BDGP Sequence Production Resources |
Search the DGRC for GH10293
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 102 |
Well: | 93 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6980-RA |
Protein status: | GH10293.pep: gold |
Preliminary Size: | 992 |
Sequenced Size: | 915 |
Gene | Date | Evidence |
---|---|---|
CG6980 | 2001-01-01 | Release 2 assignment |
CG6980 | 2002-06-12 | Blastp of sequenced clone |
CG6980 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6980 | 2008-04-29 | Release 5.5 accounting |
CG6980 | 2008-08-15 | Release 5.9 accounting |
CG6980 | 2008-12-18 | 5.12 accounting |
915 bp (915 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122104
> GH10293.complete ATCTTAACTAAATTTCTATTCCTTACATCTTTAAAATGGCAAACGAAGAG GTTAAAGACAATGCCCAACTTAAGGCAACTATGTTAAACTGCAATTTGAA CCCCAGTGTCGCGGATGATTTTGCTGAGTTCGAGGCAACCCTTGCGAAGA TCGATTGTATACTGCAGAACAAGGCACCCTGTGACGATGAAGATTCAAAG GCAGGTGGCGATGCCAAGGAGAAGATCAACTTTGACAACTTGGATGTGGA TAAGGTGCGGCTTAAAGTGAAAGAAAATCGAACAGTCATCAACAGAAAGT CTCTAGAAGAAGACAATGAGAAGCAAGTCAAGGATATGAACCAGAAGAGT TTCATGGAGCAGGTGGAGAAGGATGCCAATGATCGTGCAGAGGCACGTGC CAAAGCCGAATACGAAGCAGAACTACAGAGAAGTCAGGGAAACGAAGCAT TTCGCAGCCAGAAGTACGAGAAGGCAATCCTACATTATGACAAGGCTATC ATCAAAGTTAAGGACAGCGCTATTACATATTGCAATCGCGCCTTGTGCTA CATCAAGCTACAGAACTATAAGCGCGCCCTCAAGGACTGCCAGTACGTGT TGGAGAAGCTGCAGGAGAGTAATCTCCGCGCCTGGCTCTACCAGGCCCAC GCCTACAAGGGTTTGAAACAAGACGACAAGTTCGAGGAAAGCGTGGTCAA GGCACGTGAACACAATCCCAAGCAACTGGCGTACATTGACAAGTACATTA AGCAACTGGAAGCCGATCTTAAAGCACTAGAAATATAACTTATTTAATTT TGCATTATATACTCACTCAGCATAAGCATGACACCCAAAAACGAGACACA CGAATAAAGAAACGGCAGGTGAACACTGCCCAAATCTGTGAAGCATGAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20630890..20631322 | 1..433 | 2165 | 100 | Plus |
chr3R | 27901430 | chr3R | 20631573..20631913 | 557..897 | 1645 | 98.8 | Plus |
chr3R | 27901430 | chr3R | 20631379..20631504 | 432..557 | 615 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24807651..24808083 | 1..433 | 2165 | 100 | Plus |
3R | 32079331 | 3R | 24808337..24808681 | 557..901 | 1725 | 100 | Plus |
3R | 32079331 | 3R | 24808140..24808265 | 432..557 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24548482..24548914 | 1..433 | 2165 | 100 | Plus |
3R | 31820162 | 3R | 24549168..24549512 | 557..901 | 1725 | 100 | Plus |
3R | 31820162 | 3R | 24548971..24549096 | 432..557 | 630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20630890..20631322 | 1..433 | 100 | -> | Plus |
chr3R | 20631381..20631503 | 434..556 | 99 | -> | Plus |
chr3R | 20631573..20631913 | 557..897 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6980-RA | 1..753 | 36..788 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6980-RA | 1..753 | 36..788 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6980-RA | 1..753 | 36..788 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6980-RA | 1..753 | 36..788 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6980-RA | 1..753 | 36..788 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6980-RA | 41..937 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6980-RA | 41..937 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6980-RA | 31..927 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6980-RA | 41..937 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6980-RA | 31..927 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24808142..24808264 | 434..556 | 100 | -> | Plus |
3R | 24807651..24808083 | 1..433 | 100 | -> | Plus |
