Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
GH10770.complete Sequence
1511 bp (1511 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051437
> GH10770.complete
CCTCCAGCAAAAACGTGTGTTTTTGTTGCGCTGCTATTTGTTTAATTTAA
TTTTTAAGTTGAAACAATTATGTCGGCGCAATATCAAAGATTCCTGAAAG
TACTAGAAAAGTGGCCAGCGGAGAAATCAAAAGTCGGCAGGGATCTCGGC
GAGCAGATTCGCAAACAGGTGACCAAGCTTACAAGTCTAGAGGGCGGAGC
GACGGATAAGGAGCTGGACCGTCAGATCAATTCTCTGGAGAGGCTATCCA
ATAACGTCTACGCAAAGAAGTATCCGCGCACTTTCGAGTCCACGGCCACT
GGACTAACCGCCGCCCAGTGCAGCCAAGTGTTGAGCTCCGAGTTCCTGCA
ATATTTGAACGAGGACTCAAAAAAAAAGAAGTAGCACGATGAAGCGACTC
CTAAACCCTACTAGACTGAGACTGGATTGGTTGAGACGAAGCTCTATAGA
TGTGACGACTGCTCCCCATGTTCCTGTGCTCTGCGACACCGCCATTGAAT
ACCTGCAGCCCGTTCCAGGAGGCACCTACTTCGACATGACTTTCGGAGCT
GGTGGCCACACGCGGCGTCTTCTGGAGAAGTGTCCCGAGGCAAAGGTATA
CGCCCTAGATCGAGATCCATTGGCCCACCAACTGGCCCGCGATATGAGCG
AATCCGAAGAGTTCAAGGGTAGGCTGATTCCCCTGCTTGGAAAATTCTCC
GATTTACCAAAGCTTTTCAAAGAACATGGCCTGGCCAAGAACTCGGTGGA
CGGGATGCTTTTTGATTTTGGTTGCAGTTCCATGCAATTCGATGAGGCGG
TCAGAGGCTTCTCCATCTCGAGGGACGGTCCACTGGACATGCGAATGGAT
GGTGGCCACAGCGGAGGGGTTACAGCTGCCGATGTGTTGGCTAATGTTGA
AGAGGGCGACCTTGTGAAGATTTTAAGGATGTATGGTGAAGAGAAAGCAG
CCAAGAAGATAGCCAGAGGACTGGTAGACGCGCGCAACGCCCTCTTTAAA
ATCGAGACCACCAAGCAGCTGGCAGATATAATTGAAAACATCATGGATGG
CGGGACCAGGAAGGATAAGCTTCGACGACCGGCACACTCAGCCACCAAGA
CCTTCCAAGCCATCCGCATATTTGTGAACAACGAACTAAACGAGATCAAC
TACGGTATGGTTTTGGCCAACGAAATCCTCCGTGTGGATGGACGCTTGGT
GACCATTACCTTCCACTCGCTGGAGGACACTATCGTGAAGCGTCACATCA
ACGGAAACGTCCTGGCAGGCGCCGCCAATGCTCTTCCCCTCAAGTACTCC
AGCCATTATGCAATAGACGAGCCAGATATACTAGAATCACTGACCAAGAA
GAGCTGGAAACAACTACATCGCCATGTCATTGTGCCAGACGCCGACGAGG
TGGCGAGGAACACACGCAGTCGATCCGCCAAGCTGAGAGCAGCCGTCAAA
ACAAACTAAACGCATGTCAATAAATTCCCTCGGTCTAGTTCAAAAAAAAA
AAAAAAAAAAA
GH10770.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:00:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14683-RA | 1511 | CG14683-RA | 21..1511 | 1..1491 | 7455 | 100 | Plus |
CG14683-RB | 1504 | CG14683-RB | 14..1504 | 1..1491 | 7455 | 100 | Plus |
pug-RD | 3142 | pug-RD | 14..153 | 1..140 | 700 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:35:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 6523168..6524520 | 139..1491 | 6765 | 100 | Plus |
chr3R | 27901430 | chr3R | 6522207..6522347 | 1..141 | 705 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:43:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:35:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10697624..10698980 | 139..1495 | 6785 | 100 | Plus |
3R | 32079331 | 3R | 10696663..10696803 | 1..141 | 705 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:18:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 10438455..10439811 | 139..1495 | 6785 | 100 | Plus |
3R | 31820162 | 3R | 10437494..10437634 | 1..141 | 705 | 100 | Plus |
Blast to na_te.dros performed 2019-03-15 19:35:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
accord2 | 7650 | accord2 QBERT 7650bp | 6452..6547 | 1..96 | 120 | 62.6 | Plus |
GH10770.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:36:27 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 6522207..6522346 | 1..140 | 100 | -> | Plus |
chr3R | 6523170..6524520 | 141..1491 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:33:55 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14683-RB | 1..1071 | 389..1459 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:59:59 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14683-RB | 1..1071 | 389..1459 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:54:46 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14683-RA | 1..1071 | 389..1459 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:43:54 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14683-RB | 1..1071 | 389..1459 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:21:15 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14683-RA | 1..1071 | 389..1459 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:15:17 