BDGP Sequence Production Resources |
Search the DGRC for GH10333
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 103 |
Well: | 33 |
Vector: | pOT2 |
Associated Gene/Transcript | NELF-B-RA |
Protein status: | GH10333.pep: gold |
Preliminary Size: | 2205 |
Sequenced Size: | 2207 |
Gene | Date | Evidence |
---|---|---|
CG32721 | 2000-02-14 | Blastp of sequenced clone |
CG12152 | 2001-01-01 | Release 2 assignment |
CG32721 | 2003-01-01 | Sim4 clustering to Release 3 |
NELF-B | 2008-04-29 | Release 5.5 accounting |
NELF-B | 2008-08-15 | Release 5.9 accounting |
NELF-B | 2008-12-18 | 5.12 accounting |
2207 bp (2207 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145659
> GH10333.complete GGGTTCGTGTCTTGTTTTGCTCAATTTGCCGACGAATTGCATGATAATGA GCACACCGGCGAAAAATAACAATGGAACTGGACTGGAGGACGTGAATATT CCGGGTCAGGCCTATCTGCGCGAGGCCCTGACCTCCTGCACTGATCCCTT GAAGGCCATCGAGAGTTTTCAGCTTGAGAATGGTGTATTGCTGCCTTCAC TGCGCCCCATGTTGCCTTTACTCGATTTGCACGGCGTGCGTCGACTGGAC TTTCATACCTCGCTGATGGAGGAGCTGCGCGACAAGCTGATAGCTCACAT CAACGAGATGGGCCAAAAGGAGCCCCGGGAGCGGGACAAGAAGCTCAAGG AGCTGCTCGTTAAGAGCTTCCCCGTCGTTCGGGTGAAGTCGCTGCGGCCC GTGGTCATGGCCATATTGAGGAATACCCAGCACATCGATGACAAGTACCT CAAAATCCTTGTAAGGGATCGGGAACTGTATGCGGACACGGATACGGAAG TTAAGCGGCAGATATGGCGTGATAATCAATCGTTGTTTGGTGACGAGGTG TCGCCTCTCCTCTCACAATATATTCGCGAGAAGGAGCACATCCTGTTTGA TCACACCAACTTGAACAATCTGTTCTTCCACCCAACGCCCAAGGTGCGAA GGCAGGGGGAAGTAGTCCAAAAGTTGGCCAACATGATTGGCACCAGTGTC AAGCTGTACGATATGGTGCTGCAGTTCCTGCGCACTCTATTCCTGCGCAC CCGCAATGTTCACTATTGCACGCTGCGTGCAGAGCTACTGATGGCCTTAC ACGATCTCGAGGTGCAGGAGATCATCTCGATAGATCCCTGTCACAAGTTC ACCTGGTGCCTGGACGCCTGCATAAGGGAGAAGAATGTGGACATTAAACG TTCACGGGAGCTCCAGGGATTTCTTGACAACATCAAGCGCGGTCAGGAGC AGGTTCTGGGCGATCTGTCCATGACTTTGTGCGATCCGTATGCCATCAAC TTTTTGGCCACGTCGGCCATCAAGATATTGCATCACTTGATCAACAACGA GGGCATGCCGCGTGACAATCAGATACTCATCCTGTTGTTGAGAATGTTGG CCTTGGGCTTGAGTGCCTGGGTGATGATCGATTCGCAAGACTTTAAGGAG CCCAAACTTGATTGCCAGGTGGTCACCAAGTTTTTGCCCGCCCTCATGTC GTTAATGGTTGACGACCAGTGCCGCAGCTTGCACGCGAAACTACCGCCGG ACGAGCGTGAATCTGCTCTGACCACCATCGAGCATTCGGGACCGGCACCG GATGCCGTGGAGGCGTACATTCAAGAGAGTTCCGTGGCCAGCATATTGGC CATGTACTATACGCTGCACACGGCGCGCCTGAAGGATCGCGTGGGCGTGT TGCGCGTCTTGGCCATTCTGTCCGCCTGCAAAGACGACCGCGCATATGAG GATCCCTTCCTGCACTCTCTGATTGCCCTGCTCATCCCCATGAGCGAAGA GTTTGCCACGGAGGACTTCTGCACCACGCTCTTCGACGAGTTCATCTTTG CCGGACTGACGCGCGAGAATGTGACCTCTCGTCACATGCTGAAACTTTTG TGGTATGTGCACAATAAGCTGCCCGCCGGTCGTTTGGCCACATTGATGAA GGCTATGCAGCCGACGACGGCCCACAACGAGCACATCCACAAGTTGTACG AAATTCTGCAGGAGAGAATCGGCACCGGGGCGGCGGAGACGCCGGTCATT GAAGCGCCGCCCATGGAGTTTGATTCGCCGCTAAAGAGTGTGCCAACGCC AGGACCGCACTATAATGTCCAATAGCTAGAGGCACCGGCAGTCGCACCAC CTGCGGCTGTCGTCGGATGATGATGGTTATTTGTGATGATGATGTTGATG TTGATGATGATGATCGGAGGCCATGTATGTGGCTACCTCATATACTTCTC TGGAGCAGCCGACCGGATGGCAATCCCCAATTAGCATGCTTGCGCAAATA ATAATTCTACTGTTTAGACTAAACATAAAGCACTGCGACCGAGCAATCGG ATATAGTTTACATATTTACAGAATGTATGGCTTTGTTGGCAGGCATCAAT CAGTTGTCGCTGGCTATTATATATATTATATATTACTGTTACGCTAGTGT AACGATCGATTCTAGTACACAATATAGAGTACAAATCTAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NELF-B-RA | 2258 | NELF-B-RA | 72..2258 | 4..2190 | 10935 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 7618705..7620010 | 1471..166 | 6515 | 99.9 | Minus |
