Clone GH10229 Report

Search the DGRC for GH10229

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:102
Well:29
Vector:pOT2
Associated Gene/TranscriptCG8042-RA
Protein status:GH10229.pep: gold
Preliminary Size:2816
Sequenced Size:2165

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8042 2000-02-14 Blastp of sequenced clone
CG8042 2001-01-01 Release 2 assignment
CG8110 2001-01-01 Release 2 assignment
CG8111 2001-01-01 Release 2 assignment
CG8114 2001-01-01 Release 2 assignment
CG8042 2003-01-01 Sim4 clustering to Release 3
CG8042 2008-04-29 Release 5.5 accounting
CG8042 2008-08-15 Release 5.9 accounting
CG8042 2008-12-18 5.12 accounting

Clone Sequence Records

GH10229.complete Sequence

2165 bp (2165 high quality bases) assembled on 2000-02-14

GenBank Submission: AF145658

> GH10229.complete
CTGGAATAACAAAAACAGACAAAATTACCCGTATCCGAACCGAGTCGTTA
TTCCAACACCAAACATGAACTGGCACAAGGGCAACATTGCGGAGGCCGTG
GCGGCATCAAAGGCCAAGGGCGCCGTGTTTGTCGTCTTCATCGAGGGCCA
GGACGAAATGACCCGAAAACTAGAGCGGTTCGTGGATGACAGTCAGGTGC
GCTCCCGCCTGGAAACCTCCGATTTTGTCGCCATCAAAGTCCAGGGAAAT
AGCTCCGCCTACGGACAGTTCATGTCGTTATACAAAATCGTGCCAATTCC
CTCGCTCTTCTTTATTGGCAAAACGGGTACACCTCTGGAGATAGCCACTG
GGGTTACGGCCAGCGTAGATGAACTGACGGAAAAGATCGATAAGGTTCTG
ATCCTGGCGGGAAAACGAACCGAGCCTGTGGCAGCCAGCAGCTCTTCATG
TGCGAAGACACTTGACCCCAATGAAGTCAGGAGCTTCGCCGGAGCAGATG
GCTCAAGCAGCACTGGGGAATCTCAAGTAGTTCAAACAGCATCAGAAAAC
TTTAGAGATCCTGAAACCACCTCAGTTTCAAACTCACCAACTGGAGGTGT
GGAGGAGGCCAAGACGAATCCACCAAATTCTCCTGTAGCAGCCAGCTTGG
CATCTATACCCGCTGCTGTATCAACCTCCAGTTTGGAAGGAAAATCAGGA
TCAGAGGCAGAGGCTGCTTCTCCCACCGCTTTGGCGGCCGAAAAGAGAGC
AGCAGCGAGCAAAGTGGAGGGTTCAGCTACCACATCCGGGGCAGCTGCTC
GGAATTTTGCCACTAATAATCTTATACCGGCTGTGCCGCTAATGACACCT
GCTGTCCCAGTTCCAACACAACGACCGCTCGAAGCCCAGGACAACACCGA
ATCCGAGGAAAGGTTGGCCGAAGTCAGGAACATTCTGGAGCAAAAGCGAA
AGGAGCGTGTGGAGGAGGAGAAACGTATGGAGAAGGAGAACGAGCTGAGA
CGACGCAGGGACGGAAGGGAGGCACAGAGCCAACAGGCAAGGGCCAAGGA
GCAGGAGCTCAAGAATATGCAGGAACAGATTAAGCGTGAGCGTCAGGAGG
AGCTGGCGGCCAGGGAGCGCATTCGTGCCCAAATTGCAGCCGATCGGGCA
GAGCAGGCACAACGTTTTAATACGCCGGACATTAGCAGCACGACCAATTC
GGTGGCGGCCACCGCTGCCTCCAACGTGATCACAACAGACGCCTCGGTGA
GTTCGGTGGACGAGACGAGGCTGCAGATCCGACTACCCGGTGGCATTCAG
CGCACCAAATCCTTTCCAGCCGGCGAGGTGCTGGCTACCGTTCGTGTCTA
CGTGCGAAACGAGATGCTGGCGGCGAGCGATGTACGCGACTTTACCCTGG
CTACCAGTTACCCACGAAGGGAGTTCCAAACGGAGGACGAGGTCAAGACC
CTGAACGAGCTAAATCTAGTGCCCAATGCGGTGGTTCTGGTGCTGACCAA
GGAGCAAGTGAATCGTGTGGTTCAAAGCGGTGGCTCCCTGATGACCATGC
TGGGCACCGTAATTTGGGCTTTGCTCACACCGGCGGCCAAGGCTTTCGAC
TACATAAACAAGATGGGTCTTCGACCGCTCACCCAGAAGCTGAGCGTGTT
CATGGCCAACTTCCGGTGGCCAGGGCAACGGGCCGGCCTGGAAGTTTACC
AGGGCGATGCTGCTGCCCGTCGCAACATGGATATGTTCTCCCTGCGACCG
ACACCAGCTCCAGGCTACGAATACGATGGTGCTTCAACGGAACAGACTGG
CGGATCAGCGGAGCGGCCCACTCCACAAAATCAACCGGGACCGGGAAATA
CTCCGCCGGCTCATAACACCAGCCAAGCTTCCGCTTCGCAGTCTCAGCAA
TTCCAACAGCGACCCGGTGGCTATCAGCCGCCAAAATATGGTGACTCGAA
TATTCGAAGATTGCAGGATACGAAGAAGGATGAAAAGGATAAGGACAAGG
CAACTTATAATGGAAACTCCACGCAGCAGCAATAGAATAACGCAATTCCT
TTACAGTAATCTGTTTGACGACAGTCTATAGCTATCGAACTATGCAATAA
CCTGTTATGCTAAATTTAATTATATCAATTCAATATTCCAAAATATCAAA
AAAAAAAAAAAAAAA

