BDGP Sequence Production Resources |
Search the DGRC for GH10767
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 107 |
Well: | 67 |
Vector: | pOT2 |
Associated Gene/Transcript | Lsd-1-RC |
Protein status: | GH10767.pep: gold |
Preliminary Size: | 1539 |
Sequenced Size: | 1424 |
Gene | Date | Evidence |
---|---|---|
CG10374 | 2001-01-01 | Release 2 assignment |
CG10374 | 2001-07-04 | Blastp of sequenced clone |
CG10374 | 2003-01-01 | Sim4 clustering to Release 3 |
Lsd-1 | 2008-04-29 | Release 5.5 accounting |
Lsd-1 | 2008-08-15 | Release 5.9 accounting |
Lsd-1 | 2008-12-18 | 5.12 accounting |
1424 bp assembled on 2006-11-09
GenBank Submission: AY051436
> GH10767.complete AACAGTTCTCGCATCTCAACCGAATCTTCTCGAGAAATCCCAACACAAAT GGCAACTGCAACCAGCGGCAGTGGACTCCATCTGGAGGCCATCGATCGCA TCGGCTCCATTCCCCTTGTGGAATCCAGTGTGAAGCGGGTGGAGACCATC TACGATAAGGTGAAGAACAACAATAGGCTATTCTCATGGTATTTTGAGAC GGCGGAGGCCACCATTTCGGCCGCCTACGAAACCATCCAGCCGGCGGTCA AGCTCTTCGAGCCATCCATTCAGCGCCTGGACAACGTGATGTGCAAAAGC CTGGACATTCTGGAGCAGCGCATACCACTGGTCTATCTGCCGCCCGAAAT GATGTACTGGAACACCAAGGAGTACATGTCCGATCACCTGGTGCGTCCGG TTCTGAAACGCGCCGATTCTGTCAAGCAAATCGGTAATGCTGTCCTCGAG AGTCCACTTACCACTTATGCAGCCGAGCGCATTGATGGCGCTTTCACAGT CGGCGATAAGTTCGTGGACAAGTACCTGGTGCCCATCCAAACAGATCAGG ATCAGACCGATGGCCCACAGGAGGATGATAACGAGGCCGTGCCGGACGAG AGGGGCGCCATCAAGGCGATCCATCATGGTCAACGCTTCTCCCGCAAACT GAAGCGCCGCCTTACCCAAAGAACCATCGCAGAGGCTCGCGCCCTCAAAA AGCAGAGCAAGGAGGCGATCCACGTGCTCTTCTATGCCGCAGAATTGATT GCCACCGATCCCAAGCAGGCCGTTCAAAAGGCCAAGGAACTGTGGGTCTA TCTCAGTGCAGATGAACCCGAAAATCAAGCGAGGCCCGCCACTCTGGAGC AGTTGATTGTGCTACTGACCCGCGAATCGGCTAGGCGTGTGGTTCATCTA GTGAACTTCAGTGCTCATGTGGCAGCCAACATACCCAGAAACCTGGCGCA CACGACAACAGAGGTTGCCCACCATATTATCTATATCAACCACCGCATCA TCACAATCTCACGGCTGGACAAGGTTAAAACCATCTCCAAAGAGGAAGCT GAATCTCTTTTCAAGCGCATGCTGGCGTTCTATGGTAGCCTTCAGGGCCT GACCAATGCCTACCTGGAGCGCGTGGCCAGCTTTCTATCCGGACGCATGG AGGCCGAGAAGGTGACGGGCAGCGATGGCGGCAATTCCAACCACCGGTCA TCGCGGAGGAGGCAGGATCCGAACCATTATTCAGCCACCCACAATAACAT CAACGGCGTCTACTAGCATTGAATTCTTTATTGCTATCGTATTTTTATTT CTGTTTCTCCGTGCATATACGGAAAATACACTAAACGATATTGTACATCT ATTTTTAACATAATGCATTTGTCAATAATATAAGCCTAACTTCACGCTTA ACAATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lsd-1-RC | 1894 | Lsd-1-RC | 421..1826 | 1..1406 | 7030 | 100 | Plus |
Lsd-1-RB | 1576 | Lsd-1-RB | 154..1508 | 52..1406 | 6775 | 100 | Plus |
Lsd-1.b | 1903 | Lsd-1.b | 780..1835 | 351..1406 | 5280 | 100 | Plus |
Lsd-1.b | 1903 | Lsd-1.b | 409..759 | 1..351 | 1755 | 100 | Plus |
Lsd-1-RB | 1576 | Lsd-1-RB | 34..85 | 1..52 | 260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19587789..19588088 | 52..351 | 1485 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 19589772..19590075 | 1116..1405 | 1275 | 95.4 | Plus |
chr3R | 27901430 | chr3R | 19588152..19588364 | 351..563 | 1065 | 100 | Plus |