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14683-RB | 14..1504 | 1..1491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:59:59 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14683-RB | 14..1504 | 1..1491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:54:46 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14683-RA | 17..1507 | 1..1491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:43:54 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14683-RB | 14..1504 | 1..1491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:21:15 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14683-RA | 17..1507 | 1..1491 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:27 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10696663..10696802 | 1..140 | 100 | -> | Plus |
3R | 10697626..10698976 | 141..1491 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:27 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10696663..10696802 | 1..140 | 100 | -> | Plus |
3R | 10697626..10698976 | 141..1491 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:27 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10696663..10696802 | 1..140 | 100 | -> | Plus |
3R | 10697626..10698976 | 141..1491 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:54:46 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6522385..6522524 | 1..140 | 100 | -> | Plus |
arm_3R | 6523348..6524698 | 141..1491 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:26:50 Download gff for
GH10770.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10438457..10439807 | 141..1491 | 100 | | Plus |
3R | 10437494..10437633 | 1..140 | 100 | -> | Plus |
GH10770.pep Sequence
Translation from 388 to 1458
> GH10770.pep
MKRLLNPTRLRLDWLRRSSIDVTTAPHVPVLCDTAIEYLQPVPGGTYFDM
TFGAGGHTRRLLEKCPEAKVYALDRDPLAHQLARDMSESEEFKGRLIPLL
GKFSDLPKLFKEHGLAKNSVDGMLFDFGCSSMQFDEAVRGFSISRDGPLD
MRMDGGHSGGVTAADVLANVEEGDLVKILRMYGEEKAAKKIARGLVDARN
ALFKIETTKQLADIIENIMDGGTRKDKLRRPAHSATKTFQAIRIFVNNEL
NEINYGMVLANEILRVDGRLVTITFHSLEDTIVKRHINGNVLAGAANALP
LKYSSHYAIDEPDILESLTKKSWKQLHRHVIVPDADEVARNTRSRSAKLR
AAVKTN*
GH10770.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:09:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF17544-PA | 361 | GF17544-PA | 2..361 | 1..356 | 1514 | 77.5 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:09:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH14890-PA | 368 | GH14890-PA | 36..366 | 24..354 | 1292 | 69.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:28:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14683-PA | 356 | CG14683-PA | 1..356 | 1..356 | 1826 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:09:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI23693-PA | 362 | GI23693-PA | 33..360 | 27..354 | 1296 | 71.7 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:09:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA30236-PA | 375 | GA30236-PA | 2..364 | 1..356 | 1484 | 76 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:09:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ23252-PA | 364 | GJ23252-PA | 8..362 | 4..354 | 1309 | 67 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:09:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK11803-PA | 368 | GK11803-PA | 24..366 | 9..354 | 1229 | 68 | Plus |
GH10770.hyp Sequence
Translation from 388 to 1458
> GH10770.hyp
MKRLLNPTRLRLDWLRRSSIDVTTAPHVPVLCDTAIEYLQPVPGGTYFDM
TFGAGGHTRRLLEKCPEAKVYALDRDPLAHQLARDMSESEEFKGRLIPLL
GKFSDLPKLFKEHGLAKNSVDGMLFDFGCSSMQFDEAVRGFSISRDGPLD
MRMDGGHSGGVTAADVLANVEEGDLVKILRMYGEEKAAKKIARGLVDARN
ALFKIETTKQLADIIENIMDGGTRKDKLRRPAHSATKTFQAIRIFVNNEL
NEINYGMVLANEILRVDGRLVTITFHSLEDTIVKRHINGNVLAGAANALP
LKYSSHYAIDEPDILESLTKKSWKQLHRHVIVPDADEVARNTRSRSAKLR
AAVKTN*
GH10770.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:58:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14683-PA | 356 | CG14683-PA | 1..356 | 1..356 | 1826 | 100 | Plus |