATCACCTGGGACGAGTACCACCGCTTCTTCCTTAG
GGAGCACGGCATGACAGAGGCGGACATCGATGAGCATGACGAGATTCGCC
ACACGGCGCTGAACCGCAGGGCCAGGGAGGATATGATGAGGGACAAGGCC
CGGTGGTCGGAGGCAGCTCGAACCGATCTGTTCACACTGACCATCGATGA
ATACCTGAGTTTCCGCCATCCCGAGTCCAGTGTATCCAATCTCTTGGAGC
TGGTCGATGATCTGCTGCGCCAATTCGATCAGGATGGAGACGATCAGCTA
ACCCTGGAGGAATTTTCCGATCTGAATGTGGATGATGACGATGATCTGAT
GCGAAAATCTCTGATATCGAAGACTTTGGTGGAGCGACGCGAGGAGTTCA
AGCGGATCATCGATAAGAATCACGATGGCAAGGCGGATCGGGGTGAGCTA
CTGAACTATGTGAACCCCAAGACTCCGCGGTATGCCCTCCAGGAGGCGGC
CACTTTGTTCAGCCTGTGCGACGAGAACAAGGACGAGCTGCTGACCCTCA
AAGAGATGACTGATCATGCCGAGATATTTCTGCAATCCAAGATGATCGAT
ACGGCGAATAGTTTTCACACAGAGTTCTAGCTTAATTCTTTACCATCACT
AAACCTTTCACCCTTTAAGCATTTATAGTGATATTAATTTGTAAGTTATG
GCACCTAAAATAGCTAATTTAGTAGCAAAGCGTCTTTTTGTTAATAATTT
CTTTAAACTACTTGGATCAGATGTAAAGCAAGATGATGTAAGAAAATCAT
TTCCCGTGTGATTTTTCAATAATTAGCTTTTAAGGACACAAATACTCTCC
GAATAAATATACGTAATTGTACGGAAAAAAAAAAAAAAAAA

GH10101.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:37:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG31475-RA 2688 CG31475-RA 13..2688 1..2676 13380 100 Plus
CG31475.a 2527 CG31475.a 271..2502 445..2676 11160 100 Plus
CG31475.a 2527 CG31475.a 67..270 1..204 1020 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:42:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 15013286..15014512 444..1670 6135 100 Plus
chr3R 27901430 chr3R 15023957..15024642 1670..2355 3430 100 Plus
chr3R 27901430 chr3R 15004609..15005052 1..444 2220 100 Plus
chr3R 27901430 chr3R 15024712..15025032 2354..2674 1605 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:41:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19189350..19190576 444..1670 6135 100 Plus
3R 32079331 3R 19200021..19200706 1670..2355 3430 100 Plus
3R 32079331 3R 19180673..19181116 1..444 2220 100 Plus
3R 32079331 3R 19200776..19201098 2354..2676 1615 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 18930181..18931407 444..1670 6135 100 Plus
3R 31820162 3R 18940852..18941537 1670..2355 3430 100 Plus
3R 31820162 3R 18921504..18921947 1..444 2220 100 Plus
3R 31820162 3R 18941607..18941929 2354..2676 1615 100 Plus
Blast to na_te.dros performed 2019-03-16 09:41:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6733..6968 1274..1513 295 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2520 1293..1504 260 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2510 1294..1496 252 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6891 1321..1492 219 62.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2444..2780 1274..1608 175 56.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6855 1342..1487 173 63.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2220..2428 1273..1481 133 55.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..6865 1356..1503 132 59.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2417..2470 738..793 131 73.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2616..2830 1275..1487 123 55.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1534..1605 757..825 119 65.3 Plus
412 7567 412 412 7567bp 4004..4079 2508..2586 117 64.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6763..6905 1449..1593 116 56.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6769 1445..1496 115 73.6 Plus

GH10101.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:43:06 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 15004609..15005052 1..444 100 -> Plus
chr3R 15013287..15014512 445..1670 100 -> Plus
chr3R 15023958..15024642 1671..2355 100 -> Plus
chr3R 15024714..15025032 2356..2674 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:27:55 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
CG31475-RA 1..1257 1174..2430 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:28:16 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
CG31475-RA 1..1257 1174..2430 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:57:12 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
CG31475-RA 1..1257 1174..2430 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:01:36 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
CG31475-RA 1..1257 1174..2430 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:17:14 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
CG31475-RA 1..1257 1174..2430 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:27:54 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
CG31475-RA 13..2686 1..2674 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:28:16 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
CG31475-RA 13..2686 1..2674 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:57:12 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
CG31475-RA 15..2688 1..2674 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:01:36 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
CG31475-RA 13..2686 1..2674 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:17:14 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
CG31475-RA 15..2688 1..2674 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:43:06 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19180673..19181116 1..444 100 -> Plus
3R 19189351..19190576 445..1670 100 -> Plus
3R 19200022..19200706 1671..2355 100 -> Plus
3R 19200778..19201096 2356..2674 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:43:06 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19180673..19181116 1..444 100 -> Plus
3R 19189351..19190576 445..1670 100 -> Plus
3R 19200022..19200706 1671..2355 100 -> Plus
3R 19200778..19201096 2356..2674 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:43:06 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19180673..19181116 1..444 100 -> Plus
3R 19189351..19190576 445..1670 100 -> Plus
3R 19200022..19200706 1671..2355 100 -> Plus
3R 19200778..19201096 2356..2674 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:57:12 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15006395..15006838 1..444 100 -> Plus
arm_3R 15015073..15016298 445..1670 100 -> Plus
arm_3R 15025744..15026428 1671..2355 100 -> Plus
arm_3R 15026500..15026818 2356..2674 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:39:31 Download gff for GH10101.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18921504..18921947 1..444 100 -> Plus
3R 18930182..18931407 445..1670 100 -> Plus
3R 18940853..18941537 1671..2355 100 -> Plus
3R 18941609..18941927 2356..2674 100   Plus

