BDGP Sequence Production Resources |
Search the DGRC for GH10582
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 105 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | pinta-RA |
Protein status: | GH10582.pep: gold |
Preliminary Size: | 1205 |
Sequenced Size: | 1129 |
Gene | Date | Evidence |
---|---|---|
CG13848 | 2001-01-01 | Release 2 assignment |
CG13848 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13848 | 2003-03-12 | Blastp of sequenced clone |
pinta | 2008-04-29 | Release 5.5 accounting |
pinta | 2008-08-15 | Release 5.9 accounting |
pinta | 2008-12-18 | 5.12 accounting |
1129 bp (1129 high quality bases) assembled on 2003-03-12
GenBank Submission: BT005203
> GH10582.complete CCATGTGGTCGCGCAGCAGCAGTTCCAAAAGACAAGTGGCCACCACCGAT GGTGACCCCGAAAGGGTTTTGGCGCAGGTCCAGGATCTCAGCGACTGGCT CGTCGCCAATCCGCAGATCAACGGATGCAACACCTTCGAGAACCTGCACT TCTTCCTCCGCACCTCCAAGTTCGATGTGGAACGGGCCAAAAAGAAACTG AAAACGTTCTACCAAATGCGGGCGGAGCGCACCGAATGGTTCGATAATCG CGATCCCCAATTGCCCGAGATCCAGGACCTACTCAAGCTGGGCGTCTTCC TACCCATCGGTCCGGATGCCGAACAAAGGATGGTGGTGGTCATACGCACA GCAGCACACGATCCCAAGCTCCACAGCCAGAACAATGTTTTTAAAACCAG CAAAATGATATTGGACCTGCTGCTAAAGCTCGATCCGGAGACCTGTGCCC GCGGAATGGTGGCTATTCTGGATATGCAGGGCGTTCAACTGGGGCACGCT CTTCAAATGAATCCGAAGCTCATCAAGAGATCCGTGGAAAGCTGGACCGC ATATCCATGTCAGCCCAAGCTATTGGAATTCACCAACGCCCCGCGCCATG TGAACTTCTTTTTGAACACCTTTAGAATATTCATGACGCCCAAGATAAGA TCGCGACTTTTCGTGCGTCGTGAAGGAACATCCGTGAGCTGCGATCAGTT GCCAAAGGAACTCGGTGGTCAGGGATTAAGCTATATGGAGCTGTCTGTGA AGTGGAAGCAGTTGGTCGAGGAGAACGCCGATTTCTATGTGGAACAAGAC AAATACAAAAGCAAGCTCAAGTGATTGGGGTTAGTGTGGCGGCAGTGATA ACAAGGCGATTAGCCGAATGTTATAGATTAGTCGAAAACATTTACAATGC GCAAATGCACAAAGGCGCATATCAGTTGTCATATTTTATGGAAGGGTACT ACAAATACTCCCTAATTCCCCACTTAACCATATTTGTATATATTATAAGT CATTACGTTAAACCTTTTTAAAAAAGGTTATTTTCGTTGTGTTAATCATC AATGTTATCTTTTTTTTTTTGCTTAATAAAGTGTCAATACACGATAAACC AAACAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pinta-RA | 1298 | pinta-RA | 184..1293 | 1..1110 | 5550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18246868..18247351 | 1104..621 | 2420 | 100 | Minus |
chr3R | 27901430 | chr3R | 18247850..18248244 | 395..1 | 1960 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 18247404..18247633 | 625..396 | 1150 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22423310..22423799 | 1110..621 | 2450 | 100 | Minus |
3R | 32079331 | 3R | 22424298..22424692 | 395..1 | 1975 | 100 | Minus |
3R | 32079331 | 3R | 22423852..22424081 | 625..396 | 1150 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22164141..22164630 | 1110..621 | 2450 | 100 | Minus |
3R | 31820162 | 3R | 22165129..22165523 | 395..1 | 1975 | 100 | Minus |
3R | 31820162 | 3R | 22164683..22164912 | 625..396 | 1150 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 485..532 | 1098..1051 | 141 | 77.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18246868..18247346 | 626..1104 | 100 | <- | Minus |
chr3R | 18247404..18247633 | 396..625 | 100 | <- | Minus |