GH10229.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG8042-RA 2228 CG8042-RA 82..2228 1..2147 10735 100 Plus
CG8042-RB 1870 CG8042-RB 320..1870 597..2147 7755 100 Plus
CG8042-RB 1870 CG8042-RB 44..321 1..278 1390 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:12:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 7965104..7965743 1710..1071 3185 99.8 Minus
chr3L 24539361 chr3L 7965807..7966343 1073..537 2685 100 Minus
chr3L 24539361 chr3L 7964607..7965043 2147..1711 2185 100 Minus
chr3L 24539361 chr3L 7966459..7966716 539..282 1290 100 Minus
chr3L 24539361 chr3L 7966977..7967123 147..1 735 100 Minus
chr3L 24539361 chr3L 7966786..7966921 281..146 680 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:41:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:12:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7972946..7973585 1710..1071 3200 100 Minus
3L 28110227 3L 7973649..7974185 1073..537 2685 100 Minus
3L 28110227 3L 7972447..7972885 2149..1711 2195 100 Minus
3L 28110227 3L 7974301..7974558 539..282 1290 100 Minus
3L 28110227 3L 7974819..7974965 147..1 735 100 Minus
3L 28110227 3L 7974628..7974763 281..146 680 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:02:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 7966046..7966685 1710..1071 3200 100 Minus
3L 28103327 3L 7966749..7967285 1073..537 2685 100 Minus
3L 28103327 3L 7965547..7965985 2149..1711 2195 100 Minus
3L 28103327 3L 7967401..7967658 539..282 1290 100 Minus
3L 28103327 3L 7967919..7968065 147..1 735 100 Minus
3L 28103327 3L 7967728..7967863 281..146 680 100 Minus
Blast to na_te.dros performed on 2019-03-16 16:12:44 has no hits.

