BDGP Sequence Production Resources |
Search the DGRC for GH10609
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 106 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | yellow-d-RA |
Protein status: | GH10609.pep: gold |
Sequenced Size: | 1857 |
Gene | Date | Evidence |
---|---|---|
CG9889 | 2002-12-10 | Blastp of sequenced clone |
CG9889 | 2003-01-01 | Sim4 clustering to Release 3 |
yellow-d | 2008-04-29 | Release 5.5 accounting |
yellow-d | 2008-08-15 | Release 5.9 accounting |
yellow-d | 2008-12-18 | 5.12 accounting |
1857 bp (1857 high quality bases) assembled on 2002-12-10
GenBank Submission: BT003303
> GH10609.complete CCTGCTCGTCTTCAAGCCACCAAGCTAAAAAGCCTGTTTTCAGTTGATAG TTGGCTACCGAAGTGAGACGTCGAAGAAAGTGTCGTTAGATCGGGGTCAC CGTATTAAATTATTCCGCATTGTTAGGCCGCATCTGGCCAAATATCAACA GACCCTTGCTCTTAATTGGTCGTCAACAAGTAGACAAAGCCAGGCCGCGG TCCACACTCTTCGATCTCCGCCAGCCAGCCTGCCTGCCTCTCTGCCACTT ATCAACGCCTCAGGAACCAACTTGCTTGATAAGCAGCTGCCCTTAGTTCG AACAGAACATTTACCATCCGACTCTGCTGCGGAATGGTTATGATGCCCCT CCGGATACTGCTGATCGCCTTTTCGCTGACGCTAGCCCAGAGCTATGGCG TCGGTGTCAATGGACCGCGTCCCGTGCGCACTGTAGAAACGCTGACGCAG TGGGGCCAGCTGGAGTTCGGATTTCCCACGGCGCAGGATCGGGAGAACGC TCAGGCGGCGGGTAATCTGGTGCCCGAGAACGGCACTCCCATCGATGTGC AGCCACAGTACATGGCCAATGGCCAGATCAGGCTGTTCACCACTATTCCG CGCTTCGTGACGGGCATTCCCTACACCTTGGCCACCGTTTCAGCGACGCA GGGCAGGAATGGCCCGCTGCTGCAGCCGTATCCCAACTACTCCTGGCACA ATGCCAACGGCGAGGACTGCGATCGCATAACATCCGCATTCAGAGTGGCT ATCACCGAGTGCAACCAGATGTGGGTGATCGATTCGGGTGTGATTGGAAC CACCCAGCTGTGTCCGCCGCAGTTGCTGCAGTTCGCCCTGGCCACCGATC GCTTGCTGCATCGCTTCCGCTTCCCGAACGACACATACATCCCGAGTGGA TCGCTCTTCATCACGCCAAATGTACTCGTCCAGGATCCTCCGCCTAGGGG AACCTGCAGTCGCACCATGATCTATGTGGCCGATGTGAGCTATCATGGCT TGGTGGTCTACGACCACCAGGCGCAGACATCATGGCGGGCTGAGAACCGC TTTATGTATCCCGATCCGGACTACGGCAAGCACACCATAGCAGGCGAGAG CTTCTACCTGATGGACGGCATGTTTGCACTGAACAACGACAAGCGCAATC TTTACTTCCATCCGCTGGCCAGTGCAAGTGAGTATTCCGTGCCACTGAGT GCTTTGAACCGGCAGCAGAACTGGGCCAACGGGCCGGAGGCTCTGCCGGA GGAGTTCAGGCTGCTAGGCAGGCGGCGGAGCGAGTGCGCCGCGTCCGCCA TCGATGGCAGGAACAACGTCTACTGCGTCACCTTCAATCCCGTCAAGCTC TTTGTGTGGAACGTGAACTCGCCGTACAATTCGCGAAACTTTGGCAATCT GCCAGCCAAGTCCGATGACCTGCAGTTCGTCAGCGGCATGAAGGTGTTGC GGAACCGCGAAGGGCAGGAGGAACTCTGGATGCTCTCCAATCGCTACCAG AAAATCGCCGCAGGTACGCTGAACTCGAAGGAGGTCAACTTCCGCATCCT GCGCCGCAAGTTGGATGATGTCCAGGGCGGCGTCTTCTTCTCCAACGACG AGGATCTAACCAATCGCCTGGTGTTTAGCTAGTGACTTAGCAAATCCACT TAATTAATATATGTAAATATTAGTTTTGTTGTGCACTTCACTGGGGGATC GTTGCGAATTCCGCCTAAGTGCTAATAACAGCCTATCTGAAATTGTAAAG ATTCCGCAAATCCTAAGAAATATATATGACGTGTAAATATTAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yellow-d-RA | 2047 | yellow-d-RA | 190..1982 | 1..1793 | 8950 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19265655..19266404 | 751..1500 | 3660 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 19264851..19265600 | 1..750 | 3645 | 99.1 | Plus |
chr2R | 21145070 | chr2R | 19266464..19266756 | 1499..1791 | 1420 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23378533..23379282 | 1..750 | 3750 | 100 | Plus |
2R | 25286936 | 2R | 23379337..23380086 | 751..1500 | 3750 | 100 | Plus |
