Clone GH10770 Report

Search the DGRC for GH10770

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:107
Well:70
Vector:pOT2
Associated Gene/TranscriptCG14683-RA
Protein status:GH10770.pep: gold
Preliminary Size:2200
Sequenced Size:1511

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4067 2001-01-01 Release 2 assignment
CG14683 2001-01-01 Release 2 assignment
CG14683 2001-07-04 Blastp of sequenced clone
CG14683 2008-04-29 Release 5.5 accounting
CG14683 2008-08-15 Release 5.9 accounting
pug 2008-08-15 Release 5.9 accounting
CG14683 2008-12-18 5.12 accounting
pug 2008-12-18 5.12 accounting

Clone Sequence Records

GH10770.complete Sequence

1511 bp (1511 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051437

> GH10770.complete
CCTCCAGCAAAAACGTGTGTTTTTGTTGCGCTGCTATTTGTTTAATTTAA
TTTTTAAGTTGAAACAATTATGTCGGCGCAATATCAAAGATTCCTGAAAG
TACTAGAAAAGTGGCCAGCGGAGAAATCAAAAGTCGGCAGGGATCTCGGC
GAGCAGATTCGCAAACAGGTGACCAAGCTTACAAGTCTAGAGGGCGGAGC
GACGGATAAGGAGCTGGACCGTCAGATCAATTCTCTGGAGAGGCTATCCA
ATAACGTCTACGCAAAGAAGTATCCGCGCACTTTCGAGTCCACGGCCACT
GGACTAACCGCCGCCCAGTGCAGCCAAGTGTTGAGCTCCGAGTTCCTGCA
ATATTTGAACGAGGACTCAAAAAAAAAGAAGTAGCACGATGAAGCGACTC
CTAAACCCTACTAGACTGAGACTGGATTGGTTGAGACGAAGCTCTATAGA
TGTGACGACTGCTCCCCATGTTCCTGTGCTCTGCGACACCGCCATTGAAT
ACCTGCAGCCCGTTCCAGGAGGCACCTACTTCGACATGACTTTCGGAGCT
GGTGGCCACACGCGGCGTCTTCTGGAGAAGTGTCCCGAGGCAAAGGTATA
CGCCCTAGATCGAGATCCATTGGCCCACCAACTGGCCCGCGATATGAGCG
AATCCGAAGAGTTCAAGGGTAGGCTGATTCCCCTGCTTGGAAAATTCTCC
GATTTACCAAAGCTTTTCAAAGAACATGGCCTGGCCAAGAACTCGGTGGA
CGGGATGCTTTTTGATTTTGGTTGCAGTTCCATGCAATTCGATGAGGCGG
TCAGAGGCTTCTCCATCTCGAGGGACGGTCCACTGGACATGCGAATGGAT
GGTGGCCACAGCGGAGGGGTTACAGCTGCCGATGTGTTGGCTAATGTTGA
AGAGGGCGACCTTGTGAAGATTTTAAGGATGTATGGTGAAGAGAAAGCAG
CCAAGAAGATAGCCAGAGGACTGGTAGACGCGCGCAACGCCCTCTTTAAA
ATCGAGACCACCAAGCAGCTGGCAGATATAATTGAAAACATCATGGATGG
CGGGACCAGGAAGGATAAGCTTCGACGACCGGCACACTCAGCCACCAAGA
CCTTCCAAGCCATCCGCATATTTGTGAACAACGAACTAAACGAGATCAAC
TACGGTATGGTTTTGGCCAACGAAATCCTCCGTGTGGATGGACGCTTGGT
GACCATTACCTTCCACTCGCTGGAGGACACTATCGTGAAGCGTCACATCA
ACGGAAACGTCCTGGCAGGCGCCGCCAATGCTCTTCCCCTCAAGTACTCC
AGCCATTATGCAATAGACGAGCCAGATATACTAGAATCACTGACCAAGAA
GAGCTGGAAACAACTACATCGCCATGTCATTGTGCCAGACGCCGACGAGG
TGGCGAGGAACACACGCAGTCGATCCGCCAAGCTGAGAGCAGCCGTCAAA
ACAAACTAAACGCATGTCAATAAATTCCCTCGGTCTAGTTCAAAAAAAAA
AAAAAAAAAAA

