BDGP Sequence Production Resources |
Search the DGRC for GH10272
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 102 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12736-RA |
Protein status: | GH10272.pep: gold |
Preliminary Size: | 1604 |
Sequenced Size: | 1668 |
Gene | Date | Evidence |
---|---|---|
CG12736 | 2001-01-01 | Release 2 assignment |
CG12736 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12736 | 2003-01-15 | Blastp of sequenced clone |
CG12736 | 2008-04-29 | Release 5.5 accounting |
CG12736 | 2008-08-15 | Release 5.9 accounting |
CG12736 | 2008-12-18 | 5.12 accounting |
1668 bp (1668 high quality bases) assembled on 2003-01-15
GenBank Submission: AY058330
> GH10272.complete TTAGAATTTATAGCATTTTTTTATATTTATTTCATTAACTTCGGGTAATC AAAATTTTCGAAGTTATCAGCTCACCTATTCTTGCGCTGTGCAGCACTGG CCAACAGCTGTTCGTGTTTTGGTTTTCCGCGACGTGCTCGGTGTTACGTG CTCTGCACCAAGATTACAGACCTGGAGAGGAGAAATGAGCGGACTCCTTC CGAAGTTGTGGCGCCAATGTGAAGCGGGGCTAGTGCGCCGTATCAGCCAG GCACTGATTGGACCCGGCGCCAGTCAGAGCCGGTGGACAGGGACCCGTCT CCTGGCCACCAGTGCGGATAAAAATCCGGCCCCGGGGCTGCGGGAGCTGC CCCACTGCAATGTGGGCACCATTGGTCACGTTGACCATGGTAAAACGACC CTGACCGCCGCCATTACCAGAATCCAGTCACAGAAGGGTCTGGCGGAGTA CCTGTCCTACGACCAGATTGATCGGGCGCCCGAGGAGAAGGCGCGTGGCA TAACTATAAATGCTTGCCATATTGGGTATTCCACTACAGAACGCACCTAC GCTCACACGGATTGCCCGGGTCATGCGGACTACATAAAGAACATGATCTC GGGCGCCTCCCAAATGGATGGCGCCATTCTAGTGGTGGCTGCCACCGATG GTCAAATGCCCCAGACTCGCGAGCACCTTCTTCTGGCAAAACAAGTGGGC ATCCAGCGCATCATAGTGTTTATAAACAAGGCCGATTTGGTGGACCAGGA GGTGCTGGAACTGGTCGAGATCGAGATGCGTGAGATGCTAAGTGATTTCG GCTTTGATGGCGTGAATAGCCCGGTAATTTGTGGCTCAGCGCTGCTGGCC CTTCGCGAAGATAAATCGGAGTTCGGGGTTCCGTCAATTGAAAAGCTACT TGAGCAATGCGACTCTTACATACCAACGCCGCAGCGCGATATCTCGTCCC CATTTATCCTGCCAATAGACAATGCTTTTACGGTACCCGGAAGGGGAACC GTGGTCGTGGGAACCATCAAAAGGGGCACCATTCCCCGGAACGCGGATGC AGACCTACTGGGCTTCAATCAGAACCTGAAGACAAGCATCAGCGACATCC AGATATTCCGGAAGAGCGTGCCTCAGGCACAGGCTGGCGAGAACGTCGGC GCACTGCTGCGAGGTATTAAGATATCCGCCGTGGAGCGGGGAATGCTACT GTGCGCAACCGGCTCCGAGGATATATCCAACCACTTTGAAGGCTCCATGT ATCTGCTATCGCGGGCCGAGGGTGGTCGTGTCAAGCCCATGCTCTCCAAG TATATACAGCAGCTCTTCAGCCAGACGTGGAATGTTCCAGCTAGAATTGA CATAGTTCCAAGTGAGGCTATGCTTATGCCGGGTGAGCATGGCCAGGTGC GCGTCACGCTGCTGCGGAAAATGGTCATGACTCCGGGCCAAGCCTTCACA ATTCGCGAGAACGGAGCGACGGTGGCTACCGGTATGGTGACGCAGCGCCT GCCGTCCCTTGACCTGCCCAAGAACAAGTTATCAAAAGTCTTCGTGGATT GTTAACGACTCGAGATTGTATTTGTAAAAATTCATAAATTGCTGTTCATT ACACACGAGTACTTTCTTTCTAATATATAATATTTGTATGTGTTTAGGTA AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3396227..3396994 | 1355..588 | 3840 | 100 | Minus |
chr2R | 21145070 | chr2R | 3397059..3397647 | 589..1 | 2945 | 100 | Minus |