chr3R | 18247850..18248244 | 1..395 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pinta-RA | 1..822 | 3..824 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pinta-RA | 1..822 | 3..824 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pinta-RA | 1..822 | 3..824 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pinta-RA | 1..822 | 3..824 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pinta-RA | 1..822 | 3..824 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pinta-RA | 34..1137 | 1..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pinta-RA | 34..1137 | 1..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pinta-RA | 34..1137 | 1..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pinta-RA | 34..1137 | 1..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pinta-RA | 34..1137 | 1..1104 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22423316..22423794 | 626..1104 | 100 | <- | Minus |
3R | 22423852..22424081 | 396..625 | 100 | <- | Minus |
3R | 22424298..22424692 | 1..395 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22423316..22423794 | 626..1104 | 100 | <- | Minus |
3R | 22423852..22424081 | 396..625 | 100 | <- | Minus |
3R | 22424298..22424692 | 1..395 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22423316..22423794 | 626..1104 | 100 | <- | Minus |
3R | 22423852..22424081 | 396..625 | 100 | <- | Minus |
3R | 22424298..22424692 | 1..395 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18249574..18249803 | 396..625 | 100 | <- | Minus |
arm_3R | 18249038..18249516 | 626..1104 | 100 | <- | Minus |
arm_3R | 18250020..18250414 | 1..395 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22164147..22164625 | 626..1104 | 100 | <- | Minus |
3R | 22164683..22164912 | 396..625 | 100 | <- | Minus |
3R | 22165129..22165523 | 1..395 | 100 | Minus |
Translation from 2 to 823
> GH10582.pep MWSRSSSSKRQVATTDGDPERVLAQVQDLSDWLVANPQINGCNTFENLHF FLRTSKFDVERAKKKLKTFYQMRAERTEWFDNRDPQLPEIQDLLKLGVFL PIGPDAEQRMVVVIRTAAHDPKLHSQNNVFKTSKMILDLLLKLDPETCAR GMVAILDMQGVQLGHALQMNPKLIKRSVESWTAYPCQPKLLEFTNAPRHV NFFLNTFRIFMTPKIRSRLFVRREGTSVSCDQLPKELGGQGLSYMELSVK WKQLVEENADFYVEQDKYKSKLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16567-PA | 273 | GF16567-PA | 1..273 | 1..273 | 1298 | 89.7 | Plus |
Dana\GF15442-PA | 313 | GF15442-PA | 23..285 | 19..273 | 306 | 27.4 | Plus |
Dana\GF24441-PA | 310 | GF24441-PA | 23..282 | 19..270 | 274 | 26.9 | Plus |
Dana\GF12489-PA | 311 | GF12489-PA | 26..286 | 19..273 | 264 | 28.1 | Plus |
Dana\GF25066-PA | 311 | GF25066-PA | 14..283 | 9..270 | 262 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12518-PA | 273 | GG12518-PA | 1..273 | 1..273 | 1428 | 97.1 | Plus |
Dere\GG23602-PA | 313 | GG23602-PA | 23..285 | 19..273 | 309 | 28.1 | Plus |
Dere\GG14766-PA | 324 | GG14766-PA | 37..296 | 19..270 | 280 | 27.3 | Plus |
Dere\GG25270-PA | 313 | GG25270-PA | 28..288 | 19..273 | 274 | 28.7 | Plus |
