Clone GH10703 Report

Search the DGRC for GH10703

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:107
Well:3
Vector:pOT2
Associated Gene/TranscriptCG7146-RA
Protein status:GH10703.pep: gold
Preliminary Size:2827
Sequenced Size:2898

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7146 2001-01-01 Release 2 assignment
CG7146 2001-10-10 Blastp of sequenced clone
CG7146 2003-01-01 Sim4 clustering to Release 3
CG7146 2008-04-29 Release 5.5 accounting
CG7146 2008-08-15 Release 5.9 accounting
CG7146 2008-12-18 5.12 accounting

Clone Sequence Records

GH10703.complete Sequence

2898 bp (2898 high quality bases) assembled on 2001-10-10

GenBank Submission: AY060674

> GH10703.complete
CTTTTTTACGAAAATAAATTGAGGCGGAGGAGACCGAAGTTTTTCCACTT
GGCCAAGATGCACCAGGCCTACAGTGTTCACTCGATCCTGAAACAGGGCG
TGCAGATAGAGTCAATTGCGGCATATGGCAACCATGTCATCTTGGGCACC
CGCAGCGGACAGCTGATCATGTACTCTGTGGACGAGGAGACGGGCGTGGA
CATGCGGATGTTCAACAAGAACTTCAGCCGGAAACCGATCACCCAAATGG
AAGTGATTGCCTCGGAGAACCTGCTCTTCGTACTCACCGACTTACAGGTG
CAGGTGTGCGACATTCGGCGGATTGAGAGCAACTTCGCTTTCATGCACAG
TGCGCCCGACACGAAGGGATGCACCCTGTTCACCATGGACGTGGACACGC
CGAAGTCCACAACCGGACGTGTGGCCACCGTCATACGGGTGTGCTGCGCT
ATCCGGCGGCGTCTTGTGTTCTTCTTTTGGAAGGAGGACAAGCTTAATTC
CCTGGAATTGATCATCGAGCTCAGCGATGTGCCCAGGACACTGTGCTGGG
TGGGCCATGCTGTCTGCGTGGGCTTCAAAGACGAATATGTTGTTTACGAT
ATATCAGGAAAAGCACCAAAGAAGCACAACCTCTTCCTTACCTCCTCTAG
TATCAGCAGAGATCCCTGCATTTGCCTTATCCGGAACAACATGTTGGGCA
TCTCTAAGGACAGCTACCTCGTCGTAGTAGATCCGAGTCAGTACAAAGAA
TCGGATGGAATCAATAACTCAACAGATGTCCGGCCAGCTGCCATGGACAG
CAATAGTTCCCTAACTCCTCTGCTCTGGTCAAGTCCGCTTTTAGATCTGG
TCTGGGATGAGCCATTCGCTGTGGGTCGTGTCAACAACGCCATCGAGGTG
CGCAGCCTAGTGGGCAAGGACACCCTGGTCCAGACCATTCCCGAGCTACA
GAAGACGAAATTCCTGGTTCACGCCGACAAGGGAACCATCTTTGCCGCCG
CCACCTCCGAGCTTTGGTGCATTCGAATGGTGGAAATCCCTATCCAGCGT
CAGCAGTTGCTACAGCAAAAGAAATTCCAACTGGCTATTGAGCTGACGCA
AATCTCCGATGAACCTGCCGCGGACCGAGCCCAAACCATTCGCCAGATAC
ACATGCTCTATGCGAAAGAGCTGTTTACCAATAAGGAGTTCTCGGCGGCC
ATGAAGGAGTTTGAAAAGGCGGCTATAGATCCCTACGATGTGATAAGACT
GTTCCCAAACTTGGTGCCAGAACCAAAGCCCGGCACCGAAGATGTCACCG
TGCCTACGTCCAGTACTCCGGCGCTTGAGGATAGCGACCTGGAGAACGCC
TACTTGGCACTGATCGAGTATCTGGCATGGGCCCGACAGCGGGAGGTGGT
CAAGCTGCGCGACACTAAAAGTAGTTCAAAGTCCCTGCTGGAGATCATCG
ATACAACGTTGCTGAAGTGTTACCTGCAGACAAACGACTCTCTGGTGGCA
CCACTGCTACGCCTAAACCAGTGCCACTTAGAGGAGTCGGAAAAGACGTT
GAAGAAGCACAACAAGATCTCTGAACTTATCATCCTCTACCAGATGAAGG
GCAAGCACAAGGAGGCCCTTAAACTGCTTCGAGAGCAGGCGAGCATCGAA
GGATCTGTGCTGCAGGGTCGCAAGCGTACCATACGCTATCTTCAGGAGCT
GGGTGGTGATCATCTGCCGCTGATCTTTGAGTTCGCTGACTGGGTCTTAA
ACGATAATCCCGAGGAAGGCCTAACCATTTTCACCGACGAACTTATTGAA
GTGGAATCCCTGCCGCGCGCCAAAGTTCTTGATTTTTTTATTAGCAAGCA
CAAAGCACTTGTCATTCCCTATTTGGAGCACGTAATCACTGAATGGAAGG
ACGGCAACACCCTGCTCCACAATGTGCTCCTCAAGCAGTATCGCGAAAAG
GTGCAACGGCTTCTTGCTCAGCAGGAAAAAGGAGAGGAAGTTCCCGAACT
CATTCCGATGCGAGCCAAGCTCTACAAGATGTTGGAGGAGTCCAACGACT
ATTCGCCGGATCGCCTCCTAGAGGAATTTCCAACCAATATACTCTTGGAG
GAGCGTGCCCTAATCCTGGGCAGGCTCAAAAAGCACGACAACGTCCTGTC
CATCTATATTCATGTTCTCGGAGATGTGGCCAAGGCAACGGCCTATGCGG
AAGCCCATTACAAAGAGGACAAGCACATATTTCACACGCTCATTAAGTGC
ATATTAATACCACCAACTCAACCGCTCTATGATGGTGTGCCCTTGCATCC
GGATTTCTCGCAAGTGAATCGAGAGGTGGCCCTGGAAATACTTAACACCC
ACGCCACCAGAATCGATCCATTCGAGATCTTCGAGCACCTTCCCGATGAC
ATGCCCATGCCCCAGCTGGAGAAATACTTGGAGAAATCTATACGTAAAAT
GATGGCCGACAAGCACGAGATGCAGATGATGTGCGGCTTCCTGGAGGCAG
AGTCCACGCGCCTGGAGAATGCCTTGGAGGAGCAGCGAAACATTAGCTTC
GAGTTAAACGAGTCTAGTGTGTGTTCCGAGTGCAAGAAGCGTTTTCAAAC
CCAGTCCGCCTTCGTGCGCTATCCAAATGGGCACATCGTGCACCTATCCT
GCCACGATCGGCTCGCCAGGGCGGCTGCTCAGCAATAAGTGAAATACTCC
AATGTGATAACTGATCAAGGTATAAAGTGCGAATTGAGTGTAAATGTCTG
TATTATTCTGTTTTTAAATAAGCTTTTTCAGTACTCGTATGTAATGGATA
TACTGCAATGCTTATACAATATAATATAGTTTGCATTGATTGATTGTAAC
AATCAACTTGCAGCTAATCATCAACAATTAAAAAAAAAAAAAAAAAAA