chr2R | 21145070 | chr2R | 3395879..3396174 | 1649..1354 | 1480 | 100 | Minus |
chr2R | 21145070 | chr2R | 9395488..9395730 | 547..789 | 315 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7508875..7509642 | 1355..588 | 3840 | 100 | Minus |
2R | 25286936 | 2R | 7509707..7510295 | 589..1 | 2945 | 100 | Minus |
2R | 25286936 | 2R | 7508525..7508822 | 1651..1354 | 1490 | 100 | Minus |
2R | 25286936 | 2R | 13508181..13508423 | 547..789 | 315 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7510074..7510841 | 1355..588 | 3840 | 100 | Minus |
2R | 25260384 | 2R | 7510906..7511494 | 589..1 | 2945 | 100 | Minus |
2R | 25260384 | 2R | 7509724..7510021 | 1651..1354 | 1490 | 100 | Minus |
2R | 25260384 | 2R | 13509380..13509564 | 547..731 | 310 | 77.8 | Plus |
2R | 25260384 | 2R | 13509182..13509252 | 349..419 | 160 | 81.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3395879..3396172 | 1356..1649 | 100 | <- | Minus |
chr2R | 3396227..3396992 | 590..1355 | 100 | <- | Minus |
chr2R | 3397059..3397647 | 1..589 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12736-RA | 1..1371 | 185..1555 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12736-RA | 1..1371 | 185..1555 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12736-RA | 1..1371 | 185..1555 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12736-RA | 1..1371 | 185..1555 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12736-RA | 1..1371 | 185..1555 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12736-RA | 160..1808 | 1..1649 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12736-RA | 160..1808 | 1..1649 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12736-RA | 63..1711 | 1..1649 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12736-RA | 160..1808 | 1..1649 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12736-RA | 63..1711 | 1..1649 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7508527..7508820 | 1356..1649 | 100 | <- | Minus |
2R | 7508875..7509640 | 590..1355 | 100 | <- | Minus |
2R | 7509707..7510295 | 1..589 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7508527..7508820 | 1356..1649 | 100 | <- | Minus |
2R | 7508875..7509640 | 590..1355 | 100 | <- | Minus |
2R | 7509707..7510295 | 1..589 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7508527..7508820 | 1356..1649 | 100 | <- | Minus |
2R | 7508875..7509640 | 590..1355 | 100 | <- | Minus |
2R | 7509707..7510295 | 1..589 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3396032..3396325 | 1356..1649 | 100 | <- | Minus |
arm_2R | 3396380..3397145 | 590..1355 | 100 | <- | Minus |