Dere\GG15223-PA | 311 | GG15223-PA | 23..283 | 18..270 | 248 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17504-PA | 284 | GH17504-PA | 34..283 | 25..273 | 1064 | 78.4 | Plus |
Dgri\GH13581-PA | 314 | GH13581-PA | 25..287 | 19..273 | 299 | 28.4 | Plus |
Dgri\GH15439-PA | 324 | GH15439-PA | 22..296 | 4..270 | 277 | 24.7 | Plus |
Dgri\GH15199-PA | 308 | GH15199-PA | 24..283 | 19..273 | 276 | 28.2 | Plus |
Dgri\GH22856-PA | 316 | GH22856-PA | 31..291 | 19..273 | 266 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pinta-PB | 273 | CG13848-PB | 1..273 | 1..273 | 1428 | 100 | Plus |
pinta-PA | 273 | CG13848-PA | 1..273 | 1..273 | 1428 | 100 | Plus |
CG31636-PB | 313 | CG31636-PB | 23..280 | 19..268 | 290 | 28.3 | Plus |
CG31636-PA | 313 | CG31636-PA | 23..280 | 19..268 | 290 | 28.3 | Plus |
CG33966-PA | 310 | CG33966-PA | 23..280 | 19..268 | 281 | 26.7 | Plus |
CG12926-PA | 313 | CG12926-PA | 28..288 | 19..273 | 259 | 27.8 | Plus |
CG33514-PA | 311 | CG33514-PA | 23..277 | 18..264 | 239 | 25.5 | Plus |
CG2663-PC | 308 | CG2663-PC | 23..280 | 18..270 | 230 | 29.2 | Plus |
CG2663-PA | 308 | CG2663-PA | 23..280 | 18..270 | 230 | 29.2 | Plus |
CG33965-PA | 317 | CG33965-PA | 28..256 | 19..239 | 225 | 28.4 | Plus |
CG30339-PA | 308 | CG30339-PA | 8..278 | 6..268 | 193 | 25.4 | Plus |
CG3823-PA | 295 | CG3823-PA | 9..273 | 18..273 | 186 | 22.9 | Plus |
CG1902-PC | 312 | CG1902-PC | 22..276 | 18..268 | 180 | 23.1 | Plus |
CG1902-PA | 312 | CG1902-PA | 22..276 | 18..268 | 180 | 23.1 | Plus |
Cralbp-PA | 324 | CG10546-PA | 34..280 | 26..267 | 176 | 25.6 | Plus |
CG10657-PA | 334 | CG10657-PA | 39..290 | 8..257 | 170 | 23.7 | Plus |
CG3091-PC | 303 | CG3091-PC | 25..289 | 25..268 | 154 | 23.7 | Plus |
CG3091-PA | 303 | CG3091-PA | 25..289 | 25..268 | 154 | 23.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10372-PA | 283 | GI10372-PA | 33..282 | 25..273 | 1092 | 80 | Plus |
Dmoj\GI24205-PA | 314 | GI24205-PA | 25..282 | 19..268 | 286 | 27.4 | Plus |
Dmoj\GI16717-PA | 308 | GI16717-PA | 23..283 | 18..273 | 281 | 30.3 | Plus |
Dmoj\GI13038-PA | 318 | GI13038-PA | 29..257 | 19..239 | 275 | 28.8 | Plus |
Dmoj\GI21233-PA | 313 | GI21233-PA | 29..288 | 20..273 | 260 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23338-PA | 2398 | GL23338-PA | 2271..2398 | 132..259 | 616 | 86.7 | Plus |
Dper\GL26205-PA | 313 | GL26205-PA | 23..251 | 19..239 | 290 | 30.6 | Plus |
Dper\GL17330-PA | 311 | GL17330-PA | 26..286 | 19..273 | 277 | 28 | Plus |
Dper\GL16163-PA | 311 | GL16163-PA | 14..283 | 9..270 | 268 | 24.8 | Plus |
Dper\GL16161-PA | 313 | GL16161-PA | 23..260 | 19..248 | 248 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12568-PA | 274 | GA12568-PA | 1..274 | 1..273 | 1271 | 85 | Plus |
Dpse\GA16352-PA | 313 | GA16352-PA | 23..251 | 19..239 | 290 | 30.6 | Plus |
Dpse\GA11913-PA | 311 | GA11913-PA | 26..286 | 19..273 | 278 | 28.4 | Plus |