GH10703.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:14:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG7146-RA 2986 CG7146-RA 88..2969 1..2882 14410 100 Plus
CG7146.b 2866 CG7146.b 79..2798 1..2720 13600 100 Plus
CG7146.a 2915 CG7146.a 79..2797 1..2719 13595 100 Plus
CG7146.a 2915 CG7146.a 2796..2898 2780..2882 515 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:42:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14096497..14097381 1982..1098 4425 100 Minus
chr3R 27901430 chr3R 14095483..14095978 2879..2384 2480 100 Minus
chr3R 27901430 chr3R 14098053..14098526 600..127 2370 100 Minus
chr3R 27901430 chr3R 14096040..14096443 2385..1982 2020 100 Minus
chr3R 27901430 chr3R 14097742..14097991 850..601 1250 100 Minus
chr3R 27901430 chr3R 14097436..14097684 1098..850 1245 100 Minus
chr3R 27901430 chr3R 14098577..14098704 128..1 640 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:42:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:42:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18272203..18273087 1982..1098 4425 100 Minus
3R 32079331 3R 18271186..18271684 2882..2384 2495 100 Minus
3R 32079331 3R 18273759..18274232 600..127 2370 100 Minus
3R 32079331 3R 18271746..18272149 2385..1982 2020 100 Minus
3R 32079331 3R 18273448..18273697 850..601 1250 100 Minus
3R 32079331 3R 18273142..18273390 1098..850 1245 100 Minus
3R 32079331 3R 18274283..18274410 128..1 640 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:37:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 18013034..18013918 1982..1098 4425 100 Minus
3R 31820162 3R 18012017..18012515 2882..2384 2495 100 Minus
3R 31820162 3R 18014590..18015063 600..127 2370 100 Minus
3R 31820162 3R 18012577..18012980 2385..1982 2020 100 Minus
3R 31820162 3R 18014279..18014528 850..601 1250 100 Minus
3R 31820162 3R 18013973..18014221 1098..850 1245 100 Minus
3R 31820162 3R 18015114..18015241 128..1 640 100 Minus
Blast to na_te.dros performed on 2019-03-16 02:42:42 has no hits.