3R | 24808337..24808677 | 557..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24808142..24808264 | 434..556 | 100 | -> | Plus |
3R | 24807651..24808083 | 1..433 | 100 | -> | Plus |
3R | 24808337..24808677 | 557..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24808142..24808264 | 434..556 | 100 | -> | Plus |
3R | 24807651..24808083 | 1..433 | 100 | -> | Plus |
3R | 24808337..24808677 | 557..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20633373..20633805 | 1..433 | 100 | -> | Plus |
arm_3R | 20633864..20633986 | 434..556 | 100 | -> | Plus |
arm_3R | 20634059..20634399 | 557..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24548973..24549095 | 434..556 | 100 | -> | Plus |
3R | 24549168..24549508 | 557..897 | 100 | Plus | |
3R | 24548482..24548914 | 1..433 | 100 | -> | Plus |
Translation from 35 to 787
> GH10293.hyp MANEEVKDNAQLKATMLNCNLNPSVADDFAEFEATLAKIDCILQNKAPCD DEDSKAGGDAKEKINFDNLDVDKVRLKVKENRTVINRKSLEEDNEKQVKD MNQKSFMEQVEKDANDRAEARAKAEYEAELQRSQGNEAFRSQKYEKAILH YDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVLEKLQESNLRAW LYQAHAYKGLKQDDKFEESVVKAREHNPKQLAYIDKYIKQLEADLKALEI *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6980-PA | 250 | CG6980-PA | 1..250 | 1..250 | 1283 | 100 | Plus |
CG34297-PA | 233 | CG34297-PA | 6..233 | 22..242 | 353 | 34.3 | Plus |
CG34274-PA | 250 | CG34274-PA | 64..248 | 59..243 | 308 | 35.1 | Plus |
CG31294-PA | 225 | CG31294-PA | 38..224 | 52..244 | 288 | 35.4 | Plus |
Hop-PA | 490 | CG2720-PA | 264..418 | 93..237 | 175 | 30.8 | Plus |
Translation from 35 to 787
> GH10293.pep MANEEVKDNAQLKATMLNCNLNPSVADDFAEFEATLAKIDCILQNKAPCD DEDSKAGGDAKEKINFDNLDVDKVRLKVKENRTVINRKSLEEDNEKQVKD MNQKSFMEQVEKDANDRAEARAKAEYEAELQRSQGNEAFRSQKYEKAILH YDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVLEKLQESNLRAW LYQAHAYKGLKQDDKFEESVVKAREHNPKQLAYIDKYIKQLEADLKALEI *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16241-PA | 247 | GF16241-PA | 1..245 | 1..244 | 763 | 66.1 | Plus |
Dana\GF17796-PA | 237 | GF17796-PA | 97..237 | 105..245 | 328 | 46.8 | Plus |
Dana\GF18534-PA | 242 | GF18534-PA | 77..242 | 81..245 | 324 | 36.1 | Plus |
Dana\GF16481-PA | 225 | GF16481-PA | 62..225 | 85..245 | 253 | 37.2 | Plus |
Dana\GF20636-PA | 489 | GF20636-PA | 316..405 | 135..225 | 145 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11320-PA | 244 | GG11320-PA | 1..244 | 1..245 | 1099 | 86.1 | Plus |
Dere\GG10246-PA | 233 | GG10246-PA | 96..232 | 105..241 | 323 | 47.4 | Plus |
Dere\GG20410-PA | 225 | GG20410-PA | 74..225 | 96..245 | 284 | 41.4 | Plus |
Dere\GG16942-PA | 250 | GG16942-PA | 105..250 | 100..245 | 281 | 39.7 | Plus |
Dere\GG24711-PA | 490 | GG24711-PA | 310..418 | 128..237 | 155 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19113-PA | 219 | GH19113-PA | 7..216 | 27..242 | 681 | 63 | Plus |
Dgri\GH19482-PA | 216 | GH19482-PA | 6..214 | 22..243 | 305 | 31.1 | Plus |
Dgri\GH18212-PA | 234 | GH18212-PA | 19..234 | 23..245 | 263 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6980-PA | 250 | CG6980-PA | 1..250 | 1..250 | 1283 | 100 | Plus |
CG34297-PA | 233 | CG34297-PA | 6..233 | 22..242 | 353 | 34.3 | Plus |
CG34274-PA | 250 | CG34274-PA | 64..248 | 59..243 | 308 | 35.1 | Plus |
CG31294-PA | 225 | CG31294-PA | 38..224 | 52..244 | 288 | 35.4 | Plus |
Stip1-PA | 490 | CG2720-PA | 264..418 | 93..237 | 175 | 30.8 | Plus |
unc-45-PB | 947 | CG2708-PB | 12..103 | 127..219 | 154 | 39.6 | Plus |
