BDGP Sequence Production Resources |
Search the DGRC for GH10365
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 103 |
Well: | 65 |
Vector: | pOT2 |
Associated Gene/Transcript | Jupiter-RB |
Protein status: | GH10365.pep: gold |
Preliminary Size: | 994 |
Sequenced Size: | 889 |
Gene | Date | Evidence |
---|---|---|
CG31363 | 2001-11-29 | Blastp of sequenced clone |
Jupiter | 2008-04-29 | Release 5.5 accounting |
Jupiter | 2008-08-15 | Release 5.9 accounting |
Jupiter | 2008-12-18 | 5.12 accounting |
889 bp (889 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069089
> GH10365.complete TTGCTACACCGATCAAAACCAAAGCGCTTGAAAACAAAATTGTATTCAAC GAAATAAGTTGTGCATTTATAAATATCTATATATATATATATTTTTTACT GCACACGCACGCACTATAAACGTTAAATCTCAAAATCGTGTCAAACCAAC CAACCAACCAACCGACCAATCCACGAACAATAACCAATTGTGTCTGTTGA ATCGTATCGCGTCAGTCTTCCGCAATATGAGCACAAGACCAGACACCAAA GAAACATCCCCACGCGTATCCTTGTGTCCCCCAGAACCGGCTCGAACCGA AACGCCAATTCCACCGGCTGACGACGCCCTATCCATTGATAACTCGTGCC GAGATAGCGAAGTTGGAGACGTGCCGGCAGATAACAGCACAGTCACAAAG TCCGATCAGGTGAACGAGGGCTGTCAAACTCGGCGAGACTCTGGAAATAA TCCCGAACAGCCATACTCGCTGAACAAGATGGCAGGCGTGAGCAATGTAA AGGAGCCCCTTGGGCTCTGTCCAAACGAGATTAAGGAGGAGCAGCAGGCG TGCTCCAAACTCGATTCACGCAATCCGATCACGGGCCTCGGCCTCAACGG AGATGGTGTTGGCGGCCTCAAGCCCAAGAAGCTAAAGATCCGAGAGGGCA ACCCCGTCACAGGCGAGGGCTACAAGGTCGTAGCCAACGAGTATTCCCAG CGCCAGGAGTCGTCCAATGGCGGCACTCCGGTGATCAACAAGAACCGCAT TCCCCCAGGCGGCTACTCGTCGGGCCTGTGGTAATGACAGCCGGAATTGC TCAGATCCCAGCACAAGCAATTGAGGAGCCGATGGCGGGACGAGACACTA TAAGAAAAAAAAAAAACCAACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7416992..7417402 | 644..234 | 2055 | 100 | Minus |
chr3R | 27901430 | chr3R | 7417486..7417718 | 233..1 | 1165 | 100 | Minus |
chr3R | 27901430 | chr3R | 7416572..7416800 | 871..643 | 1145 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 11591501..11591911 | 644..234 | 2055 | 100 | Minus |
3R | 32079331 | 3R | 11591064..11591309 | 888..643 | 1185 | 98.8 | Minus |
3R | 32079331 | 3R | 11591995..11592227 | 233..1 | 1165 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 11332332..11332742 | 644..234 | 2055 | 100 | Minus |
3R | 31820162 | 3R | 11331895..11332140 | 888..643 | 1185 | 98.7 | Minus |
3R | 31820162 | 3R | 11332826..11333058 | 233..1 | 1165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7416589..7416798 | 645..854 | 100 | <- | Minus |
chr3R | 7416992..7417402 | 234..644 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jupiter-RB | 1..558 | 227..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jupiter-RB | 1..558 | 227..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jupiter-RB | 1..558 | 227..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jupiter-RB | 1..558 | 227..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jupiter-RB | 1..558 | 227..784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jupiter-RB | 18..871 | 1..854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jupiter-RB | 18..871 | 1..854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jupiter-RB | 18..871 | 1..854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jupiter-RB | 18..871 | 1..854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jupiter-RB | 18..871 | 1..854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11591098..11591307 | 645..854 | 100 | <- | Minus |
3R | 11591501..11591911 | 234..644 | 100 | <- | Minus |
3R | 11591995..11592227 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11591098..11591307 | 645..854 | 100 | <- | Minus |
3R | 11591501..11591911 | 234..644 | 100 | <- | Minus |