GH10703.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:43:32 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14095483..14095976 2386..2879 100 <- Minus
chr3R 14096040..14096442 1983..2385 100 <- Minus
chr3R 14096497..14097380 1099..1982 100 <- Minus
chr3R 14097436..14097683 851..1098 100 <- Minus
chr3R 14097742..14097991 601..850 100 <- Minus
chr3R 14098053..14098525 128..600 100 <- Minus
chr3R 14098578..14098704 1..127 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:33:41 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
CG7146-RA 1..2631 58..2688 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:54:42 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
CG7146-RA 1..2631 58..2688 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:14:17 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
CG7146-RA 1..2631 58..2688 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:23:45 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
CG7146-RA 1..2631 58..2688 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:17:57 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
Vps39-RA 1..2631 58..2688 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:40:13 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
CG7146-RA 37..2915 1..2879 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:54:41 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
CG7146-RA 37..2915 1..2879 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:14:17 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
CG7146-RA 37..2915 1..2879 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:23:45 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
CG7146-RA 37..2915 1..2879 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:17:57 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
Vps39-RA 37..2915 1..2879 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:43:32 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18271189..18271682 2386..2879 100 <- Minus
3R 18271746..18272148 1983..2385 100 <- Minus
3R 18272203..18273086 1099..1982 100 <- Minus
3R 18273142..18273389 851..1098 100 <- Minus
3R 18273448..18273697 601..850 100 <- Minus
3R 18273759..18274231 128..600 100 <- Minus
3R 18274284..18274410 1..127 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:43:32 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18271189..18271682 2386..2879 100 <- Minus
3R 18271746..18272148 1983..2385 100 <- Minus
3R 18272203..18273086 1099..1982 100 <- Minus
3R 18273142..18273389 851..1098 100 <- Minus
3R 18273448..18273697 601..850 100 <- Minus
3R 18273759..18274231 128..600 100 <- Minus
3R 18274284..18274410 1..127 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:43:32 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18271189..18271682 2386..2879 100 <- Minus
3R 18271746..18272148 1983..2385 100 <- Minus
3R 18272203..18273086 1099..1982 100 <- Minus
3R 18273142..18273389 851..1098 100 <- Minus
3R 18273448..18273697 601..850 100 <- Minus
3R 18273759..18274231 128..600 100 <- Minus
3R 18274284..18274410 1..127 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:14:17 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14098864..14099111 851..1098 100 <- Minus
arm_3R 14099170..14099419 601..850 100 <- Minus
arm_3R 14097925..14098808 1099..1982 100 <- Minus
arm_3R 14096911..14097404 2386..2879 100 <- Minus
arm_3R 14097468..14097870 1983..2385 100 <- Minus
arm_3R 14099481..14099953 128..600 100 <- Minus
arm_3R 14100006..14100132 1..127 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:00:53 Download gff for GH10703.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18012020..18012513 2386..2879 100 <- Minus
3R 18012577..18012979 1983..2385 100 <- Minus
3R 18013034..18013917 1099..1982 100 <- Minus
3R 18013973..18014220 851..1098 100 <- Minus
3R 18014279..18014528 601..850 100 <- Minus
3R 18014590..18015062 128..600 100 <- Minus
3R 18015115..18015241 1..127 100   Minus

GH10703.hyp Sequence

Translation from 1 to 2687

> GH10703.hyp
LFYENKLRRRRPKFFHLAKMHQAYSVHSILKQGVQIESIAAYGNHVILGT
RSGQLIMYSVDEETGVDMRMFNKNFSRKPITQMEVIASENLLFVLTDLQV
QVCDIRRIESNFAFMHSAPDTKGCTLFTMDVDTPKSTTGRVATVIRVCCA
IRRRLVFFFWKEDKLNSLELIIELSDVPRTLCWVGHAVCVGFKDEYVVYD
ISGKAPKKHNLFLTSSSISRDPCICLIRNNMLGISKDSYLVVVDPSQYKE
SDGINNSTDVRPAAMDSNSSLTPLLWSSPLLDLVWDEPFAVGRVNNAIEV
RSLVGKDTLVQTIPELQKTKFLVHADKGTIFAAATSELWCIRMVEIPIQR
QQLLQQKKFQLAIELTQISDEPAADRAQTIRQIHMLYAKELFTNKEFSAA
MKEFEKAAIDPYDVIRLFPNLVPEPKPGTEDVTVPTSSTPALEDSDLENA
YLALIEYLAWARQREVVKLRDTKSSSKSLLEIIDTTLLKCYLQTNDSLVA
PLLRLNQCHLEESEKTLKKHNKISELIILYQMKGKHKEALKLLREQASIE
GSVLQGRKRTIRYLQELGGDHLPLIFEFADWVLNDNPEEGLTIFTDELIE
VESLPRAKVLDFFISKHKALVIPYLEHVITEWKDGNTLLHNVLLKQYREK
VQRLLAQQEKGEEVPELIPMRAKLYKMLEESNDYSPDRLLEEFPTNILLE
ERALILGRLKKHDNVLSIYIHVLGDVAKATAYAEAHYKEDKHIFHTLIKC
ILIPPTQPLYDGVPLHPDFSQVNREVALEILNTHATRIDPFEIFEHLPDD
MPMPQLEKYLEKSIRKMMADKHEMQMMCGFLEAESTRLENALEEQRNISF
ELNESSVCSECKKRFQTQSAFVRYPNGHIVHLSCHDRLARAAAQQ*

