Clone GH10732 Report

Search the DGRC for GH10732

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:107
Well:32
Vector:pOT2
Associated Gene/TranscriptCG9133-RB
Protein status:GH10732.pep: gold
Preliminary Size:3686
Sequenced Size:1523

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9133 2001-01-01 Release 2 assignment
CG32332 2002-06-12 Blastp of sequenced clone
CG32332 2003-01-01 Sim4 clustering to Release 3
CG9133 2008-04-29 Release 5.5 accounting
CG9133 2008-08-15 Release 5.9 accounting
CG9130 2008-08-15 Release 5.9 accounting
CG9133 2008-12-18 5.12 accounting
CG9130 2008-12-18 5.12 accounting

Clone Sequence Records

GH10732.complete Sequence

1523 bp (1523 high quality bases) assembled on 2002-06-12

GenBank Submission: AY122106

> GH10732.complete
ATCACTCGTTTAGCATTTGTTTTATACATTCGAACGGGAAATGTTGTCTG
CCGCACAAAATACAGAAAAATAAAATCTTTCGTTGTTGTTACCCGAGTTT
TGGATGGAAATTAAAACAGAGAATCACGCGAAAACGAGCTGTGCGGAAAT
TGCGCCACTTACTGGTGAAGTACAATATCCAAATTGAGAATTGAAGGCTT
TCGGAATTGAGATTTCAGCTTGAGCCTAGTGAATAATTGTATTGACTTAC
ACACTCAATCACTCAACCGCACAACATGGCCAAGAAGAGGGGAAGAAAGG
GCAAGAAGGGCAAGAAGCCAAAGGTCGACTGCAAGTTCAAGATCACCAAT
GAGATGCTCAAGCCCATGAACGAGAATGTGGACGACTGTGATGGCTGCTG
TCAGTGCGCCTGCGATTGCGACTGCAGTCCGGAGTTGGCTCCCTGCTTCA
TCCAGCCGACCAAGCCGGATCCGGGTCCGGAGGCGTACGACGAGTTCGAG
GCCTGCCTCAATGGCAGCGGTCTGACCATACGCGTACTCAAGAACACCCA
CAAGGTGGAGAGCGTGATGGATGGCAGCGAGACTGCGCCCAATCTGGGCG
CAGGCGATGATCCCTGCTATCGCGATGACCCCAATGACTGCGAGCCCGCA
AAGGAGTCCTGCCTGCACGATATGCTCCAGCGCAGCTCCTTCGCTCGCAA
CCACATCAAGCGCCGGACCGGCGGCCGCATCATCAACCACCCGAACATCC
CCAAGGTGCGAGCCAATATCAAGTACTCTGGGAACGATGCCTGCGAGACC
GACAACTACTACGTGCCCTTCTCGAAGATCAAGGAGGCCTGCGACTTCCA
GGAGGCCAAGGTCGACTGCTACCGCCAGCGACTCTGCGGCGGATCCGATC
CCATCGTGCCCGCGCACTGTCCCGTCCAGAACCAGCGATCATGTTGCATG
CAGGTCGAGCGGAAGGACATCATGGACACCATGAAGGGTGTCAATTTGGA
CACAAGGCGCAAGGGTATCGAGGTTTGCTACAAGACCTGCGAGGAGACCG
ACAGCGACGTGTTCCTAGTAAAACTGGGAAGTAAGGCCAAGTCGCAGCAC
AAGAAGAATACCATCGAGATCGAGCTGCGGACGCCCAAGCAGCCCGTAAC
CCTTCCGATCAGCAAGGTGACCACGGAGACCTATGTTTCCGAGGAGATGC
TAACCGGTGGCAAGAAGGGGAAGAAGGGCAAGAAGGGCAAGGGCAAGAAG
GGCAAGGGCAAGAAGAAGAAGTAGACCAAGAGATCCGTAGGCGGATCCCA
TTCCCATCGACCGGACTTGACGCTTACCCTTTCGGAACACATCCTTTGGC
ATTTTGGAAGCGACTCTTTGAAAATTCACAGCAGCAATTATTGAAATTTG
GCTCTGGTACTAACCCATTCATATTAACCCGTCCAGTAAGATGCACGAAC
ACTCACTTTTTCGACTAGTTACGTAAATGTATGCTTTTGATTGAATTAAA
ATTAAGAAAAAAAAAAAAAAAAA

GH10732.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:48:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG9133-RB 1538 CG9133-RB 16..1532 1..1517 7585 100 Plus
CG9130-RA 3038 CG9130-RA 1642..3032 127..1517 6955 100 Plus
CG9133-RC 3038 CG9133-RC 1642..3032 127..1517 6955 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:08:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1253912..1254560 376..1024 3170 99.2 Plus
chr3L 24539361 chr3L 1254999..1255484 1021..1506 2415 99.8 Plus
chr3L 24539361 chr3L 1253590..1253838 127..375 1230 99.6 Plus
chr3L 24539361 chr3L 1253382..1253507 1..126 615 99.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:43:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:08:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1254398..1255046 376..1024 3245 100 Plus
3L 28110227 3L 1255486..1255982 1021..1517 2485 100 Plus
3L 28110227 3L 1254076..1254324 127..375 1245 100 Plus
3L 28110227 3L 1253868..1253993 1..126 630 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:21:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 1254398..1255046 376..1024 3245 100 Plus
3L 28103327 3L 1255486..1255982 1021..1517 2485 100 Plus
3L 28103327 3L 1254076..1254324 127..375 1245 100 Plus
3L 28103327 3L 1253868..1253993 1..126 630 100 Plus
Blast to na_te.dros performed 2019-03-16 06:08:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 4958..5028 265..333 116 66.7 Plus
TART-C 11124 TART-C TARTC 11124bp 6414..6484 265..333 116 66.7 Plus
Dsil\Loa 7779 Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). 3630..3710 794..873 114 61.7 Plus

