BDGP Sequence Production Resources |
Search the DGRC for GH10478
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 104 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | CG15309-RA |
Protein status: | GH10478.pep: gold |
Preliminary Size: | 1654 |
Sequenced Size: | 1612 |
Gene | Date | Evidence |
---|---|---|
CG15309 | 2001-01-01 | Release 2 assignment |
CG15309 | 2001-09-19 | Blastp of sequenced clone |
CG15309 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15309 | 2008-04-29 | Release 5.5 accounting |
CG15309 | 2008-08-15 | Release 5.9 accounting |
CG15309 | 2008-12-18 | 5.12 accounting |
1612 bp (1612 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060270
> GH10478.complete AAACAATGCAGATTGCTGCATTATTATACAAGTGAAGAAGAAGAGAGTGC CATTTTCGGCTGCTATTTGTGCACGTCTCTGTGACTGTGTGTGAGTGTGT GCGTGTCGCGTGTGTGCTCTGCGCTGAGGTGTTTGTTGGCGAACGACAGC GAAAGGCGACAAGCAAACAAACAAACAAACAAAACACACAGGACTATTCT TTGGCTGGAATTCAGATATAGCCGGGGATCGGAATCGGGATTGGAATCAG AATTGGAAACGGAATTAAAATCATATATATTCGGATCAAAAATCGCGCGA GGCAAGTGACTTTAAACGCAGAAATCATTGTTCAATGACAGCAGTCGCGG CAGTTTTTACCGCTGTTGCTACTGCATCTGCTGCTGGTCACGCCCCTTCC GAATCCGCCCCCAAAGACGACCCCATTGCCTCGGATAAAGCCAAAGTGCA CAGTTAACAAAGCCCCAAAGCAACCGAAACTGAAAGATTTAGTTGTGGTC CTGGTCACAAGAAAGAGGACCACTTTTAGGACAGACAATCGCAGGAGATT TGCAGTCTATAACGTTCGCATATAGAGGCCCAAAAGAGTCAAGGATATCA TCAACGTCACGATGGTGAAGACGTTTCAGGCCTATCTACCGTCCACGAAT CGGACATACTCATGTGTTCACTGCCGCGCCCACCTCGCCTCCCACGACGA GCTCATATCGAAGTCGTTTCAGGGCAGTCAGGGACCGGCCTATCTGTTCA ACTCGGTGGTGAACGTGGCCTGTGGCCAGACGGAGGAGCGTGTGCTCCTG ACCGGCCTCCATGCGGTGGCGGACATCTACTGCGAGTGCTGCAAGACGCC GCTGGGCTGGAAATATGAGCACGCCTATGAGTCCAGCCAAAAGTACAAGG AGGGCAAGTTCATCATTGAGCTGGCGCACATGATCAAGGAGAACGGCTGG GACTGAAGGGCTGTCCGTTTGGATGGGCTGATTAATCAGAAGCACACCCG TAACAGGAACAGCAGCAACAGCGGCGGCGGCGGCGGCAGCGGCAGGAAAA GCAGCGAGTTCACCACACAAAAAACGAAACACACACGCGGCAAATAAATT GCAGACAAAGAGTGTTTACAAAATGGCTAAAGTCTGGAAAATGCGAACAG AGAACACACAGAGAATAAAGAAGAGGACAATGAAAATGCGAGATCGAGTT TTAGGGTATCACACAATATATATATGCTATTATATAGTGCATAACTCGTC GTATCTTATAGAGCAAAACAAACAAATCAATTAAACACACAGATATACCG CACATTCGATCGAAAAACACACATTACATAAAAAGCTTGATTGGGTTTTT GGGAAGGATCTCTGCGCTGGCCGCCATCTAGGATTTCCGCACTTTCATTT CGATTACCATTACCCACTAATACCACTTTGTTTTCCTTTTACCATTTTGC GTTGCAAGTTTATTCAATTGTGTGTACTTTCTGTGCAAAATTAATTCGAT GCCTTAATTCGATGATATCAAATATAAAACTGGCGAAAGCCACACGCAAA ACAGAACTTGCACTGCCAATCAATAAGAAAAATGTTAAGCATCCAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 10098205..10099286 | 1594..510 | 5330 | 99.6 | Minus |
chrX | 22417052 | chrX | 10099587..10099903 | 511..195 | 1570 | 99.7 | Minus |
chrX | 22417052 | chrX | 10103765..10103958 | 194..1 | 940 | 99 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 10206575..10207677 | 1612..510 | 5500 | 99.9 | Minus |
X | 23542271 | X | 10207978..10208294 | 511..195 | 1585 | 100 | Minus |
X | 23542271 | X | 10212153..10212346 | 194..1 | 970 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 10214673..10215775 | 1612..510 | 5500 | 99.9 | Minus |
X | 23527363 | X | 10216076..10216392 | 511..195 | 1585 | 100 | Minus |
X | 23527363 | X | 10220251..10220444 | 194..1 | 970 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6807..6916 | 985..1093 | 187 | 64.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2446 | 990..1098 | 175 | 64.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6701..6820 | 975..1093 | 164 | 62.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6732..6828 | 985..1081 | 160 | 65.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6753..6852 | 985..1081 | 159 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2309..2395 | 994..1081 | 158 | 65.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2785..2860 | 988..1062 | 152 | 68.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1089..1179 | 985..1071 | 148 | 65.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6774..6848 | 985..1055 | 140 | 69.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1043..1109 | 404..338 | 137 | 67.2 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1095..1141 | 385..339 | 136 | 76.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6825..6920 | 985..1075 | 134 | 64.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2433..2549 | 984..1103 | 132 | 61.2 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7948..8006 | 994..1055 | 132 | 71 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 9392..9450 | 994..1055 | 132 | 71 | Plus |
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 627..684 | 1266..1323 | 127 | 72.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6792..6907 | 990..1104 | 126 | 59.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1523..1613 | 994..1081 | 124 | 63 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2392..2474 | 990..1073 | 120 | 61.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2767..2848 | 985..1065 | 119 | 62.2 | Plus |
TART-A | 13424 | TART-A 13424bp | 115..178 | 390..327 | 113 | 64.1 | Minus |
