BDGP Sequence Production Resources |
Search the DGRC for GH10780
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 107 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3544-RA |
Protein status: | GH10780.pep: gold |
Preliminary Size: | 1465 |
Sequenced Size: | 1820 |
Gene | Date | Evidence |
---|---|---|
CG3544 | 2001-01-01 | Release 2 assignment |
CG3544 | 2001-10-10 | Blastp of sequenced clone |
CG3544 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3544 | 2008-04-29 | Release 5.5 accounting |
CG3544 | 2008-08-15 | Release 5.9 accounting |
CG3544 | 2008-12-18 | 5.12 accounting |
1820 bp (1820 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060675
> GH10780.complete TAGAAGTTTTATAAAAAAAAATTTCGTTCCTTCAAAATTTTGGTTGCAGC TCCACCGATGGAATATGTGCCACCGCATCAAGCAGGACTACAGTGGCAAC AGCTACCTGGGCCTCCACTTGGGCACCCAACTCTTCCGCGCCCTGATCCT CGACTCCAAATTGAACGTTACCTATGTGGCGCAGATCCGCTATGACGTTG ATCTCCCAGAGTTCAAGACAACGAATGGAATACTATCAGATGGCGGTCCT GGCGAGTTCCTGGCCAATCCGGTAATGTGGGTAAAGGCACTGGACATGCT GATGGACTGTTTAGTGAAACAGGGAGCGGATATGCACACGGTGGTCTCTA TTGCCGGAGCTGCTCAGCAGCACGGTTGCGTCTTCTGGTCGGAGTTGGGC TTGAGGCGTCTATGCAATTTGAACGTTAACCTGCGGCTCCACGAGCAGAT CACGGAGAGCGCCTTCGAATTGACCAGAACGCCTACTTGGCGGGATAGCT CGACGGACGTGCAGGTCCGTGAAATGGAGCACACCGTCGGGGGTCCCGCT GAACTGTCGAAAATAACGGGCTCCAGAGCGTACACCAGATTCACGGGTCC CCAAATACGGAAAGTGTATACCCAGTGCCCGGAGCAGTACGAGAGAACTT CCAGGATTTCGCTGATCAGCAGCTTTTTGGCCTCTCTCCTTATCGGAGGC ATTGCCTCCATAGACTACAGCGATGGCTCGGGGATGAACCTGCTCGACAT CCGGAAAAAGAAGTGGTCTGCAGCGTGCCTAGACGCCTGTGCTCCTGACC TTGCCAGGCGTTTGATGAAGCCCATTCCCTCGTCCCGGCTGCAAGGACGC ATCGGGGACTACTACGTGAAACGCTGGAACTTCAGGCCGGACTGCATGGT GGTCGCTTCCACCGGGAGCAAAGCCTCGGAACTGGCAGGGCTACTGGTAG AGAATGACTTTCTCATGCTCAGTCTGGATACAAGTGATGTGGTAGTGATG CCTCTAAAGAAAGCTCCGCGGCTGGAGGACGGCCACGTGATGTGCCATCC GACAAGAAGGGACGAATACATGGGCCTCCTATGCTTCCAAAACGGAGGAT TGACGCGAAAAGCCATCTGTGAGGATGTCGCCGGCGGCAGTTGGAGGCAC TTCTACGAAATGCTAGACGCCACGCCATCGGGCAACAATGGCAATGTAGC TGTGCACTTCCGGGACCGGGAGATTATACCCACTGCCAAGGGCACTCTGC GCTGGGATGCGCACATAAGCCCGATGTCGGCGGAGTGCATACGTGGCCTA CACCGCTTCTCCACACCGGAGATTGAGGTTCGGGCTCTAATCGAGGGTCA GATCATGCACCACTGGTCCATTGCCCACGAGATGGGCTTCCACCACACAC CGAACACAAAGATAATTGTGGTGGGTGAGGACTCCAGGTGTCAAAGTGTC CTGCAGATCGTGGCGGACATATTCAATGCTCCTGTTTACCAGCGAACCGG TGTCGAGGTCAGCCTTTTAGGATGCGCCTTTCGTGCCAGGTACGCCTTCT ACGAACACCGAGAGTCCGCCTGCAATTGCCATTCCTGCATGATGCCCACG GGCCGTAGGACGAGACTCAGCTTCGACGAGTTTTTCAGGGACGTGCCTTC CGGCTTGAAACTGGCTGCGGAACCAACACCTGGCTGCGATAAGATCTACA AGCCCCTGATCGAACGATGCTCCCAAATTTGCCAGCTGCTGGCCTCCAAA TCTAGTGTGTACTTTTTCCACCCAAATGTATAAACTTCAATAAGATAGTT TCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 784225..786026 | 1..1802 | 8950 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 784357..786158 | 1..1802 | 9010 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 784357..786158 | 1..1802 | 9010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 784225..786026 | 1..1802 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3544-RA | 1..1719 | 65..