chr3R | 27901430 | chr3R | 19589274..19589465 | 747..938 | 945 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 19588910..19589095 | 562..747 | 930 | 100 | Plus |
chr3R | 27901430 | chr3R | 19589526..19589707 | 936..1117 | 910 | 100 | Plus |
chr3R | 27901430 | chr3R | 19587669..19587720 | 1..52 | 245 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23764385..23764684 | 52..351 | 1500 | 100 | Plus |
3R | 32079331 | 3R | 23766373..23766663 | 1116..1406 | 1455 | 100 | Plus |
3R | 32079331 | 3R | 23764748..23764960 | 351..563 | 1065 | 100 | Plus |
3R | 32079331 | 3R | 23765875..23766066 | 747..938 | 960 | 100 | Plus |
3R | 32079331 | 3R | 23765511..23765696 | 562..747 | 930 | 100 | Plus |
3R | 32079331 | 3R | 23766127..23766308 | 936..1117 | 910 | 100 | Plus |
3R | 32079331 | 3R | 23764265..23764316 | 1..52 | 260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23505216..23505515 | 52..351 | 1500 | 100 | Plus |
3R | 31820162 | 3R | 23507204..23507494 | 1116..1406 | 1455 | 100 | Plus |
3R | 31820162 | 3R | 23505579..23505791 | 351..563 | 1065 | 100 | Plus |
3R | 31820162 | 3R | 23506706..23506897 | 747..938 | 960 | 100 | Plus |
3R | 31820162 | 3R | 23506342..23506527 | 562..747 | 930 | 100 | Plus |
3R | 31820162 | 3R | 23506958..23507139 | 936..1117 | 910 | 100 | Plus |
3R | 31820162 | 3R | 23505096..23505147 | 1..52 | 260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19587669..19587720 | 1..52 | 98 | -> | Plus |
chr3R | 19587790..19588088 | 53..351 | 99 | -> | Plus |
chr3R | 19588153..19588363 | 352..562 | 100 | -> | Plus |
chr3R | 19588911..19589095 | 563..747 | 100 | -> | Plus |
chr3R | 19589275..19589465 | 748..938 | 99 | -> | Plus |
chr3R | 19589529..19589706 | 939..1116 | 100 | -> | Plus |
chr3R | 19589773..19589954 | 1117..1298 | 100 | -> | Plus |
chr3R | 19589969..19590075 | 1299..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lsd-1-RC | 1..1218 | 49..1266 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lsd-1-RC | 1..1218 | 49..1266 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lsd-1-RC | 1..1218 | 49..1266 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lsd-1-RC | 1..1218 | 49..1266 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lsd-1-RC | 1..1218 | 49..1266 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lsd-1-RC | 409..1813 | 1..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lsd-1-RC | 409..1813 | 1..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lsd-1-RC | 409..1813 | 1..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lsd-1-RC | 409..1813 | 1..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Lsd-1-RC | 409..1813 | 1..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23764265..23764316 | 1..52 | 100 | -> | Plus |
3R | 23764386..23764684 | 53..351 | 100 | -> | Plus |