TART-A | 13424 | TART-A 13424bp | 11293..11356 | 390..327 | 113 | 64.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6808 | 1008..1093 | 112 | 62.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10098205..10099284 | 512..1594 | 97 | <- | Minus |
chrX | 10099587..10099903 | 195..511 | 99 | == | Minus |
chrX | 10103801..10103958 | 1..158 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15309-RB | 1..345 | 612..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15309-RB | 1..345 | 612..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15309-RC | 1..345 | 612..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15309-RB | 1..345 | 612..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15309-RC | 1..345 | 612..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15309-RA | 1..1594 | 1..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15309-RA | 1..1594 | 1..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15309-RA | 29..1622 | 1..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15309-RA | 1..1594 | 1..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15309-RA | 29..1622 | 1..1594 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10206593..10207675 | 512..1594 | 100 | <- | Minus |
X | 10207978..10208294 | 195..511 | 100 | <- | Minus |
X | 10212153..10212346 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10206593..10207675 | 512..1594 | 100 | <- | Minus |
X | 10207978..10208294 | 195..511 | 100 | <- | Minus |
X | 10212153..10212346 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10206593..10207675 | 512..1594 | 100 | <- | Minus |
X | 10207978..10208294 | 195..511 | 100 | <- | Minus |
X | 10212153..10212346 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10100626..10101708 | 512..1594 | 100 | <- | Minus |
arm_X | 10102011..10102327 | 195..511 | 100 | <- | Minus |
arm_X | 10106186..10106379 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10220251..10220444 | 1..194 | 100 | Minus | |
X | 10214691..10215773 | 512..1594 | 100 | <- | Minus |
X | 10216076..10216392 | 195..511 | 100 | <- | Minus |
Translation from 611 to 955
> GH10478.hyp MVKTFQAYLPSTNRTYSCVHCRAHLASHDELISKSFQGSQGPAYLFNSVV NVACGQTEERVLLTGLHAVADIYCECCKTPLGWKYEHAYESSQKYKEGKF IIELAHMIKENGWD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15309-PE | 114 | CG15309-PE | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PD | 114 | CG15309-PD | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PC | 114 | CG15309-PC | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PB | 114 | CG15309-PB | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PA | 114 | CG15309-PA | 1..114 | 1..114 | 623 | 100 | Plus |
Translation from 611 to 955
> GH10478.pep MVKTFQAYLPSTNRTYSCVHCRAHLASHDELISKSFQGSQGPAYLFNSVV NVACGQTEERVLLTGLHAVADIYCECCKTPLGWKYEHAYESSQKYKEGKF IIELAHMIKENGWD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19108-PA | 114 | GF19108-PA | 1..114 | 1..114 | 617 | 100 | Plus |
Dana\GF19499-PA | 121 | GF19499-PA | 13..112 | 14..113 | 248 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18944-PA | 114 | GG18944-PA | 1..114 | 1..114 | 617 | 100 | Plus |
Dere\GG19506-PA | 121 | GG19506-PA | 13..112 | 14..113 | 249 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24074-PA | 114 | GH24074-PA | 1..114 | 1..114 | 617 | 100 | Plus |
Dgri\GH24471-PA | 121 | GH24471-PA | 16..112 | 17..113 | 240 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15309-PE | 114 | CG15309-PE | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PD | 114 | CG15309-PD | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PC | 114 | CG15309-PC | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PB | 114 | CG15309-PB | 1..114 | 1..114 | 623 | 100 | Plus |
CG15309-PA | 114 | CG15309-PA | 1..114 | 1..114 | 623 | 100 | Plus |
Yippee-PA | 121 | CG1989-PA | 13..112 | 14..113 | 244 | 45 | Plus |
Yippee-PB | 110 | CG1989-PB | 13..94 | 14..95 | 204 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15523-PA | 114 | GI15523-PA | 1..114 | 1..114 | 617 | 100 | Plus |
Dmoj\GI15336-PA | 121 | GI15336-PA | 13..112 | 14..113 | 242 | 44 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22456-PA | 114 | GL22456-PA | 1..114 | 1..114 | 608 | 98.2 | Plus |
Dper\GL26724-PA | 121 | GL26724-PA | 13..112 | 14..113 | 245 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27919-PA | 114 | GA27919-PA | 1..114 | 1..114 | 617 | 100 | Plus |
Dpse\GA15174-PA | 121 | GA15174-PA | 13..112 | 14..113 | 245 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11334-PA | 114 | GM11334-PA | 1..114 | 1..114 | 617 | 100 | Plus |
Dsec\GM11494-PA | 121 | GM11494-PA | 13..112 | 14..113 | 249 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24655-PA | 114 | GD24655-PA | 1..114 | 1..114 | 617 | 100 | Plus |
Dsim\GD15888-PA | 121 | GD15888-PA | 13..112 | 14..113 | 249 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19280-PA | 114 | GJ19280-PA | 1..114 | 1..114 | 617 | 100 | Plus |
Dvir\GJ14773-PA | 121 | GJ14773-PA | 13..112 | 14..113 | 242 | 44 | Plus |