arm_2R | 3397212..3397800 | 1..589 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7509726..7510019 | 1356..1649 | 100 | <- | Minus |
2R | 7510074..7510839 | 590..1355 | 100 | <- | Minus |
2R | 7510906..7511494 | 1..589 | 100 | Minus |
Translation from 184 to 1554
> GH10272.pep MSGLLPKLWRQCEAGLVRRISQALIGPGASQSRWTGTRLLATSADKNPAP GLRELPHCNVGTIGHVDHGKTTLTAAITRIQSQKGLAEYLSYDQIDRAPE EKARGITINACHIGYSTTERTYAHTDCPGHADYIKNMISGASQMDGAILV VAATDGQMPQTREHLLLAKQVGIQRIIVFINKADLVDQEVLELVEIEMRE MLSDFGFDGVNSPVICGSALLALREDKSEFGVPSIEKLLEQCDSYIPTPQ RDISSPFILPIDNAFTVPGRGTVVVGTIKRGTIPRNADADLLGFNQNLKT SISDIQIFRKSVPQAQAGENVGALLRGIKISAVERGMLLCATGSEDISNH FEGSMYLLSRAEGGRVKPMLSKYIQQLFSQTWNVPARIDIVPSEAMLMPG EHGQVRVTLLRKMVMTPGQAFTIRENGATVATGMVTQRLPSLDLPKNKLS KVFVDC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13674-PA | 456 | GF13674-PA | 7..456 | 1..456 | 2123 | 87.5 | Plus |
Dana\GF13698-PA | 489 | GF13698-PA | 78..466 | 53..442 | 1183 | 53.3 | Plus |
Dana\GF22982-PA | 462 | GF22982-PA | 3..325 | 53..338 | 322 | 28 | Plus |
Dana\GF13105-PA | 463 | GF13105-PA | 3..325 | 53..338 | 301 | 27.7 | Plus |
Dana\GF12096-PA | 440 | GF12096-PA | 6..271 | 59..338 | 296 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10739-PA | 456 | GG10739-PA | 1..456 | 1..456 | 2359 | 96.1 | Plus |
Dere\GG20385-PA | 489 | GG20385-PA | 48..466 | 34..442 | 1182 | 50.7 | Plus |
Dere\GG11826-PA | 462 | GG11826-PA | 3..325 | 53..338 | 324 | 28.4 | Plus |
Dere\GG20777-PA | 512 | GG20777-PA | 6..275 | 59..338 | 305 | 30.1 | Plus |
Dere\GG20229-PA | 463 | GG20229-PA | 3..325 | 53..338 | 291 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19814-PA | 462 | GH19814-PA | 1..462 | 1..456 | 2041 | 82.5 | Plus |
Dgri\GH13998-PA | 462 | GH13998-PA | 51..439 | 53..442 | 1187 | 53.6 | Plus |
Dgri\GH18651-PA | 462 | GH18651-PA | 3..325 | 53..338 | 322 | 28.4 | Plus |
Dgri\GH21181-PA | 525 | GH21181-PA | 7..281 | 59..338 | 297 | 30.9 | Plus |
Dgri\GH21478-PA | 463 | GH21478-PA | 3..325 | 53..338 | 295 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mEFTu2-PA | 456 | CG12736-PA | 1..456 | 1..456 | 2334 | 100 | Plus |
mEFTu1-PB | 489 | CG6050-PB | 48..466 | 34..442 | 1148 | 51.2 | Plus |
mEFTu1-PA | 489 | CG6050-PA | 48..466 | 34..442 | 1148 | 51.2 | Plus |
eEF1alpha2-PD | 462 | CG1873-PD | 3..323 | 53..336 | 321 | 28.1 | Plus |
eEF1alpha2-PC | 462 | CG1873-PC | 3..323 | 53..336 | 321 | 28.1 | Plus |
eEF1alpha2-PB | 462 | CG1873-PB | 3..323 | 53..336 | 321 | 28.1 | Plus |
eEF1alpha2-PA | 462 | CG1873-PA | 3..323 | 53..336 | 321 | 28.1 | Plus |
eEFSec-PA | 511 | CG9841-PA | 6..275 | 59..338 | 306 | 29.7 | Plus |