GH10229.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:13:59 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 7964607..7965043 1711..2147 100 <- Minus
chr3L 7965104..7965741 1073..1710 99 <- Minus
chr3L 7965808..7966340 540..1072 100 <- Minus
chr3L 7966459..7966716 282..539 100 <- Minus
chr3L 7966786..7966920 147..281 100 <- Minus
chr3L 7966978..7967123 1..146 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:32:22 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
CG8042-RA 1..1971 65..2035 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:34:36 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
CG8042-RA 1..1971 65..2035 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:04:00 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
CG8042-RA 1..1971 65..2035 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:09:12 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
CG8042-RA 1..1971 65..2035 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:22:18 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
CG8042-RA 1..1971 65..2035 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:37:10 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
CG8042-RA 44..2190 1..2147 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:34:35 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
CG8042-RA 44..2190 1..2147 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:04:00 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
CG8042-RA 27..2173 1..2147 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:09:12 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
CG8042-RA 44..2190 1..2147 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:22:18 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
CG8042-RA 27..2173 1..2147 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:13:59 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7972449..7972885 1711..2147 100 <- Minus
3L 7972946..7973583 1073..1710 100 <- Minus
3L 7973650..7974182 540..1072 100 <- Minus
3L 7974301..7974558 282..539 100 <- Minus
3L 7974628..7974762 147..281 100 <- Minus
3L 7974820..7974965 1..146 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:13:59 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7972449..7972885 1711..2147 100 <- Minus
3L 7972946..7973583 1073..1710 100 <- Minus
3L 7973650..7974182 540..1072 100 <- Minus
3L 7974301..7974558 282..539 100 <- Minus
3L 7974628..7974762 147..281 100 <- Minus
3L 7974820..7974965 1..146 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:13:59 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7972449..7972885 1711..2147 100 <- Minus
3L 7972946..7973583 1073..1710 100 <- Minus
3L 7973650..7974182 540..1072 100 <- Minus
3L 7974301..7974558 282..539 100 <- Minus
3L 7974628..7974762 147..281 100 <- Minus
3L 7974820..7974965 1..146 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:04:00 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7965549..7965985 1711..2147 100 <- Minus
arm_3L 7966046..7966683 1073..1710 100 <- Minus
arm_3L 7966750..7967282 540..1072 100 <- Minus
arm_3L 7967401..7967658 282..539 100 <- Minus
arm_3L 7967728..7967862 147..281 100 <- Minus
arm_3L 7967920..7968065 1..146 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:46:46 Download gff for GH10229.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7965549..7965985 1711..2147 100 <- Minus
3L 7966046..7966683 1073..1710 100 <- Minus
3L 7966750..7967282 540..1072 100 <- Minus
3L 7967401..7967658 282..539 100 <- Minus
3L 7967728..7967862 147..281 100 <- Minus
3L 7967920..7968065 1..146 100   Minus

GH10229.hyp Sequence

Translation from 1 to 2034

> GH10229.hyp
WNNKNRQNYPYPNRVVIPTPNMNWHKGNIAEAVAASKAKGAVFVVFIEGQ
DEMTRKLERFVDDSQVRSRLETSDFVAIKVQGNSSAYGQFMSLYKIVPIP
SLFFIGKTGTPLEIATGVTASVDELTEKIDKVLILAGKRTEPVAASSSSC
AKTLDPNEVRSFAGADGSSSTGESQVVQTASENFRDPETTSVSNSPTGGV
EEAKTNPPNSPVAASLASIPAAVSTSSLEGKSGSEAEAASPTALAAEKRA
AASKVEGSATTSGAAARNFATNNLIPAVPLMTPAVPVPTQRPLEAQDNTE
SEERLAEVRNILEQKRKERVEEEKRMEKENELRRRRDGREAQSQQARAKE
QELKNMQEQIKRERQEELAARERIRAQIAADRAEQAQRFNTPDISSTTNS
VAATAASNVITTDASVSSVDETRLQIRLPGGIQRTKSFPAGEVLATVRVY
VRNEMLAASDVRDFTLATSYPRREFQTEDEVKTLNELNLVPNAVVLVLTK
EQVNRVVQSGGSLMTMLGTVIWALLTPAAKAFDYINKMGLRPLTQKLSVF
MANFRWPGQRAGLEVYQGDAAARRNMDMFSLRPTPAPGYEYDGASTEQTG
GSAERPTPQNQPGPGNTPPAHNTSQASASQSQQFQQRPGGYQPPKYGDSN
IRRLQDTKKDEKDKDKATYNGNSTQQQ*

GH10229.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG8042-PA 656 CG8042-PA 1..656 22..677 3279 100 Plus
CG8209-PA 331 CG8209-PA 46..324 227..495 278 32.3 Plus

