Clone GH10778 Report

Search the DGRC for GH10778

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:107
Well:78
Vector:pOT2
Associated Gene/TranscriptCG43755-RD
Protein status:GH10778.pep: gold
Preliminary Size:1782
Sequenced Size:1719

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31920 2001-12-12 Blastp of sequenced clone
CG31920 2003-01-01 Sim4 clustering to Release 3
CG31920 2008-04-29 Release 5.5 accounting
CG31920 2008-08-15 Release 5.9 accounting
CG31920 2008-12-18 5.12 accounting

Clone Sequence Records

GH10778.complete Sequence

1719 bp (1719 high quality bases) assembled on 2001-12-12

GenBank Submission: AY070508

> GH10778.complete
CCTAAATTTAAAAAAAAAGCCTGTTTTATTTTGGTTCCCAGATTGAGCTT
AACCGTATTTAACCATTAAACAATATTGGACCCGAATCGGATAAACACTC
CAAGCTTGGGGAATAAGACGATACCGCAATGATGGGCACACGGGCTGCGG
AGCCCCGAGGATCCAGGAGGTCCTTGGCAGGTCAAAGCATTCAAGAGCTC
TCTGTGTGCCAGGAACCCGACCCGCTAAACACCTTTTTGGAGAAACCACT
TACCCTGTATCAGTGGATGCGGTGGCGCAACTGCAAGACCCATAAGCCGC
ACCTAGAGGAAACATACCCCAGCATTCTACCGCCTATATCCAAATGTGAC
GATGCCAAGACTCTGAAGTACGTTGAAAATGCCATGGAGGCCAACAAATG
TAAAGAATACGTCAAGGAAGACGTGCTGACCGTGTGGAACTACAGTCCCC
AAAAGGAATCCTTGGTGTGGTATGGCGTTAAATCGCAGTACCCGTCTCCA
CAGGCCGTCCTCTATGACCGCGCTTTGAAAAAGAGCCTAAAGGCGGCTAG
TCTTGCTCCAAAACCGCCGAAGAAGTCCAACATAAAGCCTAAATGGCAAC
TTCAGAAGAAGCCCCCCCAGCCTGGCGCTTTTGTTTTAAATCGAAAATGT
CTGAAGGCCAAGCTCGAAAGGATGCCAAACATAAAACGCCAACTGAAGTC
GAACAATGTCTTCTCCTGGCTTCACTGTCCTCAGCCAGCGGATCCGAGCA
ATCCTTTTGACGATAGCGCCGTCTATCCAGCGATCAGCATAGAACAGGCG
ATGGACATGGCGAAGCCGGAAAAGCCTCCCAAACATGGCCTCAGACGTAA
GCATTGGTACTGCCCCCCGAAATGCGGCGAGGCAGAGAGCAAGTGCACCG
ATTACGAGTGGGCAAAGTACAAGATGGATCCCCGGCCCGACAACGAGGCA
TTCCAACGCGAGATGGCGAACCAAAAGGCCTTTAAACAACCGGAGCCCCG
CAACTACGATGAACTGTACAAATCGCTGGTAACTTGTTTCGTTCAAGACC
CAAATGGAAAGAATGATCTCTGCGAAGCGCTGGAGAAGTGCTGCAGGGAT
CCCAAAGATCCACCTGCACAGGGTTGCAGCGAGTTCGTTCCGGATGGCGC
CGGAGGAGATGAAGTTTGTGGTTGCTGCGGTAAATGCTGCTGCTCAAGGA
AGAAGGGAGGAGAATCCTGCGAAGTAAAGCCCATTATGACAAGGACGGAT
GAATGCGATGGTAAAATCAGCGAAGAATGCTCTCTCCCATCTGGCATTGA
TTCTATTGACAAACCCCAAGAACCAGCTACCCAAGGAGCGACTAAAGAGT
AGAAATCAAGTATACGCCACGGATGCATTTTTTAAGAAGTATACGCACCT
TTGGTCGCTTAGCGTACTGTCCTGTGCGAACGTCGCGTATGGTGGCTATA
TCAAGGATATCCAGCTCGTTGTTCTGGTCGACCCAGTAGAGGAAGAAGCC
CTTGGCATCGACGCGCATTGTAACCGGTGTTCCAGTGCCCGAGTCCTGAA
ATCAGATGAAGAAACCGCATGAGAACCAAAAATGAAGCAGGCTGAAATGA
AGACGAACCCTAGTCGTTATTAATAGCGCGAATGATAATCAAAGCGCGTA
TTCTTTCGATTCGGGTCCAATAAATTGTAAACACATGATACATACAGTCG
TAAAAAAAAAAAAAAAAAA