3R | 23764749..23764959 | 352..562 | 100 | -> | Plus |
3R | 23765512..23765696 | 563..747 | 100 | -> | Plus |
3R | 23765876..23766066 | 748..938 | 100 | -> | Plus |
3R | 23766130..23766307 | 939..1116 | 100 | -> | Plus |
3R | 23766374..23766662 | 1117..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23764265..23764316 | 1..52 | 100 | -> | Plus |
3R | 23764386..23764684 | 53..351 | 100 | -> | Plus |
3R | 23764749..23764959 | 352..562 | 100 | -> | Plus |
3R | 23765512..23765696 | 563..747 | 100 | -> | Plus |
3R | 23765876..23766066 | 748..938 | 100 | -> | Plus |
3R | 23766130..23766307 | 939..1116 | 100 | -> | Plus |
3R | 23766374..23766662 | 1117..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23764265..23764316 | 1..52 | 100 | -> | Plus |
3R | 23764386..23764684 | 53..351 | 100 | -> | Plus |
3R | 23764749..23764959 | 352..562 | 100 | -> | Plus |
3R | 23765512..23765696 | 563..747 | 100 | -> | Plus |
3R | 23765876..23766066 | 748..938 | 100 | -> | Plus |
3R | 23766130..23766307 | 939..1116 | 100 | -> | Plus |
3R | 23766374..23766662 | 1117..1405 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19591852..19592029 | 939..1116 | 100 | -> | Plus |
arm_3R | 19592096..19592384 | 1117..1405 | 100 | Plus | |
arm_3R | 19589987..19590038 | 1..52 | 100 | -> | Plus |
arm_3R | 19590108..19590406 | 53..351 | 100 | -> | Plus |
arm_3R | 19590471..19590681 | 352..562 | 100 | -> | Plus |
arm_3R | 19591234..19591418 | 563..747 | 100 | -> | Plus |
arm_3R | 19591598..19591788 | 748..938 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23505096..23505147 | 1..52 | 100 | -> | Plus |
3R | 23506961..23507138 | 939..1116 | 100 | -> | Plus |
3R | 23506343..23506527 | 563..747 | 100 | -> | Plus |
3R | 23506707..23506897 | 748..938 | 100 | -> | Plus |
3R | 23505217..23505515 | 53..351 | 100 | -> | Plus |
3R | 23505580..23505790 | 352..562 | 100 | -> | Plus |
3R | 23507205..23507493 | 1117..1405 | 100 | Plus |
Translation from 1 to 1265
> GH10767.hyp NSSRISTESSREIPTQMATATSGSGLHLEAIDRIGSIPLVESSVKRVETI YDKVKNNNRLFSWYFETAEATISAAYETIQPAVKLFEPSIQRLDNVMCKS LDILEQRIPLVYLPPEMMYWNTKEYMSDHLVRPVLKRADSVKQIGNAVLE SPLTTYAAERIDGAFTVGDKFVDKYLVPIQTDQDQTDGPQEDDNEAVPDE RGAIKAIHHGQRFSRKLKRRLTQRTIAEARALKKQSKEAIHVLFYAAELI ATDPKQAVQKAKELWVYLSADEPENQARPATLEQLIVLLTRESARRVVHL VNFSAHVAANIPRNLAHTTTEVAHHIIYINHRIITISRLDKVKTISKEEA ESLFKRMLAFYGSLQGLTNAYLERVASFLSGRMEAEKVTGSDGGNSNHRS SRRRQDPNHYSATHNNINGVY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lsd-1-PD | 405 | CG10374-PD | 1..405 | 17..421 | 2059 | 100 | Plus |
Lsd-1-PC | 405 | CG10374-PC | 1..405 | 17..421 | 2059 | 100 | Plus |
Lsd-1-PA | 431 | CG10374-PA | 1..431 | 17..421 | 2016 | 93.7 | Plus |
Lsd-1-PB | 325 | CG10374-PB | 1..325 | 97..421 | 1660 | 100 | Plus |
Lsd-2-PB | 335 | CG9057-PB | 36..251 | 27..234 | 205 | 25.4 | Plus |
