Clone GH10745 Report

Search the DGRC for GH10745

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:107
Well:45
Vector:pOT2
Associated Gene/TranscriptCG8417-RA
Protein status:GH10745.pep: gold
Preliminary Size:1769
Sequenced Size:1805

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8417 2001-09-19 Blastp of sequenced clone
CG8417 2003-01-01 Sim4 clustering to Release 3
CG8417 2008-04-29 Release 5.5 accounting
CG8417 2008-08-15 Release 5.9 accounting
CG8202 2008-08-15 Release 5.9 accounting
CG8417 2008-12-18 5.12 accounting
CG8202 2008-12-18 5.12 accounting

Clone Sequence Records

GH10745.complete Sequence

1805 bp (1805 high quality bases) assembled on 2001-09-19

GenBank Submission: AY059444

> GH10745.complete
AAAGGAGTCGGTGCGGGTCGAGGTTTGCAAAAACATTCTCAGTTTCTACA
AACAGAATAGTGACGAATATACTTGCGACGCTGTGGTAACAAACGCATTG
ATGTATCTCGGGAAGATCTTGAACGATTCAGTGAATGCCCTGTCCGTGGA
TGATGAACGTCGTCAGATAGCTCAGCTCATCAATGTCTTTATTCACAAAG
TTCACTTTGGAAATGACTTGGAGCAGCAGCTAAGTTTTTATGTGGAGGCG
CGGGGCACGTTCAGCAACCTGGACGCAGTATACGTTACTCTGGTGCATGC
GGCCTGCAAGTTAGCCACCCGAAACCGTTCGAAATCAACGGGTTTTGTTA
AGGCCTGCTCGTGCCGAATTCGGCACGAGATTTAAAGTAACAGTGGTGGA
AACACACCAAATTATTTCGGCAATAAAATCGAAATTACAAACTTCCAGAA
AGCTGTTATCTATATAAAAAGGTTGACCTCAAACGCAGTACGGCGAATTT
TGGAAGGCAATCGGTGCGGTGAAATGGAGCTGACTGGATGGGTGAAGAAC
TACGGCTGGGGCCGCAAGGGCATCAACTCGGCGGTGGCCCAGCTGGCAAT
GGCCAATGATCCGGACTTTCGTCTGAACGAGGAGGAGACCTATGCGGAAA
TGTGGATGGGCACGCATGTGTGCGGTGTGTCCGTGGTCAAGGAAACCGGA
GAGACTCTGGACCGAGTGCTAAAGAAGGACCTTTCATACCTGTTCAAGGT
GCTAAGCATCAACAAGGCACTCAGCATCCAGGTGCATCCGAACAAGTGCG
AAGCGGAGCGCCTGCACAAGGAGCGCCCGGATATCTACAAGGATCCCAAT
CACAAGCCGGAACTGGCCATTGCCCTCACGCCCTTTCTGGCCCTCGTGGG
ATTTATGTCAGCCGAAGATATCAGGGACTACATCGATGAGTTCCAGCCGC
TGAGTAAACTCATTGGCAAGGAGGCTGTGGATCAGCTCCATGACTCGACC
AACTCGGAAAGCGTTAAGTTGTGCTACGAGAAGCTGATGAAGACCGAAGA
GCCGGTGATAGCCAAGTGCATCAGTGAAATAGCCAAGGATTACCAAAACG
AACTGAAATCCAACGATCTGCTTGAGGTGTTCACCAAGGTCAACAAAGAC
TTCCCCGGCGATGTGGGCGTACTGTCCCTGTTCTTCCTCAACCTAATCCG
CCTGCAGCCCGGCCAGGCGATCTACTTGGGCGCGAACGAGATTCATGCCT
ACCTGGACGGCGACTGTGTGGAGTGCATGGCTTGCTCGGACAATGTGATA
CGGGCGGGCCTAACGCCCAAGTACAAGGATGTGGACCAGCTGCTGGAATC
TGTGATCTTCGAAAGTTCGTATAAGGATCGCAAGGAGTTCATTCCGTACC
GCATAGATGACCAGGTCCAGGTCTATATTCCGCCAGTATCCGACTTTGCA
GTGATAAATGTGAATATCGAACACTCGCTGGAGTCGTACAAGCTGGAGAT
ACAAGCATTCGGCTCCATATTGATAGTTCTAAAGGGATCCCGCATTCTTA
AATTGAAAACCCAGCAGGGAGATAAGGAGATCTTGGTAACCCGCGGCAGC
ATTGTGTACATTCCCGTCGAGGCGGCGCCGGAAATCGAATTCGCCCAGTC
CGACGATTGCGACGAGGACTTCAGCGGCTACATAGCAACCAGCAACTACT
TTCGAGTGCCCTAAAATTCTCAGTTAATCGAAATATTTTGTACAGTGCAA
TAAATCCATTAACACGTTTTGGTGGTGAAAAAAAAAAAAAAAAAAAAAAA
AAAAA

GH10745.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:23:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG8417.a 2125 CG8417.a 39..1438 380..1779 7000 100 Plus
CG8417-RA 1437 CG8417-RA 39..1437 380..1778 6995 100 Plus
CG8202.a 3216 CG8202.a 1843..2200 1..358 1790 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5586367..5587044 1100..1777 3375 99.9 Plus
chr3R 27901430 chr3R 5585684..5586314 470..1100 3125 99.7 Plus
chr3R 27901430 chr3R 4560386..4560608 136..358 1115 100 Plus
chr3R 27901430 chr3R 4560190..4560324 1..135 675 100 Plus
chr3R 27901430 chr3R 5585470..5585563 380..473 470 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:43:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:40:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9760531..9761210 1100..1779 3400 100 Plus
3R 32079331 3R 9759848..9760478 470..1100 3155 100 Plus
3R 32079331 3R 8734420..8734642 136..358 1115 100 Plus
3R 32079331 3R 8734224..8734358 1..135 675 100 Plus
3R 32079331 3R 9759634..9759727 380..473 470 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:46:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9501362..9502041 1100..1779 3400 100 Plus
3R 31820162 3R 9500679..9501309 470..1100 3155 100 Plus
3R 31820162 3R 8475251..8475473 136..358 1115 100 Plus
3R 31820162 3R 8475055..8475189 1..135 675 100 Plus
3R 31820162 3R 9500465..9500558 380..473 470 100 Plus
Blast to na_te.dros performed on 2019-03-16 15:40:53 has no hits.