GH10778.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:49:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG31920-RB 1730 CG31920-RB 28..1730 1..1703 8515 100 Plus
CG31920.a 1648 CG31920.a 9..1265 1..1260 6230 99.7 Plus
CG31920.a 1648 CG31920.a 1265..1648 1320..1703 1920 100 Plus
Plc21C-RF 5379 Plc21C-RF 415..562 1545..1398 740 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:31:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 328600..329751 1161..10 5700 99.7 Minus
chr2L 23010047 chr2L 325529..326069 1701..1161 2705 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:43:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:31:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 328593..329753 1161..1 5805 100 Minus
2L 23513712 2L 325520..326062 1703..1161 2715 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:15:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 328593..329753 1161..1 5805 100 Minus
2L 23513712 2L 325520..326062 1703..1161 2715 100 Minus
2L 23513712 2L 331351..331471 922..802 155 75.2 Minus
Blast to na_te.dros performed 2019-03-15 15:31:42
Subject Length Description Subject Range Query Range Score Percent Strand
Idefix 7411 Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). 3547..3622 340..415 119 61.8 Plus

GH10778.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:32:24 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 325529..326068 1162..1701 100 <- Minus
chr2L 328600..329762 1..1161 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:33:59 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
CG31920-RB 1..1224 129..1352 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:18:06 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
CG31920-RB 1..1224 129..1352 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:32:09 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
CG43755-RD 1..1224 129..1352 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:44:12 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
CG31920-RB 1..1224 129..1352 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:09:24 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
CG43755-RD 1..1224 129..1352 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:50:59 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
CG31920-RB 9..1709 1..1701 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:18:06 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
CG31920-RB 9..1709 1..1701 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:32:09 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
CG43755-RD 9..1709 1..1701 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:44:12 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
CG31920-RB 9..1709 1..1701 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:09:24 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
CG43755-RD 9..1709 1..1701 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:32:24 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
2L 325522..326061 1162..1701 100 <- Minus
2L 328593..329753 1..1161 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:32:24 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
2L 325522..326061 1162..1701 100 <- Minus
2L 328593..329753 1..1161 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:32:24 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
2L 325522..326061 1162..1701 100 <- Minus
2L 328593..329753 1..1161 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:32:09 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 325522..326061 1162..1701 100 <- Minus
arm_2L 328593..329753 1..1161 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:20:27 Download gff for GH10778.complete
Subject Subject Range Query Range Percent Splice Strand
2L 325522..326061 1162..1701 100 <- Minus
2L 328593..329753 1..1161 100   Minus

GH10778.pep Sequence

Translation from 128 to 1351

> GH10778.pep
MMGTRAAEPRGSRRSLAGQSIQELSVCQEPDPLNTFLEKPLTLYQWMRWR
NCKTHKPHLEETYPSILPPISKCDDAKTLKYVENAMEANKCKEYVKEDVL
TVWNYSPQKESLVWYGVKSQYPSPQAVLYDRALKKSLKAASLAPKPPKKS
NIKPKWQLQKKPPQPGAFVLNRKCLKAKLERMPNIKRQLKSNNVFSWLHC
PQPADPSNPFDDSAVYPAISIEQAMDMAKPEKPPKHGLRRKHWYCPPKCG
EAESKCTDYEWAKYKMDPRPDNEAFQREMANQKAFKQPEPRNYDELYKSL
VTCFVQDPNGKNDLCEALEKCCRDPKDPPAQGCSEFVPDGAGGDEVCGCC
GKCCCSRKKGGESCEVKPIMTRTDECDGKISEECSLPSGIDSIDKPQEPA
TQGATKE*

