Clone GH10289 Report

Search the DGRC for GH10289

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:102
Well:89
Vector:pOT2
Associated Gene/TranscriptCG1434-RA
Protein status:GH10289.pep: gold
Sequenced Size:1684

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1434 2008-04-29 Release 5.5 accounting
CG1434 2008-04-29 Picked prior to 5.5
CG1434 2008-08-15 Release 5.9 accounting
CG1434 2008-12-18 5.12 accounting

Clone Sequence Records

GH10289.complete Sequence

1684 bp assembled on 2007-11-16

GenBank Submission: BT031195

> GH10289.complete
CCCGCGATTCCAATCCATGTTGCGACTGCCGACGATTTTAAGGAAGTCCT
TCAGCATGAAGACGCGCCAGAGGCTGGACTACCGCAACAAGCTCATACTG
GCGCCAATGGTGCGCGTGGGCACGCTGCCCATGCGACTGTTGGCCCTGGA
AATGGGTGCGGACATCGTTTACACCGAGGAGCTGGTGGACATCAAGCTGA
TCAAGAGCATACGCAGGCCGAACCCCGCTCTGGGCACGGTGGACTTTGTG
GATCCGTCGGATGGCACGATTGTGTTCCGCACCTGCGCCCAGGAAACCTC
ACGGCTGGTACTACAAATGGGCACCAGCGACGCTGGACGGGCTCTGGCCG
TGGGCAAGCTGCTGCAGCGCGACATTTCCGGTCTGGACATAAACATGGGC
TGTCCCAAGGAATTCTCCATCAAGGGCGGCATGGGCGCCGCCCTGCTCGC
TGATCCCGACAAGGCGGCACACATATTGCGCACTCTGTGCTCCGGCTTGG
ACATTCCAGTCACCTGCAAAATACGCATACTGCCGGACGTGGAGGGTACA
ATCGATCTGGTGCAGAAACTGGCCGCCACGGGCATCGCTGCCATTGGCAT
TCATGCGAGGACGCGCGACGAGCGTCCGCAGCATCCTGCCCATCCCGAGG
TACTGCGTGCCGTTGCCCAGGCGGTTGACATACCGATTATCGCCAACGGT
GGTTCGAAAAACATGCACTGCTACGATGATCTGCGCAAATTTCAAATGGA
ATGCGGCGCCGATAGCGTGATGGTCGCACGTGCGGCACAGATCAATGTTA
GCATCTTCAGGCCGGAGGGCCTGCTGCCCATGGACGAGCTAATCGAGAAG
TATCTGCGCCTGTGCGTCGACTACGACAATGCGCCGCATAACGCCAAGTA
CTGTGTGCAGAGCATACTCAGGGAGCTGCAGGAGACGCCGCGTGGCAAGC
GTTTCCTTCAGTGCCAGACGCTGCAGCAGATCTGCGAGATCTGGGAGCTG
GGCGACTATTGCCGCCGCAAGCAGCGGGAGCTAAAGACGATGGGCAACTC
GGGACGGGCGGAGGTGGAGCCACCGGAGGCGCTGGCCAAGCGACAGAAGC
TGGAGGATGCGGCCATTGCCATAACGGACGAGTACGACGGCATCATTTGC
CGACACATGCCATTCCTGCGCTCCACCTATCCCAGTGATAATCATCTGCC
GAAAACGCAACTATATGTGCATGCTGTCAAAACTGGCAAATCCCCGCCAG
CGTACGAAACGCAGCAGTGTGACAAATTGTTTCGCTCCATCTGCACGTAC
GATGGCCAGCGCTTTAGTAGCTCCTTCTGGGAGAAGAACAAGAAGCAGGC
AGAGCAGGGCGCCGCTCTGGTGGCCCTGCTCCATCTTGGCCAGCTGGAGG
CGGAGGTTCTGCGCGACAATGGCAGCCTGCTCAACTGAGCAGCAAAGTTC
CTCCTGTTTTATGTAAATGTCATCCATTTTGGCTATGTTTTGGACACCAT
TATTTAGTTGTTTTTTTTTTTTTTGATTATTGCAATGGCTGTTGCAACTG
CCTTAGGTGCTGGGAGCAGTATCTGGACTACCTCCATTGGGTTAACAAAG
TTTGCATCTGAATAAACAAAACTGCAAGTGTGCAGTGCTTTAAATATATG
TATGTATTTAGATAAATAAAAAAAAAAAAAAAAA