GH10745.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:41:39 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5585470..5585561 380..471 100 -> Plus
chr3R 5585686..5586314 472..1100 99 -> Plus
chr3R 5586368..5587044 1101..1777 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:33:49 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
CG8417-RA 1..1191 524..1714 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:08:36 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
CG8417-RA 1..1191 524..1714 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:51:22 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
CG8417-RA 1..1191 524..1714 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:39:25 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
CG8417-RA 1..1191 524..1714 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:51:49 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
CG8417-RA 1..1191 524..1714 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:59:11 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
CG8417-RA 38..1435 380..1777 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:08:36 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
CG8417-RA 38..1435 380..1777 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:51:22 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
CG8417-RA 13..1410 380..1777 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:39:25 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
CG8417-RA 38..1435 380..1777 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:51:49 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
CG8417-RA 13..1410 380..1777 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:41:39 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9759634..9759725 380..471 100 -> Plus
3R 9759850..9760478 472..1100 100 -> Plus
3R 9760532..9761208 1101..1777 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:41:39 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9759634..9759725 380..471 100 -> Plus
3R 9759850..9760478 472..1100 100 -> Plus
3R 9760532..9761208 1101..1777 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:41:39 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9759634..9759725 380..471 100 -> Plus
3R 9759850..9760478 472..1100 100 -> Plus
3R 9760532..9761208 1101..1777 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:51:22 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5585356..5585447 380..471 100 -> Plus
arm_3R 5585572..5586200 472..1100 100 -> Plus
arm_3R 5586254..5586930 1101..1777 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:16:52 Download gff for GH10745.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9500465..9500556 380..471 100 -> Plus
3R 9500681..9501309 472..1100 100 -> Plus
3R 9501363..9502039 1101..1777 100   Plus

GH10745.pep Sequence

Translation from 523 to 1713

> GH10745.pep
MELTGWVKNYGWGRKGINSAVAQLAMANDPDFRLNEEETYAEMWMGTHVC
GVSVVKETGETLDRVLKKDLSYLFKVLSINKALSIQVHPNKCEAERLHKE
RPDIYKDPNHKPELAIALTPFLALVGFMSAEDIRDYIDEFQPLSKLIGKE
AVDQLHDSTNSESVKLCYEKLMKTEEPVIAKCISEIAKDYQNELKSNDLL
EVFTKVNKDFPGDVGVLSLFFLNLIRLQPGQAIYLGANEIHAYLDGDCVE
CMACSDNVIRAGLTPKYKDVDQLLESVIFESSYKDRKEFIPYRIDDQVQV
YIPPVSDFAVINVNIEHSLESYKLEIQAFGSILIVLKGSRILKLKTQQGD
KEILVTRGSIVYIPVEAAPEIEFAQSDDCDEDFSGYIATSNYFRVP*

GH10745.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:29:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23036-PA 396 GF23036-PA 1..395 1..395 1737 79.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17103-PA 396 GG17103-PA 1..396 1..396 2026 95.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17406-PA 366 GH17406-PA 1..364 1..394 1515 72.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
Mpi-PA 396 CG8417-PA 1..396 1..396 2050 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:29:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22736-PA 396 GI22736-PA 1..395 1..395 1537 72.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:29:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24302-PA 396 GL24302-PA 1..395 1..395 1717 80 Plus
Dper\GL26959-PA 87 GL26959-PA 1..76 172..247 317 77.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:29:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21062-PA 396 GA21062-PA 1..395 1..395 1716 80 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:29:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23834-PA 396 GM23834-PA 1..396 1..396 2088 98.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:29:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18644-PA 336 GD18644-PA 1..330 1..348 1703 93.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:29:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22739-PA 396 GJ22739-PA 1..394 1..394 1629 75.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:29:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11962-PA 396 GK11962-PA 1..395 1..395 1703 78.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25982-PA 396 GE25982-PA 1..396 1..396 2062 97.5 Plus

GH10745.hyp Sequence

Translation from 523 to 1713

> GH10745.hyp
MELTGWVKNYGWGRKGINSAVAQLAMANDPDFRLNEEETYAEMWMGTHVC
GVSVVKETGETLDRVLKKDLSYLFKVLSINKALSIQVHPNKCEAERLHKE
RPDIYKDPNHKPELAIALTPFLALVGFMSAEDIRDYIDEFQPLSKLIGKE
AVDQLHDSTNSESVKLCYEKLMKTEEPVIAKCISEIAKDYQNELKSNDLL
EVFTKVNKDFPGDVGVLSLFFLNLIRLQPGQAIYLGANEIHAYLDGDCVE
CMACSDNVIRAGLTPKYKDVDQLLESVIFESSYKDRKEFIPYRIDDQVQV
YIPPVSDFAVINVNIEHSLESYKLEIQAFGSILIVLKGSRILKLKTQQGD
KEILVTRGSIVYIPVEAAPEIEFAQSDDCDEDFSGYIATSNYFRVP*

GH10745.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:58:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG8417-PA 396 CG8417-PA 1..396 1..396 2050 100 Plus