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3544-RA | 1..1719 | 65..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3544-RA | 1..1719 | 65..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3544-RA | 1..1719 | 65..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3544-RA | 1..1719 | 65..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3544-RA | 22..1823 | 1..1802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3544-RA | 22..1823 | 1..1802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3544-RA | 22..1823 | 1..1802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3544-RA | 22..1823 | 1..1802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3544-RA | 22..1823 | 1..1802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 784357..786158 | 1..1802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 784357..786158 | 1..1802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 784357..786158 | 1..1802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 784357..786158 | 1..1802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 784357..786158 | 1..1802 | 100 | Plus |
Translation from 1 to 1782
> GH10780.hyp RSFIKKNFVPSKFWLQLHRWNMCHRIKQDYSGNSYLGLHLGTQLFRALIL DSKLNVTYVAQIRYDVDLPEFKTTNGILSDGGPGEFLANPVMWVKALDML MDCLVKQGADMHTVVSIAGAAQQHGCVFWSELGLRRLCNLNVNLRLHEQI TESAFELTRTPTWRDSSTDVQVREMEHTVGGPAELSKITGSRAYTRFTGP QIRKVYTQCPEQYERTSRISLISSFLASLLIGGIASIDYSDGSGMNLLDI RKKKWSAACLDACAPDLARRLMKPIPSSRLQGRIGDYYVKRWNFRPDCMV VASTGSKASELAGLLVENDFLMLSLDTSDVVVMPLKKAPRLEDGHVMCHP TRRDEYMGLLCFQNGGLTRKAICEDVAGGSWRHFYEMLDATPSGNNGNVA VHFRDREIIPTAKGTLRWDAHISPMSAECIRGLHRFSTPEIEVRALIEGQ IMHHWSIAHEMGFHHTPNTKIIVVGEDSRCQSVLQIVADIFNAPVYQRTG VEVSLLGCAFRARYAFYEHRESACNCHSCMMPTGRRTRLSFDEFFRDVPS GLKLAAEPTPGCDKIYKPLIERCSQICQLLASKSSVYFFHPNV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3544-PB | 572 | CG3544-PB | 1..572 | 22..593 | 3039 | 100 | Plus |
CG3544-PA | 572 | CG3544-PA | 1..572 | 22..593 | 3039 | 100 | Plus |
CG3534-PA | 552 | CG3534-PA | 10..552 | 34..585 | 1335 | 45.7 | Plus |
Translation from 64 to 1782