unc-45-PA | 947 | CG2708-PA | 12..103 | 127..219 | 154 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23567-PA | 209 | GI23567-PA | 10..206 | 27..242 | 580 | 57.4 | Plus |
Dmoj\GI13995-PA | 206 | GI13995-PA | 60..202 | 99..241 | 324 | 43.4 | Plus |
Dmoj\GI24720-PA | 233 | GI24720-PA | 87..229 | 99..241 | 323 | 43.4 | Plus |
Dmoj\GI10166-PA | 244 | GI10166-PA | 99..244 | 100..245 | 286 | 35.6 | Plus |
Dmoj\GI22588-PA | 226 | GI22588-PA | 78..226 | 97..245 | 275 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13629-PA | 226 | GL13629-PA | 7..225 | 27..244 | 764 | 68.8 | Plus |
Dper\GL22045-PA | 232 | GL22045-PA | 95..231 | 105..241 | 317 | 47.4 | Plus |
Dper\GL12700-PA | 246 | GL12700-PA | 36..246 | 22..245 | 290 | 31.3 | Plus |
Dper\GL11931-PA | 225 | GL11931-PA | 75..225 | 97..245 | 212 | 33.1 | Plus |
Dper\GL25924-PA | 531 | GL25924-PA | 309..417 | 128..237 | 160 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20001-PA | 226 | GA20001-PA | 7..225 | 27..244 | 764 | 68.8 | Plus |
Dpse\GA27357-PA | 232 | GA27357-PA | 95..231 | 105..241 | 317 | 47.4 | Plus |
Dpse\GA27592-PA | 246 | GA27592-PA | 36..246 | 22..245 | 289 | 31.3 | Plus |
Dpse\GA16156-PA | 225 | GA16156-PA | 78..225 | 100..245 | 212 | 33.8 | Plus |
Dpse\GA15447-PA | 489 | GA15447-PA | 309..417 | 128..237 | 159 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26628-PA | 245 | GM26628-PA | 1..244 | 1..244 | 1209 | 94.7 | Plus |
Dsec\GM10528-PA | 239 | GM10528-PA | 102..238 | 105..241 | 322 | 46.7 | Plus |
Dsec\GM24250-PA | 193 | GM24250-PA | 25..193 | 78..245 | 304 | 37.9 | Plus |
Dsec\GM25756-PA | 218 | GM25756-PA | 74..218 | 96..245 | 235 | 36.8 | Plus |
Dsec\GM15022-PA | 214 | GM15022-PA | 34..142 | 128..237 | 156 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21131-PA | 245 | GD21131-PA | 1..244 | 1..244 | 1203 | 94.3 | Plus |
Dsim\GD19039-PA | 248 | GD19039-PA | 84..248 | 82..245 | 300 | 38.8 | Plus |
Dsim\GD19523-PA | 298 | GD19523-PA | 96..217 | 105..226 | 278 | 45.9 | Plus |
Dsim\GD20333-PA | 225 | GD20333-PA | 74..225 | 96..245 | 274 | 40.1 | Plus |
Dsim\Hop-PA | 490 | GD23015-PA | 310..418 | 128..237 | 155 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23542-PA | 139 | GJ23542-PA | 1..135 | 107..241 | 512 | 71.1 | Plus |
Dvir\GJ23936-PA | 219 | GJ23936-PA | 78..216 | 105..243 | 319 | 44.6 | Plus |
Dvir\GJ10868-PA | 232 | GJ10868-PA | 84..231 | 96..243 | 285 | 36.5 | Plus |
Dvir\GJ10310-PA | 229 | GJ10310-PA | 85..229 | 101..245 | 264 | 38.6 | Plus |
Dvir\GJ10309-PA | 228 | GJ10309-PA | 17..228 | 23..245 | 222 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14108-PA | 225 | GK14108-PA | 8..225 | 28..245 | 679 | 59.8 | Plus |
Dwil\GK10830-PA | 229 | GK10830-PA | 6..227 | 22..241 | 332 | 35.7 | Plus |
Dwil\GK11411-PA | 229 | GK11411-PA | 47..229 | 71..245 | 298 | 36.6 | Plus |
Dwil\GK11681-PA | 232 | GK11681-PA | 44..232 | 59..245 | 251 | 33.9 | Plus |
Dwil\GK18373-PA | 492 | GK18373-PA | 312..420 | 128..237 | 157 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23516-PA | 244 | GE23516-PA | 1..244 | 1..245 | 1099 | 85.3 | Plus |
Dyak\GE25831-PA | 131 | GE25831-PA | 2..131 | 113..242 | 290 | 44.6 | Plus |
Dyak\GE26363-PA | 225 | GE26363-PA | 74..225 | 96..245 | 286 | 42.8 | Plus |
Dyak\GE24329-PA | 250 | GE24329-PA | 105..250 | 100..245 | 281 | 39.7 | Plus |
Dyak\Hop-PA | 490 | GE16725-PA | 310..418 | 128..237 | 153 | 32.7 | Plus |