GH10732.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:09:37 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1253382..1253507 1..126 99 -> Plus
chr3L 1253590..1253838 127..375 99 -> Plus
chr3L 1253912..1254558 376..1022 99 -> Plus
chr3L 1255001..1255484 1023..1506 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:33:48 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RB 1..999 276..1274 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:23:33 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RB 1..999 276..1274 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:38:23 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RC 1..999 276..1274 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:14:14 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RB 1..999 276..1274 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:12:20 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RC 1..999 276..1274 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:50:41 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RB 16..1521 1..1506 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:23:33 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RB 16..1521 1..1506 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:38:23 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RB 16..1521 1..1506 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:14:14 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RB 16..1521 1..1506 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:12:20 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RB 16..1521 1..1506 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:37 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1253868..1253993 1..126 100 -> Plus
3L 1254076..1254324 127..375 100 -> Plus
3L 1254398..1255044 376..1022 100 -> Plus
3L 1255488..1255971 1023..1506 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:37 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1253868..1253993 1..126 100 -> Plus
3L 1254076..1254324 127..375 100 -> Plus
3L 1254398..1255044 376..1022 100 -> Plus
3L 1255488..1255971 1023..1506 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:37 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1253868..1253993 1..126 100 -> Plus
3L 1254076..1254324 127..375 100 -> Plus
3L 1254398..1255044 376..1022 100 -> Plus
3L 1255488..1255971 1023..1506 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:38:23 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1253868..1253993 1..126 100 -> Plus
arm_3L 1254076..1254324 127..375 100 -> Plus
arm_3L 1254398..1255044 376..1022 100 -> Plus
arm_3L 1255488..1255971 1023..1506 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:47:09 Download gff for GH10732.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1254076..1254324 127..375 100 -> Plus
3L 1254398..1255044 376..1022 100 -> Plus
3L 1255488..1255971 1023..1506 100   Plus
3L 1253868..1253993 1..126 100 -> Plus

GH10732.pep Sequence

Translation from 275 to 1273

> GH10732.pep
MAKKRGRKGKKGKKPKVDCKFKITNEMLKPMNENVDDCDGCCQCACDCDC
SPELAPCFIQPTKPDPGPEAYDEFEACLNGSGLTIRVLKNTHKVESVMDG
SETAPNLGAGDDPCYRDDPNDCEPAKESCLHDMLQRSSFARNHIKRRTGG
RIINHPNIPKVRANIKYSGNDACETDNYYVPFSKIKEACDFQEAKVDCYR
QRLCGGSDPIVPAHCPVQNQRSCCMQVERKDIMDTMKGVNLDTRRKGIEV
CYKTCEETDSDVFLVKLGSKAKSQHKKNTIEIELRTPKQPVTLPISKVTT
ETYVSEEMLTGGKKGKKGKKGKGKKGKGKKKK*

GH10732.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:30:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24445-PA 346 GF24445-PA 16..320 17..309 1297 85.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:30:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14771-PA 334 GG14771-PA 1..332 1..332 1707 97 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:30:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16009-PA 351 GH16009-PA 17..323 17..309 1012 72.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:04:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG9133-PB 332 CG9133-PB 1..332 1..332 1819 100 Plus
CG9133-PC 332 CG9133-PC 1..332 1..332 1819 100 Plus
CG9133-PD 309 CG9133-PD 8..309 31..332 1640 98.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:30:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13045-PA 343 GI13045-PA 18..325 17..312 1048 71.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:30:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16167-PA 332 GL16167-PA 16..315 17..311 1091 74.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:30:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28412-PA 332 GA28412-PA 16..315 17..311 1127 74.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:30:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14392-PA 332 GM14392-PA 1..332 1..332 1722 98.2 Plus
Dsec\GM13185-PA 668 GM13185-PA 501..659 92..250 834 96.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:30:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13600-PA 347 GD13600-PA 17..325 17..310 1312 87.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:30:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12141-PA 336 GJ12141-PA 18..307 17..309 1093 76.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:30:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21154-PA 323 GK21154-PA 14..303 17..309 1084 73.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:30:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21135-PA 333 GE21135-PA 1..333 1..332 1702 96.7 Plus

GH10732.hyp Sequence

Translation from 275 to 1273

> GH10732.hyp
MAKKRGRKGKKGKKPKVDCKFKITNEMLKPMNENVDDCDGCCQCACDCDC
SPELAPCFIQPTKPDPGPEAYDEFEACLNGSGLTIRVLKNTHKVESVMDG
SETAPNLGAGDDPCYRDDPNDCEPAKESCLHDMLQRSSFARNHIKRRTGG
RIINHPNIPKVRANIKYSGNDACETDNYYVPFSKIKEACDFQEAKVDCYR
QRLCGGSDPIVPAHCPVQNQRSCCMQVERKDIMDTMKGVNLDTRRKGIEV
CYKTCEETDSDVFLVKLGSKAKSQHKKNTIEIELRTPKQPVTLPISKVTT
ETYVSEEMLTGGKKGKKGKKGKGKKGKGKKKK*

GH10732.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:58:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG9133-PB 332 CG9133-PB 1..332 1..332 1819 100 Plus
CG9133-PC 332 CG9133-PC 1..332 1..332 1819 100 Plus
CG9133-PD 309 CG9133-PD 8..309 31..332 1640 98.7 Plus