GH10778.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24860-PA 396 GF24860-PA 3..358 11..364 952 55.2 Plus
Dana\GF24838-PA 683 GF24838-PA 43..324 44..324 549 42 Plus
Dana\GF15203-PA 685 GF15203-PA 45..298 51..323 280 31.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:08:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24656-PA 402 GG24656-PA 1..392 1..397 1693 81.9 Plus
Dere\GG24655-PA 720 GG24655-PA 32..317 42..324 598 43.9 Plus
Dere\GG21641-PA 496 GG21641-PA 21..305 47..323 343 32.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:08:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11146-PA 712 GH11146-PA 113..395 41..323 557 38.5 Plus
Dgri\GH24966-PA 325 GH24966-PA 22..312 41..335 481 39.2 Plus
Dgri\GH11149-PA 320 GH11149-PA 22..312 41..335 480 39.2 Plus
Dgri\GH11147-PA 281 GH11147-PA 4..265 37..304 410 34.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG43755-PD 407 CG43755-PD 1..407 1..407 2259 100 Plus
CG43755-PB 682 CG43755-PB 1..343 2..344 1899 100 Plus
CG31921-PA 713 CG31921-PA 34..340 42..343 599 40.5 Plus
CG31797-PA 868 CG31797-PA 35..330 61..340 407 34.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:08:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17853-PA 2272 GI17853-PA 39..346 41..346 549 39.2 Plus
Dmoj\GI17854-PA 332 GI17854-PA 27..331 41..340 449 36.7 Plus
Dmoj\GI17853-PA 2272 GI17853-PA 1038..1261 41..267 330 36.5 Plus
Dmoj\GI17853-PA 2272 GI17853-PA 773..934 41..200 267 38 Plus
Dmoj\GI17853-PA 2272 GI17853-PA 1626..1986 1..386 244 25.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:08:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19274-PA 702 GL19274-PA 26..320 41..338 664 45.5 Plus
Dper\GL19273-PA 617 GL19273-PA 4..249 97..344 343 34.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16566-PA 783 GA16566-PA 26..320 41..338 653 44.9 Plus
Dpse\GA16567-PA 1040 GA16567-PA 15..320 13..322 433 34.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:08:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16675-PA 407 GM16675-PA 1..407 1..407 1995 95.1 Plus
Dsec\GM16674-PA 706 GM16674-PA 34..319 42..324 541 42.2 Plus
Dsec\GM17019-PA 514 GM17019-PA 35..310 61..323 402 36.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:08:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22964-PA 450 GD22964-PA 1..373 1..373 1842 95.4 Plus
Dsim\GD22963-PA 705 GD22963-PA 34..319 42..324 475 39.4 Plus
Dsim\GD21769-PA 546 GD21769-PA 35..361 61..345 405 33 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:08:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17348-PA 645 GJ17348-PA 17..321 33..343 598 42.4 Plus
Dvir\GJ17352-PA 330 GJ17352-PA 24..328 41..352 558 41.1 Plus
Dvir\GJ17350-PA 724 GJ17350-PA 186..486 41..348 428 36.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:08:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23886-PA 846 GK23886-PA 7..341 11..342 684 43.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16195-PA 388 GE16195-PA 1..388 1..407 1683 81.8 Plus
Dyak\GE16184-PA 753 GE16184-PA 41..326 42..324 562 43.9 Plus
Dyak\GE12661-PA 504 GE12661-PA 21..332 47..344 365 33.5 Plus

GH10778.hyp Sequence

Translation from 128 to 1351

> GH10778.hyp
MMGTRAAEPRGSRRSLAGQSIQELSVCQEPDPLNTFLEKPLTLYQWMRWR
NCKTHKPHLEETYPSILPPISKCDDAKTLKYVENAMEANKCKEYVKEDVL
TVWNYSPQKESLVWYGVKSQYPSPQAVLYDRALKKSLKAASLAPKPPKKS
NIKPKWQLQKKPPQPGAFVLNRKCLKAKLERMPNIKRQLKSNNVFSWLHC
PQPADPSNPFDDSAVYPAISIEQAMDMAKPEKPPKHGLRRKHWYCPPKCG
EAESKCTDYEWAKYKMDPRPDNEAFQREMANQKAFKQPEPRNYDELYKSL
VTCFVQDPNGKNDLCEALEKCCRDPKDPPAQGCSEFVPDGAGGDEVCGCC
GKCCCSRKKGGESCEVKPIMTRTDECDGKISEECSLPSGIDSIDKPQEPA
TQGATKE*

GH10778.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:59:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG43755-PD 407 CG43755-PD 1..407 1..407 2259 100 Plus
CG43755-PB 682 CG43755-PB 1..343 2..344 1899 100 Plus
CG31921-PA 713 CG31921-PA 34..340 42..343 599 40.5 Plus
CG31797-PA 868 CG31797-PA 35..330 61..340 407 34.3 Plus