Clone GH10766 Report

Search the DGRC for GH10766

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:107
Well:66
Vector:pOT2
Associated Gene/TranscriptCG7148-RA
Protein status:GH10766.pep: gold
Preliminary Size:2200
Sequenced Size:1569

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7148 2001-01-01 Release 2 assignment
CG7148 2001-07-04 Blastp of sequenced clone
CG7148 2003-01-01 Sim4 clustering to Release 3
CG7148 2008-04-29 Release 5.5 accounting
CG7148 2008-08-15 Release 5.9 accounting
CG7148 2008-12-18 5.12 accounting

Clone Sequence Records

GH10766.complete Sequence

1569 bp (1569 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051435

> GH10766.complete
ATTGAGTTGACCTGCTTGAAACGATCCAGAATACAGAAACTATCTCTCGC
TCCGGCTATTTTAACAGACTCTGTACCTAGATTGTGTCGCGAGGATCGCA
TCCCGGGCCATGGCTTCCGAGCCGAGATCCCTAATTCTGCAATTGGACGA
CGACTGTCTGGCCGAGATTTTCGATCGCTTGCAGGACCTGCCGTCGGAAG
TGTCCTTCGCGAGGACTTGCCGGCGAGTGCAGTACATATGTCTGAGCAAG
TGGCGCACCAGCCATGCCTACGAGCAACTGGATCTGGAGAAGTGGCGGGT
ACTGTTGCCCAATCATGAAGACCTGGTCTACTTCCTAACCCAAATGCGTC
CGTACATCAGAGAAATGGGCGGCAGCAGCTGTCTGTGCTCCATTCTAAAA
GATCTGGACGAAATGCACATTGCAGAGCTGCCCATGGTGACCAGCTTCTA
CTACGACCCAGACGGCGTCGATTGCTATCCCACGAACCGAAGCATCCGCA
AGCTGGCCCGCCTGCTGCCGGGCTTGAAAAAGTTGCGCCTTACCACACCC
ATCGACGGGCGGTACCTATCCAACTTCCAGCACCTGCAGGAGCTGCACCT
CTACGAGGACCAGCACAAGGCGTTTGAGCTGCAGCAGAAGTACCTGGACG
AGGTGTGCCGCACGCTGCACGATCTTCGGGTCCTGGACATTAGGACGTAC
GATATGATCAGTAAACTTCAGCTGGGAAACTGCCTGCAGAGCTTTAAGAA
CCTCACTGATCTTAAGCTCAATCTGGCCACCTTGAAACCCATTCTACCCG
CCGTTCTGGAGCTGCCCTCCCTCAGGAAACTGGTGGTGCTGCTGGACAAC
GAGTGGCATATCCCCCCGCTGGTCAGTCCGGATAGCTATGACCACAAGAT
CCGCGAGGTCAGCGAGTTCTACGAGATCATGGCTTTCAAGGCCAAGGACA
TCGTCGGCTTTGCCGTGGACGGGTACTATATGCCCCTTGAACCGGGCTGG
GATGAGAAGCTGCCCATCTGGACGCATCGCAGGCTGAAGCGCCTGGCCAT
TTGCAGCTGGACTCATTCGGCAGACTACCTAAAGCGCTATACCTGTATGA
CAGAGCTGCAGCTGCTCTGCGTGCGCAACTGGAATGACCTAAGCGACGAA
ATCCTCTTAGAATTCGTGGAACTCTGTCCACGATTGGAACACCTCGACGT
GTCCTACTGCCGAAATCTGACGCCAACATTTTTGCCACGGGCCTTGAGTA
TTCTTAAGCGGCGGGAGCCGTTCAAGCAGAAGACGGGAGTTGGACGTTCG
CCACCTCTGAAGCTCTACTACGACCTAAGTGGCTTTGAGGACTTTGTGGA
TAGAGCGAACCTAAAGAGCTCTTTGGAATATAGAGGATATATTGTCTTCA
CCGCCGACTTTCCAGTCGACTCGGAACGCGGTCTGAGCTTTGTGGACCGC
GGATACCAATTTGAATTTCACTGACCTCAAAATATGTAAATATACAAGCG
TAGATTCATACAATAATTTATTATTAAAATTTATGTTGCACAAAGTAAAA
AAAAAAAAAAAAAAAAAAA

GH10766.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:36:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-RA 1756 CG7148-RA 121..1667 1..1547 7735 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:33:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 21819725..21820422 1357..660 3490 100 Minus
chr3L 24539361 chr3L 21820481..21821140 660..1 3300 100 Minus
chr3L 24539361 chr3L 21819479..21819668 1546..1357 950 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:43:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:33:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21830790..21831487 1357..660 3490 100 Minus
3L 28110227 3L 21831546..21832205 660..1 3300 100 Minus
3L 28110227 3L 21830543..21830733 1547..1357 955 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:58:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 21823890..21824587 1357..660 3490 100 Minus
3L 28103327 3L 21824646..21825305 660..1 3300 100 Minus
3L 28103327 3L 21823643..21823833 1547..1357 955 100 Minus
Blast to na_te.dros performed on 2019-03-16 02:33:16 has no hits.