eEF1alpha1-PE | 463 | CG8280-PE | 3..323 | 53..336 | 292 | 26.9 | Plus |
eEF1alpha1-PD | 463 | CG8280-PD | 3..323 | 53..336 | 292 | 26.9 | Plus |
eEF1alpha1-PC | 463 | CG8280-PC | 3..323 | 53..336 | 292 | 26.9 | Plus |
eEF1alpha1-PA | 463 | CG8280-PA | 3..323 | 53..336 | 292 | 26.9 | Plus |
eRF3-PC | 495 | CG6382-PC | 71..380 | 57..340 | 263 | 28.2 | Plus |
eRF3-PB | 619 | CG6382-PB | 195..504 | 57..340 | 263 | 28.2 | Plus |
eRF3-PD | 619 | CG6382-PD | 195..504 | 57..340 | 263 | 28.2 | Plus |
eRF3-PA | 619 | CG6382-PA | 195..504 | 57..340 | 263 | 28.2 | Plus |
HBS1-PB | 670 | CG1898-PB | 247..555 | 57..339 | 244 | 27.9 | Plus |
HBS1-PA | 670 | CG1898-PA | 247..555 | 57..339 | 244 | 27.9 | Plus |
eIF2gamma-PC | 467 | CG43665-PC | 34..376 | 59..365 | 198 | 26.9 | Plus |
eIF2gamma-PD | 475 | CG43665-PD | 42..384 | 59..365 | 198 | 26.9 | Plus |
eIF2gamma-PB | 475 | CG43665-PB | 42..384 | 59..365 | 198 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20403-PA | 461 | GI20403-PA | 1..461 | 1..456 | 2026 | 84.2 | Plus |
Dmoj\GI21331-PA | 451 | GI21331-PA | 40..428 | 53..442 | 1188 | 53.8 | Plus |
Dmoj\GI23129-PA | 462 | GI23129-PA | 3..325 | 53..338 | 322 | 28 | Plus |
Dmoj\GI20468-PA | 514 | GI20468-PA | 6..271 | 59..338 | 303 | 30.8 | Plus |
Dmoj\GI19955-PA | 463 | GI19955-PA | 3..325 | 53..338 | 302 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20115-PA | 457 | GL20115-PA | 1..455 | 1..454 | 2156 | 88.6 | Plus |
Dper\GL17405-PA | 488 | GL17405-PA | 77..465 | 53..442 | 1193 | 53.8 | Plus |
Dper\GL26171-PA | 215 | GL26171-PA | 77..215 | 53..191 | 568 | 73.4 | Plus |
Dper\GL23995-PA | 462 | GL23995-PA | 3..325 | 53..338 | 320 | 28 | Plus |
Dper\GL10091-PA | 397 | GL10091-PA | 3..325 | 53..338 | 299 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11779-PA | 457 | GA11779-PA | 1..455 | 1..454 | 2158 | 88.6 | Plus |
Dpse\GA19322-PA | 488 | GA19322-PA | 77..465 | 53..442 | 1193 | 53.8 | Plus |
Dpse\GA15055-PA | 462 | GA15055-PA | 3..325 | 53..338 | 320 | 28 | Plus |
Dpse\GA22068-PA | 512 | GA22068-PA | 6..275 | 59..338 | 315 | 31.4 | Plus |
Dpse\GA20951-PA | 463 | GA20951-PA | 3..325 | 53..338 | 300 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20785-PA | 456 | GM20785-PA | 1..456 | 1..456 | 2386 | 98 | Plus |
Dsec\GM16446-PA | 462 | GM16446-PA | 3..325 | 53..338 | 324 | 28.4 | Plus |
Dsec\GM15722-PA | 512 | GM15722-PA | 6..275 | 59..338 | 305 | 30.4 | Plus |
Dsec\GM26827-PA | 595 | GM26827-PA | 171..480 | 57..340 | 273 | 28.8 | Plus |