GH10289.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:33:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG1434-RA 2073 CG1434-RA 370..2039 1..1670 8350 100 Plus
CG1434.a 1945 CG1434.a 370..1833 1..1464 7320 100 Plus
CG1434.a 1945 CG1434.a 1828..1945 1553..1670 575 99.1 Plus
mRNA-capping-enzyme-RA 2466 mRNA-capping-enzyme-RA 2421..2466 1670..1625 230 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 14129189..14130155 225..1191 4820 99.9 Plus
chrX 22417052 chrX 14130218..14130698 1187..1667 2405 100 Plus
chrX 22417052 chrX 14128904..14129127 1..224 1120 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:42:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:35:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14238643..14239609 225..1191 4820 99.9 Plus
X 23542271 X 14239672..14240155 1187..1670 2420 100 Plus
X 23542271 X 14238358..14238581 1..224 1120 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:29:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 14246741..14247707 225..1191 4820 99.8 Plus
X 23527363 X 14247770..14248253 1187..1670 2420 100 Plus
X 23527363 X 14246456..14246679 1..224 1120 100 Plus
Blast to na_te.dros performed on 2019-03-16 18:35:49 has no hits.

GH10289.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:36:51 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 14128904..14129127 1..224 100 -> Plus
chrX 14129189..14130151 225..1187 100 -> Plus
chrX 14130219..14130698 1188..1667 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:32:30 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
CG1434-RA 1..1422 17..1438 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:01:49 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
CG1434-RA 1..1422 17..1438 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:21:44 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
CG1434-RA 1..1422 17..1438 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:47:14 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
CG1434-RA 1..1422 17..1438 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:43:01 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
CG1434-RA 1..1422 17..1438 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:46:22 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
CG1434-RA 370..2036 1..1667 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:01:49 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
CG1434-RA 370..2036 1..1667 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:21:44 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
CG1434-RA 44..1710 1..1667 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:47:15 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
CG1434-RA 370..2036 1..1667 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:43:01 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
CG1434-RA 44..1710 1..1667 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:36:51 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
X 14238358..14238581 1..224 100 -> Plus
X 14238643..14239605 225..1187 100 -> Plus
X 14239673..14240152 1188..1667 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:36:51 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
X 14238358..14238581 1..224 100 -> Plus
X 14238643..14239605 225..1187 100 -> Plus
X 14239673..14240152 1188..1667 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:36:51 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
X 14238358..14238581 1..224 100 -> Plus
X 14238643..14239605 225..1187 100 -> Plus
X 14239673..14240152 1188..1667 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:21:44 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14132391..14132614 1..224 100 -> Plus
arm_X 14132676..14133638 225..1187 100 -> Plus
arm_X 14133706..14134185 1188..1667 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:53:45 Download gff for GH10289.complete
Subject Subject Range Query Range Percent Splice Strand
X 14246456..14246679 1..224 100 -> Plus
X 14246741..14247703 225..1187 100 -> Plus
X 14247771..14248250 1188..1667 100   Plus

GH10289.hyp Sequence

Translation from 1 to 1437

> GH10289.hyp
PRFQSMLRLPTILRKSFSMKTRQRLDYRNKLILAPMVRVGTLPMRLLALE
MGADIVYTEELVDIKLIKSIRRPNPALGTVDFVDPSDGTIVFRTCAQETS
RLVLQMGTSDAGRALAVGKLLQRDISGLDINMGCPKEFSIKGGMGAALLA
DPDKAAHILRTLCSGLDIPVTCKIRILPDVEGTIDLVQKLAATGIAAIGI
HARTRDERPQHPAHPEVLRAVAQAVDIPIIANGGSKNMHCYDDLRKFQME
CGADSVMVARAAQINVSIFRPEGLLPMDELIEKYLRLCVDYDNAPHNAKY
CVQSILRELQETPRGKRFLQCQTLQQICEIWELGDYCRRKQRELKTMGNS
GRAEVEPPEALAKRQKLEDAAIAITDEYDGIICRHMPFLRSTYPSDNHLP
KTQLYVHAVKTGKSPPAYETQQCDKLFRSICTYDGQRFSSSFWEKNKKQA
EQGAALVALLHLGQLEAEVLRDNGSLLN*

GH10289.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG1434-PB 473 CG1434-PB 1..473 6..478 2446 100 Plus
CG1434-PA 473 CG1434-PA 1..473 6..478 2446 100 Plus
CG3645-PC 505 CG3645-PC 29..268 30..287 266 30 Plus
CG3645-PB 505 CG3645-PB 29..268 30..287 266 30 Plus
CG3645-PA 505 CG3645-PA 29..268 30..287 266 30 Plus