> GH10780.pep MCHRIKQDYSGNSYLGLHLGTQLFRALILDSKLNVTYVAQIRYDVDLPEF KTTNGILSDGGPGEFLANPVMWVKALDMLMDCLVKQGADMHTVVSIAGAA QQHGCVFWSELGLRRLCNLNVNLRLHEQITESAFELTRTPTWRDSSTDVQ VREMEHTVGGPAELSKITGSRAYTRFTGPQIRKVYTQCPEQYERTSRISL ISSFLASLLIGGIASIDYSDGSGMNLLDIRKKKWSAACLDACAPDLARRL MKPIPSSRLQGRIGDYYVKRWNFRPDCMVVASTGSKASELAGLLVENDFL MLSLDTSDVVVMPLKKAPRLEDGHVMCHPTRRDEYMGLLCFQNGGLTRKA ICEDVAGGSWRHFYEMLDATPSGNNGNVAVHFRDREIIPTAKGTLRWDAH ISPMSAECIRGLHRFSTPEIEVRALIEGQIMHHWSIAHEMGFHHTPNTKI IVVGEDSRCQSVLQIVADIFNAPVYQRTGVEVSLLGCAFRARYAFYEHRE SACNCHSCMMPTGRRTRLSFDEFFRDVPSGLKLAAEPTPGCDKIYKPLIE RCSQICQLLASKSSVYFFHPNV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15035-PA | 569 | GF15035-PA | 1..563 | 1..565 | 2027 | 67.1 | Plus |
Dana\GF17074-PA | 549 | GF17074-PA | 9..543 | 13..565 | 1349 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24744-PA | 571 | GG24744-PA | 1..571 | 1..571 | 2913 | 93 | Plus |
Dere\GG21873-PA | 552 | GG21873-PA | 10..552 | 13..564 | 1398 | 46.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11241-PA | 568 | GH11241-PA | 1..563 | 1..564 | 1543 | 50.4 | Plus |
Dgri\GH19552-PA | 550 | GH19552-PA | 12..550 | 14..562 | 1431 | 50.3 | Plus |
Dgri\GH25221-PA | 458 | GH25221-PA | 1..455 | 24..478 | 1355 | 54.1 | Plus |
Dgri\GH23245-PA | 479 | GH23245-PA | 1..315 | 1..316 | 880 | 51.6 | Plus |
Dgri\GH23245-PA | 479 | GH23245-PA | 337..476 | 425..564 | 388 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3544-PB | 572 | CG3544-PB | 1..572 | 1..572 | 3039 | 100 | Plus |
CG3544-PA | 572 | CG3544-PA | 1..572 | 1..572 | 3039 | 100 | Plus |
CG3534-PA | 552 | CG3534-PA | 10..552 | 13..564 | 1335 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21838-PA | 580 | GI21838-PA | 1..565 | 1..565 | 1473 | 51.5 | Plus |
Dmoj\GI23848-PA | 553 | GI23848-PA | 11..550 | 13..562 | 1405 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15293-PA | 574 | GL15293-PA | 1..570 | 1..569 | 1778 | 58.2 | Plus |
Dper\GL24542-PA | 550 | GL24542-PA | 9..547 | 13..561 | 1424 | 48.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17513-PA | 574 | GA17513-PA | 1..570 | 1..569 | 1822 | 59.4 | Plus |
Dpse\GA17507-PA | 550 | GA17507-PA | 9..547 | 13..561 | 1425 | 48.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16766-PA | 572 | GM16766-PA | 1..572 | 1..572 | 3038 | 97.7 | Plus |
Dsec\GM15194-PA | 552 | GM15194-PA | 10..552 | 13..564 | 1372 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23045-PA | 572 | GD23045-PA | 1..572 | 1..572 | 3038 | 97.7 | Plus |
Dsim\GD19126-PA | 405 | GD19126-PA | 10..394 | 13..397 | 1084 | 50.6 | Plus |
Dsim\GD15162-PA | 184 | GD15162-PA | 7..184 | 378..564 | 307 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17792-PA | 580 | GJ17792-PA | 1..564 | 1..565 | 1650 | 54.2 | Plus |
Dvir\GJ10562-PA | 553 | GJ10562-PA | 5..550 | 6..562 | 1396 | 48.2 | Plus |