BDGP Sequence Production Resources |
Search the DGRC for GH10422
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 104 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | viaf-RA |
Protein status: | GH10422.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1171 |
Gene | Date | Evidence |
---|---|---|
CG18593 | 2001-01-01 | Release 2 assignment |
CG18593 | 2002-06-12 | Blastp of sequenced clone |
CG18593 | 2003-01-01 | Sim4 clustering to Release 3 |
viaf | 2008-04-29 | Release 5.5 accounting |
viaf | 2008-08-15 | Release 5.9 accounting |
viaf | 2008-12-18 | 5.12 accounting |
1171 bp (1171 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122105
> GH10422.complete TCACTTCGTGTAGAATAATTCAGTTTTATTTTTAGTTTATAAAAGCGCTG CACGCGATCAAGAATTTTATATTTTTAAGTAATTTATTTCATCGAACTAT AATCAAAAAACATGCAGGACCCAAACGAAGATACCGAGTGGAATGATGTG CTCCGAGCCAAGGGAATAATTGGGCCCAAGGCGAAGGAGGCGGAGATCAC AGAGGATCAGATCCAGAAGCTGATGGACGATGCCATCCAGCGGCGCACAG ATCTGCCACTGAATGAAGGCCAGCGCGACAAGAAGATCGACGACATGTCG CTGGACGAACTCGACGAACTGGAGGATTCCGAGGACGAGGCTGTTCTAGA GCAGTATCGCCAGCGACGCATCGCCGAGATGAGGGCCACCGCTGAAAAGG CGCGATTTGGATCAGTGCGCGAGATCTCAGGACAGGATTATGTCAACGAG GTAACCAAGGCCGGCGAGGGCATCTGGGTGGTACTCCACCTGTATGCCAA CGGCGTACCGCTGTGCGCACTGATCCACCATCACATGCAGCAGCTGGCCG TCCGCTTTCCACAGACCAAGTTCGTGCGCTCCGTTGCCACCACCTGCATA CCAAACTTCCCCGAGAAGAACCTGCCCACCATCTTTATCTACCACGAGGG TGCGCTGCGCAAGCAGTACATAGGCCCACTGGAGCTGCGCGGCGACAAGT TGACCGCTGAGGAGCTGGAGTTTATGCTGGGTCAGGCGGGAGCAGTGCCC ACCGAGATCACGGAGGATCCACGGCCGCAGATCAGGGACAAGATGCTTGC CGATCTCGAAGACAAAAGCTCGGACTTCTACTGAGTCATAGCCAAAGCAT AGCCCTCATCCAACTTTAAGTTCAGTGGGGTGGGTAAATATTTTTAGGAT GAATCATCAAGTAAAGCCCAATCCAAAACCGGCAAGCGGATCTTTTTTTG CGGATTCACTTAACTAACAAATCAAACATTTAAACGCAGTTTGAAACGTA AACATCCGCCGTTGAGAGCGAACGTTATTGATTTATATATTAACCAGTCC TCAGGAATTTCCCTTGCACGTTTTCATTTCATTGTTTTTTGGCATTTATG TACCCTCATAAATAAATTGTTTACTTTTCTACAGAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11982665..11983681 | 118..1134 | 99 | <- | Minus |
chr3L | 11983851..11983967 | 1..117 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
viaf-RA | 1..723 | 112..834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
viaf-RA | 1..723 | 112..834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
viaf-RA | 1..723 | 112..834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
viaf-RA | 1..723 | 112..834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
viaf-RA | 1..723 | 112..834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
viaf-RA | 25..1158 | 1..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
viaf-RA | 25..1158 | 1..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
viaf-RA | 25..1158 | 1..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
viaf-RA | 25..1158 | 1..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
viaf-RA | 25..1158 | 1..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11991853..11992869 | 118..1134 | 100 | <- | Minus |
3L | 11993039..11993155 | 1..117 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11991853..11992869 | 118..1134 | 100 | <- | Minus |
3L | 11993039..11993155 | 1..117 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11991853..11992869 | 118..1134 | 100 | <- | Minus |
3L | 11993039..11993155 | 1..117 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11984953..11985969 | 118..1134 | 100 | <- | Minus |
arm_3L | 11986139..11986255 | 1..117 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11984953..11985969 | 118..1134 | 100 | <- | Minus |
3L | 11986139..11986255 | 1..117 | 100 | Minus |
Translation from 111 to 833
> GH10422.pep MQDPNEDTEWNDVLRAKGIIGPKAKEAEITEDQIQKLMDDAIQRRTDLPL NEGQRDKKIDDMSLDELDELEDSEDEAVLEQYRQRRIAEMRATAEKARFG SVREISGQDYVNEVTKAGEGIWVVLHLYANGVPLCALIHHHMQQLAVRFP QTKFVRSVATTCIPNFPEKNLPTIFIYHEGALRKQYIGPLELRGDKLTAE ELEFMLGQAGAVPTEITEDPRPQIRDKMLADLEDKSSDFY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24491-PA | 240 | GF24491-PA | 1..240 | 1..240 | 1210 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13862-PA | 240 | GG13862-PA | 1..240 | 1..240 | 1268 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14439-PA | 240 | GH14439-PA | 1..240 | 1..240 | 1169 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
viaf-PA | 240 | CG18593-PA | 1..240 | 1..240 | 1243 | 100 | Plus |
CG7650-PA | 276 | CG7650-PA | 117..269 | 65..212 | 152 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13572-PA | 240 | GI13572-PA | 1..240 | 1..240 | 1172 | 90 | Plus |
Dmoj\GI13629-PA | 282 | GI13629-PA | 123..275 | 65..212 | 143 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25063-PA | 240 | GL25063-PA | 1..240 | 1..240 | 1176 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15005-PA | 240 | GA15005-PA | 1..240 | 1..240 | 1173 | 89.6 | Plus |
Dpse\GA20503-PA | 276 | GA20503-PA | 121..269 | 68..212 | 160 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24686-PA | 240 | GM24686-PA | 1..240 | 1..240 | 1270 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12756-PA | 240 | GD12756-PA | 1..240 | 1..240 | 1270 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13906-PA | 240 | GJ13906-PA | 1..240 | 1..240 | 1184 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17253-PA | 241 | GK17253-PA | 1..241 | 1..240 | 1171 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20155-PA | 240 | GE20155-PA | 1..240 | 1..240 | 1268 | 98.8 | Plus |
Translation from 111 to 833
> GH10422.hyp MQDPNEDTEWNDVLRAKGIIGPKAKEAEITEDQIQKLMDDAIQRRTDLPL NEGQRDKKIDDMSLDELDELEDSEDEAVLEQYRQRRIAEMRATAEKARFG SVREISGQDYVNEVTKAGEGIWVVLHLYANGVPLCALIHHHMQQLAVRFP QTKFVRSVATTCIPNFPEKNLPTIFIYHEGALRKQYIGPLELRGDKLTAE ELEFMLGQAGAVPTEITEDPRPQIRDKMLADLEDKSSDFY*