GH10101.pep Sequence

Translation from 1173 to 2429

> GH10101.pep
MTFVNKLSKSFRWLRCSTLCAILFYMFFIGLILHSTSQKLQQQLKEQGTS
SSSSSSSSSSSSSSSSSSSSTQADTKMAPNVGHNGAQRWPNTLQELEQQQ
QKHEQSMRLQPVANNLDSRNENNHRQPHPQSQKVQNASKSPNQPETVILA
ASNVNEKQILAKAFKRADRSRDGILSIQELGQYINRRIVEHIDEAIMNNA
REFRRVDIGPADGLITWDEYHRFFLREHGMTEADIDEHDEIRHTALNRRA
REDMMRDKARWSEAARTDLFTLTIDEYLSFRHPESSVSNLLELVDDLLRQ
FDQDGDDQLTLEEFSDLNVDDDDDLMRKSLISKTLVERREEFKRIIDKNH
DGKADRGELLNYVNPKTPRYALQEAATLFSLCDENKDELLTLKEMTDHAE
IFLQSKMIDTANSFHTEF*

GH10101.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:15:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16540-PA 504 GF16540-PA 89..504 1..418 1662 82.5 Plus
Dana\GF24450-PA 329 GF24450-PA 78..329 157..418 157 26.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:15:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23173-PA 415 GG23173-PA 1..415 1..418 2100 94.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:15:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17365-PA 451 GH17365-PA 176..451 143..418 1409 95.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG31475-PB 418 CG31475-PB 1..418 1..418 2143 100 Plus
CG31475-PA 418 CG31475-PA 1..418 1..418 2143 100 Plus
CG31650-PG 339 CG31650-PG 35..324 102..409 182 23.2 Plus
CG31650-PF 342 CG31650-PF 35..327 102..409 176 22.6 Plus
CG31650-PE 342 CG31650-PE 35..327 102..409 176 22.6 Plus
CG31650-PD 342 CG31650-PD 35..327 102..409 176 22.6 Plus
CG31650-PC 342 CG31650-PC 35..327 102..409 176 22.6 Plus
CG31650-PB 342 CG31650-PB 35..327 102..409 176 22.6 Plus
CG31650-PA 342 CG31650-PA 35..327 102..409 176 22.6 Plus
scf-PA 329 CG9148-PA 87..329 166..418 160 22.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23903-PA 430 GI23903-PA 1..430 1..418 1584 74 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12636-PA 364 GL12636-PA 1..364 1..418 1453 70.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:15:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16275-PA 412 GA16275-PA 1..412 1..418 1575 78.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:15:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26829-PA 152 GM26829-PA 1..132 1..154 446 82.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:15:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19277-PA 418 GD19277-PA 1..418 1..418 2192 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:15:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23999-PA 453 GJ23999-PA 1..453 1..418 1603 70.9 Plus
Dvir\GJ12145-PA 326 GJ12145-PA 75..326 157..418 149 24.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:15:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13801-PA 532 GK13801-PA 109..532 1..418 1609 74.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:15:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25588-PA 658 GE25588-PA 305..658 67..418 1766 95.8 Plus
Dyak\GE25589-PA 144 GE25589-PA 16..144 290..418 668 100 Plus
Dyak\GE25588-PA 658 GE25588-PA 146..308 1..170 629 85.5 Plus

GH10101.hyp Sequence

Translation from 1173 to 2429

> GH10101.hyp
MTFVNKLSKSFRWLRCSTLCAILFYMFFIGLILHSTSQKLQQQLKEQGTS
SSSSSSSSSSSSSSSSSSSSTQADTKMAPNVGHNGAQRWPNTLQELEQQQ
QKHEQSMRLQPVANNLDSRNENNHRQPHPQSQKVQNASKSPNQPETVILA
ASNVNEKQILAKAFKRADRSRDGILSIQELGQYINRRIVEHIDEAIMNNA
REFRRVDIGPADGLITWDEYHRFFLREHGMTEADIDEHDEIRHTALNRRA
REDMMRDKARWSEAARTDLFTLTIDEYLSFRHPESSVSNLLELVDDLLRQ
FDQDGDDQLTLEEFSDLNVDDDDDLMRKSLISKTLVERREEFKRIIDKNH
DGKADRGELLNYVNPKTPRYALQEAATLFSLCDENKDELLTLKEMTDHAE
IFLQSKMIDTANSFHTEF*

GH10101.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:50:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG31475-PB 418 CG31475-PB 1..418 1..418 2143 100 Plus
CG31475-PA 418 CG31475-PA 1..418 1..418 2143 100 Plus
CG31650-PG 339 CG31650-PG 35..324 102..409 182 23.2 Plus
CG31650-PF 342 CG31650-PF 35..327 102..409 176 22.6 Plus
CG31650-PE 342 CG31650-PE 35..327 102..409 176 22.6 Plus