Dpse\GA28411-PA | 311 | GA28411-PA | 14..283 | 9..270 | 268 | 24.8 | Plus |
Dpse\GA28527-PA | 311 | GA28527-PA | 24..283 | 19..270 | 255 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23653-PA | 273 | GM23653-PA | 1..273 | 1..273 | 1447 | 98.2 | Plus |
Dsec\GM14034-PA | 313 | GM14034-PA | 23..285 | 19..273 | 308 | 28.6 | Plus |
Dsec\GM20588-PA | 313 | GM20588-PA | 28..288 | 19..273 | 260 | 28.5 | Plus |
Dsec\GM14655-PA | 311 | GM14655-PA | 23..283 | 18..270 | 237 | 26.3 | Plus |
Dsec\GM14385-PA | 317 | GM14385-PA | 28..256 | 19..239 | 232 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18460-PA | 273 | GD18460-PA | 1..273 | 1..273 | 1453 | 98.9 | Plus |
Dsim\GD22558-PA | 313 | GD22558-PA | 23..285 | 19..273 | 308 | 28.6 | Plus |
Dsim\GD13840-PA | 311 | GD13840-PA | 23..283 | 18..270 | 236 | 26 | Plus |
Dsim\GD19620-PA | 308 | GD19620-PA | 23..280 | 18..270 | 231 | 29.2 | Plus |
Dsim\GD10061-PA | 308 | GD10061-PA | 8..278 | 6..268 | 193 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22834-PA | 283 | GJ22834-PA | 33..282 | 25..273 | 1093 | 80 | Plus |
Dvir\GJ12135-PA | 310 | GJ12135-PA | 23..282 | 19..270 | 288 | 27.7 | Plus |
Dvir\GJ21474-PA | 314 | GJ21474-PA | 25..253 | 19..239 | 282 | 31 | Plus |
Dvir\GJ12134-PA | 318 | GJ12134-PA | 29..257 | 19..239 | 257 | 28.8 | Plus |
Dvir\GJ12461-PA | 308 | GJ12461-PA | 23..283 | 18..273 | 256 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14187-PA | 273 | GK14187-PA | 1..273 | 1..273 | 1243 | 81.7 | Plus |
Dwil\GK18277-PA | 317 | GK18277-PA | 27..289 | 19..273 | 281 | 26.2 | Plus |
Dwil\GK11682-PA | 311 | GK11682-PA | 24..283 | 19..270 | 279 | 28.1 | Plus |
Dwil\GK21135-PA | 310 | GK21135-PA | 23..282 | 19..270 | 266 | 25.4 | Plus |
Dwil\GK15622-PA | 313 | GK15622-PA | 28..288 | 19..273 | 264 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24040-PA | 273 | GE24040-PA | 1..273 | 1..273 | 1448 | 98.5 | Plus |
Dyak\GE18422-PA | 313 | GE18422-PA | 23..285 | 19..273 | 298 | 27.4 | Plus |
Dyak\GE22148-PA | 313 | GE22148-PA | 28..288 | 19..273 | 273 | 28.3 | Plus |
Dyak\GE21129-PA | 310 | GE21129-PA | 23..282 | 19..270 | 269 | 26.5 | Plus |
Dyak\GE21443-PA | 311 | GE21443-PA | 23..283 | 18..270 | 258 | 27.1 | Plus |
Translation from 2 to 823
> GH10582.hyp MWSRSSSSKRQVATTDGDPERVLAQVQDLSDWLVANPQINGCNTFENLHF FLRTSKFDVERAKKKLKTFYQMRAERTEWFDNRDPQLPEIQDLLKLGVFL PIGPDAEQRMVVVIRTAAHDPKLHSQNNVFKTSKMILDLLLKLDPETCAR GMVAILDMQGVQLGHALQMNPKLIKRSVESWTAYPCQPKLLEFTNAPRHV NFFLNTFRIFMTPKIRSRLFVRREGTSVSCDQLPKELGGQGLSYMELSVK WKQLVEENADFYVEQDKYKSKLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pinta-PB | 273 | CG13848-PB | 1..273 | 1..273 | 1428 | 100 | Plus |
pinta-PA | 273 | CG13848-PA | 1..273 | 1..273 | 1428 | 100 | Plus |
CG31636-PB | 313 | CG31636-PB | 23..280 | 19..268 | 290 | 28.3 | Plus |
CG31636-PA | 313 | CG31636-PA | 23..280 | 19..268 | 290 | 28.3 | Plus |
CG33966-PA | 310 | CG33966-PA | 23..280 | 19..268 | 281 | 26.7 | Plus |