GH10703.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:57:37
Subject Length Description Subject Range Query Range Score Percent Strand
Vps39-PA 876 CG7146-PA 1..876 20..895 4510 100 Plus

GH10703.pep Sequence

Translation from 57 to 2687

> GH10703.pep
MHQAYSVHSILKQGVQIESIAAYGNHVILGTRSGQLIMYSVDEETGVDMR
MFNKNFSRKPITQMEVIASENLLFVLTDLQVQVCDIRRIESNFAFMHSAP
DTKGCTLFTMDVDTPKSTTGRVATVIRVCCAIRRRLVFFFWKEDKLNSLE
LIIELSDVPRTLCWVGHAVCVGFKDEYVVYDISGKAPKKHNLFLTSSSIS
RDPCICLIRNNMLGISKDSYLVVVDPSQYKESDGINNSTDVRPAAMDSNS
SLTPLLWSSPLLDLVWDEPFAVGRVNNAIEVRSLVGKDTLVQTIPELQKT
KFLVHADKGTIFAAATSELWCIRMVEIPIQRQQLLQQKKFQLAIELTQIS
DEPAADRAQTIRQIHMLYAKELFTNKEFSAAMKEFEKAAIDPYDVIRLFP
NLVPEPKPGTEDVTVPTSSTPALEDSDLENAYLALIEYLAWARQREVVKL
RDTKSSSKSLLEIIDTTLLKCYLQTNDSLVAPLLRLNQCHLEESEKTLKK
HNKISELIILYQMKGKHKEALKLLREQASIEGSVLQGRKRTIRYLQELGG
DHLPLIFEFADWVLNDNPEEGLTIFTDELIEVESLPRAKVLDFFISKHKA
LVIPYLEHVITEWKDGNTLLHNVLLKQYREKVQRLLAQQEKGEEVPELIP
MRAKLYKMLEESNDYSPDRLLEEFPTNILLEERALILGRLKKHDNVLSIY
IHVLGDVAKATAYAEAHYKEDKHIFHTLIKCILIPPTQPLYDGVPLHPDF
SQVNREVALEILNTHATRIDPFEIFEHLPDDMPMPQLEKYLEKSIRKMMA
DKHEMQMMCGFLEAESTRLENALEEQRNISFELNESSVCSECKKRFQTQS
AFVRYPNGHIVHLSCHDRLARAAAQQ*

GH10703.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:53:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23148-PA 873 GF23148-PA 1..872 1..876 3445 72.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:53:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16574-PA 876 GG16574-PA 1..876 1..876 4414 95 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:53:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19027-PA 866 GH19027-PA 1..866 1..875 3260 68.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:15
Subject Length Description Subject Range Query Range Score Percent Strand
Vps39-PA 876 CG7146-PA 1..876 1..876 4510 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:53:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22840-PA 865 GI22840-PA 1..865 1..875 3333 71.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:53:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22026-PA 877 GL22026-PA 1..877 1..876 3873 83.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:53:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20136-PA 879 GA20136-PA 1..879 1..876 3893 83.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:53:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15311-PA 876 GM15311-PA 1..876 1..876 4613 97.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:53:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20189-PA 876 GD20189-PA 1..876 1..876 4640 98.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:53:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24699-PA 866 GJ24699-PA 1..866 1..875 3325 70.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:53:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22781-PA 868 GK22781-PA 1..868 1..876 3458 73.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:53:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25221-PA 876 GE25221-PA 1..876 1..876 4424 95.4 Plus
Dyak\GE25220-PA 149 GE25220-PA 1..147 1..148 721 93.2 Plus