2R | 25286936 | 2R | 23380146..23380440 | 1499..1793 | 1460 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23380536..23381285 | 751..1500 | 3750 | 100 | Plus |
2R | 25260384 | 2R | 23379732..23380481 | 1..750 | 3750 | 100 | Plus |
2R | 25260384 | 2R | 23381345..23381639 | 1499..1793 | 1460 | 99.6 | Plus |
2R | 25260384 | 2R | 23383166..23383253 | 1033..1120 | 155 | 78.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19264851..19265600 | 1..750 | 99 | -> | Plus |
chr2R | 19265655..19266404 | 751..1500 | 99 | -> | Plus |
chr2R | 19266466..19266756 | 1501..1791 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-d-RA | 1..1299 | 334..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-d-RA | 1..1299 | 334..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-d-RA | 1..1299 | 334..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-d-RA | 1..1299 | 334..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-d-RA | 1..1299 | 334..1632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-d-RA | 1..1791 | 1..1791 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-d-RA | 1..1791 | 1..1791 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-d-RA | 1..1751 | 41..1791 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-d-RA | 1..1791 | 1..1791 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-d-RA | 1..1751 | 41..1791 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23378533..23379282 | 1..750 | 100 | -> | Plus |
2R | 23379337..23380086 | 751..1500 | 100 | -> | Plus |
2R | 23380148..23380438 | 1501..1791 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23378533..23379282 | 1..750 | 100 | -> | Plus |
2R | 23379337..23380086 | 751..1500 | 100 | -> | Plus |
2R | 23380148..23380438 | 1501..1791 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23378533..23379282 | 1..750 | 100 | -> | Plus |
2R | 23379337..23380086 | 751..1500 | 100 | -> | Plus |
2R | 23380148..23380438 | 1501..1791 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19267671..19267961 | 1501..1791 | 99 | Plus | |
arm_2R | 19266056..19266805 | 1..750 | 100 | -> | Plus |
arm_2R | 19266860..19267609 | 751..1500 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23379750..23380499 | 1..750 | 100 | -> | Plus |
2R | 23380554..23381303 | 751..1500 | 100 | -> | Plus |
2R | 23381365..23381655 | 1501..1791 | 99 | Plus |
Translation from 333 to 1631
> GH10609.pep MVMMPLRILLIAFSLTLAQSYGVGVNGPRPVRTVETLTQWGQLEFGFPTA QDRENAQAAGNLVPENGTPIDVQPQYMANGQIRLFTTIPRFVTGIPYTLA TVSATQGRNGPLLQPYPNYSWHNANGEDCDRITSAFRVAITECNQMWVID SGVIGTTQLCPPQLLQFALATDRLLHRFRFPNDTYIPSGSLFITPNVLVQ DPPPRGTCSRTMIYVADVSYHGLVVYDHQAQTSWRAENRFMYPDPDYGKH TIAGESFYLMDGMFALNNDKRNLYFHPLASASEYSVPLSALNRQQNWANG PEALPEEFRLLGRRRSECAASAIDGRNNVYCVTFNPVKLFVWNVNSPYNS RNFGNLPAKSDDLQFVSGMKVLRNREGQEELWMLSNRYQKIAAGTLNSKE VNFRILRRKLDDVQGGVFFSNDEDLTNRLVFS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11856-PA | 428 | GF11856-PA | 1..428 | 3..432 | 1988 | 84.4 | Plus |
Dana\GF19909-PA | 404 | GF19909-PA | 7..400 | 31..416 | 896 | 42.1 | Plus |
Dana\GF11858-PA | 411 | GF11858-PA | 1..407 | 4..416 | 828 | 41.8 | Plus |
Dana\GF17381-PA | 418 | GF17381-PA | 1..402 | 3..413 | 586 | 34 | Plus |