GH10289.pep Sequence

Translation from 16 to 1437

> GH10289.pep
MLRLPTILRKSFSMKTRQRLDYRNKLILAPMVRVGTLPMRLLALEMGADI
VYTEELVDIKLIKSIRRPNPALGTVDFVDPSDGTIVFRTCAQETSRLVLQ
MGTSDAGRALAVGKLLQRDISGLDINMGCPKEFSIKGGMGAALLADPDKA
AHILRTLCSGLDIPVTCKIRILPDVEGTIDLVQKLAATGIAAIGIHARTR
DERPQHPAHPEVLRAVAQAVDIPIIANGGSKNMHCYDDLRKFQMECGADS
VMVARAAQINVSIFRPEGLLPMDELIEKYLRLCVDYDNAPHNAKYCVQSI
LRELQETPRGKRFLQCQTLQQICEIWELGDYCRRKQRELKTMGNSGRAEV
EPPEALAKRQKLEDAAIAITDEYDGIICRHMPFLRSTYPSDNHLPKTQLY
VHAVKTGKSPPAYETQQCDKLFRSICTYDGQRFSSSFWEKNKKQAEQGAA
LVALLHLGQLEAEVLRDNGSLLN*

GH10289.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:57:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15959-PA 460 GF15959-PA 1..460 14..473 2215 90 Plus
Dana\GF22874-PA 509 GF22874-PA 29..268 25..282 266 31 Plus
Dana\GF22885-PA 513 GF22885-PA 29..268 25..282 264 31 Plus
Dana\GF14697-PA 395 GF14697-PA 25..271 27..283 188 25.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:57:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17837-PA 473 GG17837-PA 1..473 1..473 2420 95.6 Plus
Dere\GG24669-PA 505 GG24669-PA 29..268 25..282 283 30.7 Plus
Dere\GG21157-PA 396 GG21157-PA 26..257 27..268 201 26.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:57:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12926-PA 460 GH12926-PA 1..460 14..473 1970 80.9 Plus
Dgri\GH10224-PA 503 GH10224-PA 27..266 25..282 258 29 Plus
Dgri\GH11083-PA 398 GH11083-PA 25..344 27..381 224 24.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG1434-PB 473 CG1434-PB 1..473 1..473 2446 100 Plus
CG1434-PA 473 CG1434-PA 1..473 1..473 2446 100 Plus
CG3645-PC 505 CG3645-PC 29..268 25..282 266 30 Plus
CG3645-PB 505 CG3645-PB 29..268 25..282 266 30 Plus
CG3645-PA 505 CG3645-PA 29..268 25..282 266 30 Plus
CG10495-PA 396 CG10495-PA 26..269 27..280 201 23.6 Plus
CG10463-PA 604 CG10463-PA 253..486 20..265 171 26.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:57:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14629-PA 458 GI14629-PA 5..458 19..473 1962 80.7 Plus
Dmoj\GI15082-PA 510 GI15082-PA 24..267 25..286 249 28.7 Plus
Dmoj\GI17600-PA 397 GI17600-PA 25..344 27..381 221 24.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:57:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14922-PA 463 GL14922-PA 5..463 15..473 2152 86.9 Plus
Dper\GL25830-PA 507 GL25830-PA 28..267 25..282 269 30.2 Plus
Dper\GL26162-PA 398 GL26162-PA 26..274 27..283 225 25.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:57:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26573-PA 463 GA26573-PA 5..463 15..473 2152 86.9 Plus
Dpse\GA25459-PA 507 GA25459-PA 28..267 25..282 265 29.8 Plus
Dpse\GA10353-PA 398 GA10353-PA 26..255 27..267 223 26.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:57:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17665-PA 473 GM17665-PA 1..473 1..473 2406 95.3 Plus
Dsec\GM16688-PA 503 GM16688-PA 29..268 25..282 279 29.9 Plus
Dsec\GM17321-PA 316 GM17321-PA 26..269 27..280 200 26.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:57:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17163-PA 460 GD17163-PA 1..460 14..473 2313 95 Plus
Dsim\GD22975-PA 505 GD22975-PA 29..268 25..282 278 29.9 Plus
Dsim\GD24181-PA 396 GD24181-PA 26..272 27..283 201 25.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:57:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19062-PA 137 GJ19062-PA 1..110 127..236 476 83.6 Plus
Dvir\GJ19061-PA 109 GJ19061-PA 1..107 14..120 453 82.2 Plus
Dvir\GJ17247-PA 504 GJ17247-PA 26..265 25..282 255 29.1 Plus
Dvir\GJ17945-PA 399 GJ17945-PA 25..271 27..301 208 25.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10156-PA 458 GK10156-PA 1..457 14..472 2003 82 Plus
Dwil\GK21069-PA 519 GK21069-PA 24..274 18..286 271 29.8 Plus
Dwil\GK14658-PA 404 GK14658-PA 30..284 27..288 239 25.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17129-PA 473 GE17129-PA 1..473 1..473 2461 97.3 Plus
Dyak\GE16327-PA 505 GE16327-PA 29..268 25..282 278 30.7 Plus
Dyak\GE13230-PA 395 GE13230-PA 26..250 27..264 198 26.5 Plus