Translation from 48 to 1265
> GH10767.pep MATATSGSGLHLEAIDRIGSIPLVESSVKRVETIYDKVKNNNRLFSWYFE TAEATISAAYETIQPAVKLFEPSIQRLDNVMCKSLDILEQRIPLVYLPPE MMYWNTKEYMSDHLVRPVLKRADSVKQIGNAVLESPLTTYAAERIDGAFT VGDKFVDKYLVPIQTDQDQTDGPQEDDNEAVPDERGAIKAIHHGQRFSRK LKRRLTQRTIAEARALKKQSKEAIHVLFYAAELIATDPKQAVQKAKELWV YLSADEPENQARPATLEQLIVLLTRESARRVVHLVNFSAHVAANIPRNLA HTTTEVAHHIIYINHRIITISRLDKVKTISKEEAESLFKRMLAFYGSLQG LTNAYLERVASFLSGRMEAEKVTGSDGGNSNHRSSRRRQDPNHYSATHNN INGVY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16261-PA | 405 | GF16261-PA | 1..405 | 1..405 | 2010 | 91.6 | Plus |
Dana\GF21059-PA | 368 | GF21059-PA | 37..281 | 11..235 | 193 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11228-PA | 405 | GG11228-PA | 1..405 | 1..405 | 2107 | 97 | Plus |
Dere\GG19422-PA | 330 | GG19422-PA | 36..280 | 11..235 | 192 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23614-PA | 409 | GH23614-PA | 1..409 | 1..405 | 1864 | 85.8 | Plus |
Dgri\GH24314-PA | 368 | GH24314-PA | 42..261 | 11..205 | 182 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lsd-1-PD | 405 | CG10374-PD | 1..405 | 1..405 | 2059 | 100 | Plus |
Lsd-1-PC | 405 | CG10374-PC | 1..405 | 1..405 | 2059 | 100 | Plus |
Lsd-1-PA | 431 | CG10374-PA | 1..431 | 1..405 | 2016 | 93.7 | Plus |
Lsd-1-PB | 325 | CG10374-PB | 1..325 | 81..405 | 1660 | 100 | Plus |
Lsd-2-PB | 335 | CG9057-PB | 36..251 | 11..218 | 205 | 25.4 | Plus |
Lsd-2-PA | 352 | CG9057-PA | 36..268 | 11..218 | 196 | 23.9 | Plus |
Lsd-2-PF | 335 | CG9057-PF | 36..215 | 11..176 | 184 | 24.9 | Plus |
Lsd-2-PE | 335 | CG9057-PE | 36..215 | 11..176 | 184 | 24.9 | Plus |
Lsd-2-PD | 318 | CG9057-PD | 36..208 | 11..169 | 182 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10367-PA | 401 | GI10367-PA | 3..401 | 8..405 | 1773 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23261-PA | 412 | GL23261-PA | 10..412 | 5..405 | 1881 | 87.1 | Plus |
Dper\GL15208-PA | 360 | GL15208-PA | 43..287 | 11..235 | 187 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10284-PA | 408 | GA10284-PA | 1..408 | 1..405 | 1894 | 87.5 | Plus |
Dpse\GA10284-PB | 434 | GA10284-PB | 1..434 | 1..405 | 1857 | 82.3 | Plus |
Dpse\GA10284-PC | 327 | GA10284-PC | 1..327 | 81..405 | 1553 | 88.7 | Plus |
Dpse\GA21508-PA | 360 | GA21508-PA | 43..287 | 11..235 | 187 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26530-PA | 405 | GM26530-PA | 1..405 | 1..405 | 2143 | 98.3 | Plus |
Dsec\GM12009-PA | 336 | GM12009-PA | 36..280 | 11..235 | 192 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21037-PA | 404 | GD21037-PA | 1..404 | 1..405 | 2139 | 98.8 | Plus |
Dsim\GD15823-PA | 336 | GD15823-PA | 36..280 | 11..235 | 192 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22586-PA | 403 | GJ22586-PA | 2..403 | 7..405 | 1787 | 86.8 | Plus |