Dana\GF15359-PA | 453 | GF15359-PA | 27..395 | 39..412 | 413 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22849-PA | 429 | GG22849-PA | 1..428 | 3..432 | 2142 | 93 | Plus |
Dere\GG17051-PA | 440 | GG17051-PA | 40..440 | 28..419 | 853 | 41.6 | Plus |
Dere\GG22850-PA | 412 | GG22850-PA | 31..408 | 43..416 | 801 | 41.9 | Plus |
Dere\GG17052-PA | 409 | GG17052-PA | 1..391 | 8..413 | 555 | 35.2 | Plus |
Dere\GG16380-PA | 459 | GG16380-PA | 49..432 | 34..415 | 511 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21215-PA | 446 | GH21215-PA | 13..446 | 6..432 | 1720 | 71.7 | Plus |
Dgri\GH21214-PA | 428 | GH21214-PA | 40..422 | 30..414 | 1582 | 73 | Plus |
Dgri\GH21216-PA | 431 | GH21216-PA | 8..428 | 6..417 | 800 | 39.5 | Plus |
Dgri\GH18543-PA | 416 | GH18543-PA | 7..401 | 8..413 | 551 | 30.8 | Plus |
Dgri\GH23996-PA | 455 | GH23996-PA | 45..426 | 33..413 | 497 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yellow-d-PA | 432 | CG9889-PA | 1..432 | 1..432 | 2298 | 100 | Plus |
yellow-e2-PB | 435 | CG17044-PB | 1..431 | 1..416 | 871 | 40.3 | Plus |
yellow-d2-PA | 412 | CG9891-PA | 31..408 | 43..416 | 769 | 41.4 | Plus |
yellow-e3-PA | 409 | CG17045-PA | 19..391 | 31..413 | 555 | 35.8 | Plus |
yellow-h-PA | 463 | CG1629-PA | 53..434 | 34..413 | 485 | 29.4 | Plus |
yellow-b-PB | 453 | CG17914-PB | 27..389 | 39..406 | 406 | 31.4 | Plus |
yellow-b-PA | 453 | CG17914-PA | 27..389 | 39..406 | 406 | 31.4 | Plus |
yellow-c-PB | 438 | CG4182-PB | 27..433 | 34..416 | 389 | 27.4 | Plus |
yellow-c-PA | 438 | CG4182-PA | 27..433 | 34..416 | 389 | 27.4 | Plus |
y-PA | 541 | CG3757-PA | 31..391 | 40..405 | 382 | 29 | Plus |
yellow-e-PA | 530 | CG9792-PA | 66..390 | 83..410 | 375 | 28.2 | Plus |
yellow-f2-PA | 452 | CG8063-PA | 112..441 | 83..409 | 339 | 28.1 | Plus |
yellow-f-PB | 418 | CG18550-PB | 31..406 | 39..408 | 314 | 25.9 | Plus |
yellow-f-PC | 413 | CG18550-PC | 64..401 | 74..408 | 308 | 26.8 | Plus |
yellow-f-PA | 429 | CG18550-PA | 80..417 | 74..408 | 308 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20501-PA | 443 | GI20501-PA | 8..443 | 1..432 | 1690 | 68.1 | Plus |
Dmoj\GI20502-PA | 429 | GI20502-PA | 7..426 | 6..417 | 795 | 39.4 | Plus |
Dmoj\GI23242-PA | 408 | GI23242-PA | 27..395 | 31..413 | 559 | 32.3 | Plus |
Dmoj\GI11002-PA | 470 | GI11002-PA | 58..440 | 36..413 | 466 | 29.4 | Plus |
Dmoj\GI13248-PA | 432 | GI13248-PA | 1..427 | 3..416 | 419 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17570-PA | 434 | GL17570-PA | 25..433 | 24..432 | 1825 | 80.2 | Plus |
Dper\GL23986-PA | 429 | GL23986-PA | 38..423 | 39..416 | 886 | 43 | Plus |
Dper\GL17571-PA | 418 | GL17571-PA | 26..414 | 32..416 | 771 | 38.9 | Plus |
Dper\GL23987-PA | 409 | GL23987-PA | 44..389 | 69..413 | 546 | 34.7 | Plus |
Dper\GL18156-PA | 466 | GL18156-PA | 55..431 | 34..407 | 465 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22103-PA | 434 | GA22103-PA | 25..433 | 24..432 | 1825 | 80.2 | Plus |
Dpse\GA14291-PB | 426 | GA14291-PB | 3..420 | 14..416 | 892 | 41.6 | Plus |
Dpse\GA22105-PA | 422 | GA22105-PA | 30..418 | 32..416 | 765 | 38.4 | Plus |