Dsec\GM14160-PA | 670 | GM14160-PA | 247..555 | 57..339 | 240 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15306-PA | 299 | GD15306-PA | 1..299 | 158..456 | 1560 | 98.7 | Plus |
Dsim\GD10969-PA | 275 | GD10969-PA | 1..252 | 190..442 | 611 | 42.3 | Plus |
Dsim\GD21598-PA | 462 | GD21598-PA | 3..325 | 53..338 | 324 | 28.4 | Plus |
Dsim\GD25199-PA | 512 | GD25199-PA | 6..275 | 59..338 | 296 | 29.7 | Plus |
Dsim\GD10821-PA | 461 | GD10821-PA | 3..323 | 53..338 | 294 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20075-PA | 461 | GJ20075-PA | 1..461 | 1..456 | 2067 | 84.2 | Plus |
Dvir\GJ19676-PA | 487 | GJ19676-PA | 76..464 | 53..442 | 1183 | 53.3 | Plus |
Dvir\GJ22318-PA | 516 | GJ22318-PA | 6..275 | 59..338 | 319 | 30.2 | Plus |
Dvir\GJ23103-PA | 462 | GJ23103-PA | 3..325 | 53..338 | 318 | 28 | Plus |
Dvir\GJ17887-PA | 463 | GJ17887-PA | 3..325 | 53..338 | 305 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19666-PA | 443 | GK19666-PA | 1..443 | 1..456 | 1964 | 85.1 | Plus |
Dwil\GK15961-PA | 488 | GK15961-PA | 77..465 | 53..442 | 1169 | 52.6 | Plus |
Dwil\GK12116-PA | 462 | GK12116-PA | 3..325 | 53..338 | 321 | 28 | Plus |
Dwil\GK22048-PA | 463 | GK22048-PA | 3..325 | 53..338 | 296 | 27.1 | Plus |
Dwil\GK15498-PA | 640 | GK15498-PA | 216..525 | 57..340 | 267 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23915-PA | 456 | GE23915-PA | 1..456 | 1..456 | 2361 | 96.7 | Plus |
Dyak\GE12547-PA | 489 | GE12547-PA | 78..466 | 53..442 | 1182 | 53.3 | Plus |
Dyak\GE10959-PA | 462 | GE10959-PA | 3..325 | 53..338 | 324 | 28.4 | Plus |
Dyak\GE13715-PA | 512 | GE13715-PA | 6..275 | 59..338 | 300 | 29.7 | Plus |
Dyak\GE12389-PA | 463 | GE12389-PA | 3..325 | 53..338 | 294 | 27.4 | Plus |
Translation from 184 to 1554
> GH10272.hyp MSGLLPKLWRQCEAGLVRRISQALIGPGASQSRWTGTRLLATSADKNPAP GLRELPHCNVGTIGHVDHGKTTLTAAITRIQSQKGLAEYLSYDQIDRAPE EKARGITINACHIGYSTTERTYAHTDCPGHADYIKNMISGASQMDGAILV VAATDGQMPQTREHLLLAKQVGIQRIIVFINKADLVDQEVLELVEIEMRE MLSDFGFDGVNSPVICGSALLALREDKSEFGVPSIEKLLEQCDSYIPTPQ RDISSPFILPIDNAFTVPGRGTVVVGTIKRGTIPRNADADLLGFNQNLKT SISDIQIFRKSVPQAQAGENVGALLRGIKISAVERGMLLCATGSEDISNH FEGSMYLLSRAEGGRVKPMLSKYIQQLFSQTWNVPARIDIVPSEAMLMPG EHGQVRVTLLRKMVMTPGQAFTIRENGATVATGMVTQRLPSLDLPKNKLS KVFVDC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12736-PA | 456 | CG12736-PA | 1..456 | 1..456 | 2334 | 100 | Plus |
EfTuM-PB | 489 | CG6050-PB | 48..466 | 34..442 | 1148 | 51.2 | Plus |
EfTuM-PA | 489 | CG6050-PA | 48..466 | 34..442 | 1148 | 51.2 | Plus |
Ef1alpha100E-PD | 462 | CG1873-PD | 3..323 | 53..336 | 321 | 28.1 | Plus |
Ef1alpha100E-PC | 462 | CG1873-PC | 3..323 | 53..336 | 321 | 28.1 | Plus |