GH10229.pep Sequence

Translation from 64 to 2034

> GH10229.pep
MNWHKGNIAEAVAASKAKGAVFVVFIEGQDEMTRKLERFVDDSQVRSRLE
TSDFVAIKVQGNSSAYGQFMSLYKIVPIPSLFFIGKTGTPLEIATGVTAS
VDELTEKIDKVLILAGKRTEPVAASSSSCAKTLDPNEVRSFAGADGSSST
GESQVVQTASENFRDPETTSVSNSPTGGVEEAKTNPPNSPVAASLASIPA
AVSTSSLEGKSGSEAEAASPTALAAEKRAAASKVEGSATTSGAAARNFAT
NNLIPAVPLMTPAVPVPTQRPLEAQDNTESEERLAEVRNILEQKRKERVE
EEKRMEKENELRRRRDGREAQSQQARAKEQELKNMQEQIKRERQEELAAR
ERIRAQIAADRAEQAQRFNTPDISSTTNSVAATAASNVITTDASVSSVDE
TRLQIRLPGGIQRTKSFPAGEVLATVRVYVRNEMLAASDVRDFTLATSYP
RREFQTEDEVKTLNELNLVPNAVVLVLTKEQVNRVVQSGGSLMTMLGTVI
WALLTPAAKAFDYINKMGLRPLTQKLSVFMANFRWPGQRAGLEVYQGDAA
ARRNMDMFSLRPTPAPGYEYDGASTEQTGGSAERPTPQNQPGPGNTPPAH
NTSQASASQSQQFQQRPGGYQPPKYGDSNIRRLQDTKKDEKDKDKATYNG
NSTQQQ*

GH10229.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:31:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10632-PA 678 GF10632-PA 1..678 1..656 1664 61.4 Plus
Dana\GF23804-PA 331 GF23804-PA 127..324 278..474 210 36.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:31:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14929-PA 654 GG14929-PA 1..654 1..656 2739 87.1 Plus
Dere\GG14459-PA 331 GG14459-PA 127..324 278..474 229 36.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16507-PA 632 GH16507-PA 243..632 254..656 875 51.5 Plus
Dgri\GH14985-PA 327 GH14985-PA 120..322 278..476 240 36.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG8042-PA 656 CG8042-PA 1..656 1..656 3279 100 Plus
CG8209-PA 331 CG8209-PA 46..324 206..474 278 32.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12185-PA 744 GI12185-PA 382..744 287..656 761 52.2 Plus
Dmoj\GI12185-PA 744 GI12185-PA 1..149 1..149 473 55.7 Plus
Dmoj\GI13147-PA 326 GI13147-PA 119..321 278..476 246 37.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17818-PA 664 GL17818-PA 1..664 1..656 1585 54.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20784-PA 676 GA20784-PA 1..676 1..656 1551 53 Plus
Dpse\GA20900-PA 339 GA20900-PA 136..332 278..474 233 37.6 Plus
Dpse\GA30080-PA 323 GA30080-PA 133..323 284..482 230 35.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:31:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24979-PA 657 GM24979-PA 1..657 1..656 3061 94.8 Plus
Dsec\GM25009-PA 331 GM25009-PA 127..324 278..474 225 35.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:31:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13028-PA 656 GD13028-PA 1..656 1..656 2988 95.1 Plus
Dsim\GD14045-PA 331 GD14045-PA 127..324 278..474 225 36 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:31:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11421-PA 644 GJ11421-PA 1..644 1..656 1362 48.2 Plus
Dvir\GJ13896-PA 321 GJ13896-PA 115..314 278..474 215 36.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:31:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20313-PA 668 GK20313-PA 1..668 1..656 1532 53.9 Plus
Dwil\GK11003-PA 653 GK11003-PA 1..591 1..569 1306 49.7 Plus
Dwil\GK20587-PA 335 GK20587-PA 159..330 308..476 214 35.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:31:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20381-PA 659 GE20381-PA 1..659 1..656 2730 88.8 Plus
Dyak\GE21649-PA 331 GE21649-PA 127..324 278..474 227 36.8 Plus