GH10770.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14683-RA 1511 CG14683-RA 21..1511 1..1491 7455 100 Plus
CG14683-RB 1504 CG14683-RB 14..1504 1..1491 7455 100 Plus
pug-RD 3142 pug-RD 14..153 1..140 700 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:35:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 6523168..6524520 139..1491 6765 100 Plus
chr3R 27901430 chr3R 6522207..6522347 1..141 705 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:43:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10697624..10698980 139..1495 6785 100 Plus
3R 32079331 3R 10696663..10696803 1..141 705 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:18:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 10438455..10439811 139..1495 6785 100 Plus
3R 31820162 3R 10437494..10437634 1..141 705 100 Plus
Blast to na_te.dros performed 2019-03-15 19:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
accord2 7650 accord2 QBERT 7650bp 6452..6547 1..96 120 62.6 Plus

GH10770.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:36:27 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 6522207..6522346 1..140 100 -> Plus
chr3R 6523170..6524520 141..1491 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:33:55 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
CG14683-RB 1..1071 389..1459 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:59:59 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
CG14683-RB 1..1071 389..1459 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:54:46 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
CG14683-RA 1..1071 389..1459 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:43:54 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
CG14683-RB 1..1071 389..1459 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:21:15 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
CG14683-RA 1..1071 389..1459 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:15:17 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
CG14683-RB 14..1504 1..1491 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:59:59 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
CG14683-RB 14..1504 1..1491 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:54:46 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
CG14683-RA 17..1507 1..1491 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:43:54 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
CG14683-RB 14..1504 1..1491 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:21:15 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
CG14683-RA 17..1507 1..1491 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:27 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10696663..10696802 1..140 100 -> Plus
3R 10697626..10698976 141..1491 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:27 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10696663..10696802 1..140 100 -> Plus
3R 10697626..10698976 141..1491 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:27 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10696663..10696802 1..140 100 -> Plus
3R 10697626..10698976 141..1491 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:54:46 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6522385..6522524 1..140 100 -> Plus
arm_3R 6523348..6524698 141..1491 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:26:50 Download gff for GH10770.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10438457..10439807 141..1491 100   Plus
3R 10437494..10437633 1..140 100 -> Plus

GH10770.pep Sequence

Translation from 388 to 1458

> GH10770.pep
MKRLLNPTRLRLDWLRRSSIDVTTAPHVPVLCDTAIEYLQPVPGGTYFDM
TFGAGGHTRRLLEKCPEAKVYALDRDPLAHQLARDMSESEEFKGRLIPLL
GKFSDLPKLFKEHGLAKNSVDGMLFDFGCSSMQFDEAVRGFSISRDGPLD
MRMDGGHSGGVTAADVLANVEEGDLVKILRMYGEEKAAKKIARGLVDARN
ALFKIETTKQLADIIENIMDGGTRKDKLRRPAHSATKTFQAIRIFVNNEL
NEINYGMVLANEILRVDGRLVTITFHSLEDTIVKRHINGNVLAGAANALP
LKYSSHYAIDEPDILESLTKKSWKQLHRHVIVPDADEVARNTRSRSAKLR
AAVKTN*

GH10770.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:09:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17544-PA 361 GF17544-PA 2..361 1..356 1514 77.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:09:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14890-PA 368 GH14890-PA 36..366 24..354 1292 69.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:28:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14683-PA 356 CG14683-PA 1..356 1..356 1826 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:09:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23693-PA 362 GI23693-PA 33..360 27..354 1296 71.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:09:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30236-PA 375 GA30236-PA 2..364 1..356 1484 76 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23252-PA 364 GJ23252-PA 8..362 4..354 1309 67 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:09:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11803-PA 368 GK11803-PA 24..366 9..354 1229 68 Plus

GH10770.hyp Sequence

Translation from 388 to 1458

> GH10770.hyp
MKRLLNPTRLRLDWLRRSSIDVTTAPHVPVLCDTAIEYLQPVPGGTYFDM
TFGAGGHTRRLLEKCPEAKVYALDRDPLAHQLARDMSESEEFKGRLIPLL
GKFSDLPKLFKEHGLAKNSVDGMLFDFGCSSMQFDEAVRGFSISRDGPLD
MRMDGGHSGGVTAADVLANVEEGDLVKILRMYGEEKAAKKIARGLVDARN
ALFKIETTKQLADIIENIMDGGTRKDKLRRPAHSATKTFQAIRIFVNNEL
NEINYGMVLANEILRVDGRLVTITFHSLEDTIVKRHINGNVLAGAANALP
LKYSSHYAIDEPDILESLTKKSWKQLHRHVIVPDADEVARNTRSRSAKLR
AAVKTN*

GH10770.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:58:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14683-PA 356 CG14683-PA 1..356 1..356 1826 100 Plus