chrX | 22417052 | chrX | 7617926..7618643 | 2188..1471 | 3590 | 100 | Minus |
chrX | 22417052 | chrX | 7620082..7620250 | 172..4 | 845 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 7620082..7620252 | 1..172 | 98 | Minus | |
chrX | 7618705..7620003 | 173..1471 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NELF-B-RA | 1..1785 | 41..1825 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NELF-B-RA | 1..1785 | 41..1825 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NELF-B-RA | 1..1785 | 41..1825 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NELF-B-RA | 1..1785 | 41..1825 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NELF-B-RA | 1..1785 | 41..1825 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NELF-B-RA | 1..2187 | 3..2188 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NELF-B-RA | 1..2187 | 3..2188 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NELF-B-RA | 39..2226 | 1..2188 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NELF-B-RA | 1..2187 | 3..2188 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NELF-B-RA | 39..2226 | 1..2188 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7725996..7726712 | 1472..2188 | 100 | <- | Minus |
X | 7726775..7728073 | 173..1471 | 100 | <- | Minus |
X | 7728152..7728322 | 1..172 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7725996..7726712 | 1472..2188 | 100 | <- | Minus |
X | 7726775..7728073 | 173..1471 | 100 | <- | Minus |
X | 7728152..7728322 | 1..172 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7725996..7726712 | 1472..2188 | 100 | <- | Minus |
X | 7726775..7728073 | 173..1471 | 100 | <- | Minus |
X | 7728152..7728322 | 1..172 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 7620029..7620745 | 1472..2188 | 100 | <- | Minus |
arm_X | 7620808..7622106 | 173..1471 | 100 | <- | Minus |
arm_X | 7622185..7622355 | 1..172 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7734094..7734810 | 1472..2188 | 100 | <- | Minus |
X | 7734873..7736171 | 173..1471 | 100 | <- | Minus |
X | 7736250..7736420 | 1..172 | 98 | Minus |
Translation from 1 to 1824