GH10766.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:34:20 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 21819725..21820421 661..1357 100 <- Minus
chr3L 21820481..21821140 1..660 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:33:52 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 1..1365 110..1474 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:27:54 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 1..1365 110..1474 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:00:43 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 1..1365 110..1474 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:01:14 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 1..1365 110..1474 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:15:03 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 1..1365 110..1474 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:27:37 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 1..1546 1..1546 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:27:54 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 1..1546 1..1546 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:00:43 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 49..1594 1..1546 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:01:14 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 1..1546 1..1546 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:15:03 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
CG7148-RA 49..1594 1..1546 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:34:20 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21830544..21830732 1358..1546 100 <- Minus
3L 21830790..21831486 661..1357 100 <- Minus
3L 21831546..21832205 1..660 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:34:20 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21830544..21830732 1358..1546 100 <- Minus
3L 21830790..21831486 661..1357 100 <- Minus
3L 21831546..21832205 1..660 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:34:20 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21830544..21830732 1358..1546 100 <- Minus
3L 21830790..21831486 661..1357 100 <- Minus
3L 21831546..21832205 1..660 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:00:43 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21823644..21823832 1358..1546 100 <- Minus
arm_3L 21823890..21824586 661..1357 100 <- Minus
arm_3L 21824646..21825305 1..660 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:39:05 Download gff for GH10766.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21823890..21824586 661..1357 100 <- Minus
3L 21824646..21825305 1..660 100   Minus
3L 21823644..21823832 1358..1546 100 <- Minus

GH10766.pep Sequence

Translation from 109 to 1473

> GH10766.pep
MASEPRSLILQLDDDCLAEIFDRLQDLPSEVSFARTCRRVQYICLSKWRT
SHAYEQLDLEKWRVLLPNHEDLVYFLTQMRPYIREMGGSSCLCSILKDLD
EMHIAELPMVTSFYYDPDGVDCYPTNRSIRKLARLLPGLKKLRLTTPIDG
RYLSNFQHLQELHLYEDQHKAFELQQKYLDEVCRTLHDLRVLDIRTYDMI
SKLQLGNCLQSFKNLTDLKLNLATLKPILPAVLELPSLRKLVVLLDNEWH
IPPLVSPDSYDHKIREVSEFYEIMAFKAKDIVGFAVDGYYMPLEPGWDEK
LPIWTHRRLKRLAICSWTHSADYLKRYTCMTELQLLCVRNWNDLSDEILL
EFVELCPRLEHLDVSYCRNLTPTFLPRALSILKRREPFKQKTGVGRSPPL
KLYYDLSGFEDFVDRANLKSSLEYRGYIVFTADFPVDSERGLSFVDRGYQ
FEFH*

GH10766.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23504-PA 456 GF23504-PA 1..453 1..453 1936 79.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:10:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13196-PA 454 GG13196-PA 1..454 1..454 2236 92.5 Plus
Dere\GG22626-PA 447 GG22626-PA 42..376 19..365 236 25.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:10:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17139-PA 467 GH17139-PA 22..466 9..453 1653 67.9 Plus
Dgri\GH15067-PA 445 GH15067-PA 24..374 5..365 231 25.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-PA 454 CG7148-PA 1..454 1..454 2419 100 Plus
CG14317-PA 448 CG14317-PA 43..374 19..362 247 25.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:10:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11747-PA 468 GI11747-PA 16..467 2..453 1631 66.4 Plus
Dmoj\GI23712-PA 445 GI23712-PA 33..374 30..365 240 26.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:10:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25325-PA 356 GL25325-PA 1..355 86..453 1320 67.1 Plus
Dper\GL12587-PA 449 GL12587-PA 43..378 19..365 256 26 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:10:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20138-PA 463 GA20138-PA 15..462 5..453 1662 68.2 Plus
Dpse\GA12904-PA 449 GA12904-PA 43..378 19..365 256 26 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:10:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22107-PA 454 GM22107-PA 1..454 1..454 2342 97.4 Plus
Dsec\GM15274-PA 447 GM15274-PA 42..376 19..365 226 24.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:10:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12083-PA 125 GD12083-PA 1..125 330..454 626 94.4 Plus
Dsim\GD19199-PA 411 GD19199-PA 115..340 125..365 221 27.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:10:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13457-PA 467 GJ13457-PA 16..466 3..453 1672 68.5 Plus
Dvir\GJ23271-PA 445 GJ23271-PA 24..374 5..365 252 25.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:10:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20358-PA 467 GK20358-PA 21..466 7..453 1516 64.4 Plus
Dwil\GK11239-PA 444 GK11239-PA 37..370 19..362 231 24.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:10:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19518-PA 454 GE19518-PA 1..454 1..454 2186 90.3 Plus
Dyak\GE19519-PA 233 GE19519-PA 94..233 315..454 693 90.7 Plus
Dyak\GE25510-PA 447 GE25510-PA 42..381 19..369 238 25.7 Plus

GH10766.hyp Sequence

Translation from 109 to 1473

> GH10766.hyp
MASEPRSLILQLDDDCLAEIFDRLQDLPSEVSFARTCRRVQYICLSKWRT
SHAYEQLDLEKWRVLLPNHEDLVYFLTQMRPYIREMGGSSCLCSILKDLD
EMHIAELPMVTSFYYDPDGVDCYPTNRSIRKLARLLPGLKKLRLTTPIDG
RYLSNFQHLQELHLYEDQHKAFELQQKYLDEVCRTLHDLRVLDIRTYDMI
SKLQLGNCLQSFKNLTDLKLNLATLKPILPAVLELPSLRKLVVLLDNEWH
IPPLVSPDSYDHKIREVSEFYEIMAFKAKDIVGFAVDGYYMPLEPGWDEK
LPIWTHRRLKRLAICSWTHSADYLKRYTCMTELQLLCVRNWNDLSDEILL
EFVELCPRLEHLDVSYCRNLTPTFLPRALSILKRREPFKQKTGVGRSPPL
KLYYDLSGFEDFVDRANLKSSLEYRGYIVFTADFPVDSERGLSFVDRGYQ
FEFH*

GH10766.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG7148-PA 454 CG7148-PA 1..454 1..454 2419 100 Plus
CG14317-PA 448 CG14317-PA 43..374 19..362 247 25.2 Plus