Dpse\GA14292-PA | 409 | GA14292-PA | 44..389 | 69..413 | 546 | 34.7 | Plus |
Dpse\GA27858-PA | 427 | GA27858-PA | 16..392 | 34..407 | 469 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16007-PA | 430 | GM16007-PA | 1..430 | 3..432 | 2234 | 96.5 | Plus |
Dsec\GM25936-PA | 426 | GM25936-PA | 26..422 | 28..416 | 873 | 41.8 | Plus |
Dsec\GM16008-PA | 412 | GM16008-PA | 31..408 | 43..416 | 763 | 39.5 | Plus |
Dsec\GM25937-PA | 409 | GM25937-PA | 2..391 | 6..413 | 565 | 35.1 | Plus |
Dsec\GM17203-PA | 453 | GM17203-PA | 27..389 | 39..406 | 415 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11758-PA | 432 | GD11758-PA | 1..432 | 1..432 | 2250 | 96.8 | Plus |
Dsim\GD20498-PA | 426 | GD20498-PA | 26..422 | 28..416 | 880 | 42.1 | Plus |
Dsim\GD11759-PA | 412 | GD11759-PA | 31..408 | 43..416 | 786 | 41.1 | Plus |
Dsim\GD20499-PA | 387 | GD20499-PA | 2..368 | 6..364 | 471 | 33.8 | Plus |
Dsim\GD24079-PA | 453 | GD24079-PA | 27..389 | 39..406 | 409 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22351-PA | 453 | GJ22351-PA | 50..453 | 29..432 | 1709 | 73.5 | Plus |
Dvir\GJ22352-PA | 430 | GJ22352-PA | 36..427 | 32..417 | 804 | 40.7 | Plus |
Dvir\GJ10739-PA | 415 | GJ10739-PA | 1..399 | 3..413 | 602 | 34.4 | Plus |
Dvir\GJ14923-PA | 455 | GJ14923-PA | 36..426 | 26..413 | 498 | 30.8 | Plus |
Dvir\GJ11869-PA | 435 | GJ11869-PA | 24..431 | 34..417 | 427 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23284-PA | 446 | GK23284-PA | 43..446 | 29..432 | 1813 | 79.7 | Plus |
Dwil\GK13343-PA | 420 | GK13343-PA | 15..412 | 27..416 | 885 | 42 | Plus |
Dwil\GK23285-PA | 422 | GK23285-PA | 5..418 | 6..416 | 783 | 38.5 | Plus |
Dwil\GK13344-PA | 401 | GK13344-PA | 40..381 | 66..413 | 535 | 33.5 | Plus |
Dwil\GK13672-PA | 468 | GK13672-PA | 52..440 | 29..417 | 487 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14284-PA | 430 | GE14284-PA | 1..430 | 3..432 | 2195 | 94.4 | Plus |
Dyak\GE24439-PA | 440 | GE24439-PA | 19..436 | 14..416 | 865 | 41.3 | Plus |
Dyak\GE14285-PA | 412 | GE14285-PA | 31..408 | 43..416 | 797 | 41.4 | Plus |
Dyak\GE24440-PA | 411 | GE24440-PA | 19..393 | 31..413 | 551 | 34.7 | Plus |
Dyak\GE14541-PA | 463 | GE14541-PA | 54..449 | 35..428 | 489 | 29.7 | Plus |
Translation from 333 to 1631
> GH10609.hyp MVMMPLRILLIAFSLTLAQSYGVGVNGPRPVRTVETLTQWGQLEFGFPTA QDRENAQAAGNLVPENGTPIDVQPQYMANGQIRLFTTIPRFVTGIPYTLA TVSATQGRNGPLLQPYPNYSWHNANGEDCDRITSAFRVAITECNQMWVID SGVIGTTQLCPPQLLQFALATDRLLHRFRFPNDTYIPSGSLFITPNVLVQ DPPPRGTCSRTMIYVADVSYHGLVVYDHQAQTSWRAENRFMYPDPDYGKH TIAGESFYLMDGMFALNNDKRNLYFHPLASASEYSVPLSALNRQQNWANG PEALPEEFRLLGRRRSECAASAIDGRNNVYCVTFNPVKLFVWNVNSPYNS RNFGNLPAKSDDLQFVSGMKVLRNREGQEELWMLSNRYQKIAAGTLNSKE VNFRILRRKLDDVQGGVFFSNDEDLTNRLVFS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yellow-d-PA | 432 | CG9889-PA | 1..432 | 1..432 | 2298 | 100 | Plus |
yellow-e2-PB | 435 | CG17044-PB | 1..431 | 1..416 | 871 | 40.3 | Plus |
yellow-d2-PA | 412 | CG9891-PA | 31..408 | 43..416 | 769 | 41.4 | Plus |
yellow-e3-PA | 409 | CG17045-PA | 19..391 | 31..413 | 555 | 35.8 | Plus |
yellow-h-PA | 463 | CG1629-PA | 53..434 | 34..413 | 485 | 29.4 | Plus |