> GH10333.hyp ASCLVLLNLPTNCMIMSTPAKNNNGTGLEDVNIPGQAYLREALTSCTDPL KAIESFQLENGVLLPSLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHI NEMGQKEPRERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYL KILVRDRELYADTDTEVKRQIWRDNQSLFGDEVSPLLSQYIREKEHILFD HTNLNNLFFHPTPKVRRQGEVVQKLANMIGTSVKLYDMVLQFLRTLFLRT RNVHYCTLRAELLMALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKR SRELQGFLDNIKRGQEQVLGDLSMTLCDPYAINFLATSAIKILHHLINNE GMPRDNQILILLLRMLALGLSAWVMIDSQDFKEPKLDCQVVTKFLPALMS LMVDDQCRSLHAKLPPDERESALTTIEHSGPAPDAVEAYIQESSVASILA MYYTLHTARLKDRVGVLRVLAILSACKDDRAYEDPFLHSLIALLIPMSEE FATEDFCTTLFDEFIFAGLTRENVTSRHMLKLLWYVHNKLPAGRLATLMK AMQPTTAHNEHIHKLYEILQERIGTGAAETPVIEAPPMEFDSPLKSVPTP GPHYNVQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NELF-B-PA | 594 | CG32721-PA | 1..594 | 14..607 | 3070 | 100 | Plus |
Translation from 40 to 1824
> GH10333.pep MIMSTPAKNNNGTGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVL LPSLRPMLPLLDLHGVRRLDFHTSLMEELRDKLIAHINEMGQKEPRERDK KLKELLVKSFPVVRVKSLRPVVMAILRNTQHIDDKYLKILVRDRELYADT DTEVKRQIWRDNQSLFGDEVSPLLSQYIREKEHILFDHTNLNNLFFHPTP KVRRQGEVVQKLANMIGTSVKLYDMVLQFLRTLFLRTRNVHYCTLRAELL MALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQGFLDNIKR GQEQVLGDLSMTLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILLL RMLALGLSAWVMIDSQDFKEPKLDCQVVTKFLPALMSLMVDDQCRSLHAK LPPDERESALTTIEHSGPAPDAVEAYIQESSVASILAMYYTLHTARLKDR VGVLRVLAILSACKDDRAYEDPFLHSLIALLIPMSEEFATEDFCTTLFDE FIFAGLTRENVTSRHMLKLLWYVHNKLPAGRLATLMKAMQPTTAHNEHIH KLYEILQERIGTGAAETPVIEAPPMEFDSPLKSVPTPGPHYNVQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21119-PA | 591 | GF21119-PA | 1..591 | 3..594 | 3084 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17612-PA | 592 | GG17612-PA | 1..592 | 3..594 | 3141 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12128-PA | 598 | GH12128-PA | 1..598 | 3..594 | 2903 | 93 | Plus |
Dgri\GH18941-PA | 592 | GH18941-PA | 1..592 | 3..594 | 2893 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NELF-B-PA | 594 | CG32721-PA | 1..594 | 1..594 | 3070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24199-PA | 595 | GI24199-PA | 1..595 | 3..594 | 2889 | 93.1 | Plus |
Dmoj\GI16340-PA | 587 | GI16340-PA | 1..587 | 3..594 | 2870 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14601-PA | 590 | GL14601-PA | 1..590 | 3..594 | 3026 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17103-PA | 590 | GA17103-PA | 1..590 | 3..594 | 2957 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17461-PA | 592 | GM17461-PA | 1..592 | 3..594 | 3152 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24126-PA | 592 | GJ24126-PA | 1..592 | 3..594 | 2936 | 95.1 | Plus |
Dvir\GJ15676-PA | 631 | GJ15676-PA | 1..631 | 3..594 | 2811 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25347-PA | 426 | GK25347-PA | 198..426 | 366..594 | 1178 | 95.2 | Plus |
Dwil\GK25347-PA | 426 | GK25347-PA | 1..198 | 3..201 | 1033 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17513-PA | 595 | GE17513-PA | 1..595 | 3..594 | 3112 | 98.7 | Plus |