3R | 11591995..11592227 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11591098..11591307 | 645..854 | 100 | <- | Minus |
3R | 11591501..11591911 | 234..644 | 100 | <- | Minus |
3R | 11591995..11592227 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7416820..7417029 | 645..854 | 100 | <- | Minus |
arm_3R | 7417223..7417633 | 234..644 | 100 | <- | Minus |
arm_3R | 7417717..7417949 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11331929..11332138 | 645..854 | 100 | <- | Minus |
3R | 11332332..11332742 | 234..644 | 100 | <- | Minus |
3R | 11332826..11333058 | 1..233 | 100 | Minus |
Translation from 226 to 783
> GH10365.hyp MSTRPDTKETSPRVSLCPPEPARTETPIPPADDALSIDNSCRDSEVGDVP ADNSTVTKSDQVNEGCQTRRDSGNNPEQPYSLNKMAGVSNVKEPLGLCPN EIKEEQQACSKLDSRNPITGLGLNGDGVGGLKPKKLKIREGNPVTGEGYK VVANEYSQRQESSNGGTPVINKNRIPPGGYSSGLW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Jupiter-PB | 185 | CG31363-PB | 1..185 | 1..185 | 987 | 100 | Plus |
Jupiter-PI | 105 | CG31363-PI | 52..105 | 132..185 | 255 | 88.9 | Plus |
Jupiter-PD | 191 | CG31363-PD | 146..191 | 140..185 | 250 | 100 | Plus |
Jupiter-PC | 197 | CG31363-PC | 152..197 | 140..185 | 250 | 100 | Plus |
Jupiter-PH | 202 | CG31363-PH | 157..202 | 140..185 | 250 | 100 | Plus |
Translation from 226 to 783
> GH10365.pep MSTRPDTKETSPRVSLCPPEPARTETPIPPADDALSIDNSCRDSEVGDVP ADNSTVTKSDQVNEGCQTRRDSGNNPEQPYSLNKMAGVSNVKEPLGLCPN EIKEEQQACSKLDSRNPITGLGLNGDGVGGLKPKKLKIREGNPVTGEGYK VVANEYSQRQESSNGGTPVINKNRIPPGGYSSGLW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16635-PA | 354 | GF16635-PA | 203..354 | 33..185 | 536 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17211-PA | 345 | GG17211-PA | 162..345 | 1..185 | 807 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12623-PA | 227 | GH12623-PA | 89..227 | 44..185 | 254 | 42.2 | Plus |
Dgri\GH17288-PA | 207 | GH17288-PA | 162..207 | 140..185 | 172 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Jupiter-PB | 185 | CG31363-PB | 1..185 | 1..185 | 987 | 100 | Plus |
Jupiter-PI | 105 | CG31363-PI | 52..105 | 132..185 | 255 | 88.9 | Plus |
Jupiter-PD | 191 | CG31363-PD | 146..191 | 140..185 | 250 | 100 | Plus |
Jupiter-PC | 197 | CG31363-PC | 152..197 | 140..185 | 250 | 100 | Plus |
Jupiter-PH | 202 | CG31363-PH | 157..202 | 140..185 | 250 | 100 | Plus |
Jupiter-PE | 208 | CG31363-PE | 163..208 | 140..185 | 250 | 100 | Plus |
Jupiter-PA | 197 | CG31363-PA | 152..197 | 140..185 | 246 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11035-PA | 190 | GI11035-PA | 6..190 | 5..185 | 401 | 47.6 | Plus |
Dmoj\GI11848-PA | 78 | GI11848-PA | 19..56 | 112..149 | 157 | 84.2 | Plus |
Dmoj\GI23754-PA | 203 | GI23754-PA | 159..203 | 140..185 | 157 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12395-PA | 361 | GL12395-PA | 172..361 | 1..185 | 461 | 53.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22255-PA | 193 | GA22255-PA | 35..193 | 33..185 | 453 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26090-PA | 315 | GM26090-PA | 152..315 | 20..185 | 813 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15110-PA | 183 | GD15110-PA | 1..183 | 1..185 | 881 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15816-PA | 195 | GJ15816-PA | 32..195 | 30..185 | 417 | 54.1 | Plus |
Dvir\GJ13546-PA | 84 | GJ13546-PA | 28..64 | 114..150 | 160 | 86.5 | Plus |
Dvir\GJ10600-PA | 205 | GJ10600-PA | 162..205 | 140..185 | 155 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11035-PA | 368 | GK11035-PA | 205..368 | 27..185 | 410 | 53.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10105-PA | 347 | GE10105-PA | 162..347 | 1..185 | 801 | 83.4 | Plus |