BDGP Sequence Production Resources |
Search the DGRC for GH10882
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 108 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17564-RB |
Protein status: | GH10882.pep: gold |
Preliminary Size: | 1780 |
Sequenced Size: | 1243 |
Gene | Date | Evidence |
---|---|---|
CG17564 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17564 | 2008-04-29 | Stopped prior to 5.5 |
CG17564 | 2008-12-18 | 5.12 accounting |
1243 bp assembled on 2008-11-19
GenBank Submission: BT053699.1
> GH10882.complete CACACACAACTACTACTACAAAACGCACAATCCGCGCTGTATCGCGGTAA CCAAAGCAAAAAAAAAAATATAAAAAACTAACAAAAACGTACACTTGAGC TTTTACTTTCGGCAAAGAGATCCAAGATGCCCCGCGTGAAGCCCACCAAG AAGCTCGATGTTCTGGGAAATCTGGACCTGCGGCCGGAGGATGCCGTGGG GGACTATATCAGCTCTAAGCAGCAGAACAAATTCTTCGTAATTCCACCGA ACTCGGACTCTGCCGGCGACTCCATCGAACTGATATATGTGAACAATCTC CGCGAGCACGAAGCCATGCTCAAGCTGCAGGAGGAGATGCTGACCAGTGC CAAGCGGCAGACCAAGCTGAACTCCGCCCGGGTGAGGAACATGTACAAGA TCCAGGAGCGGCTGAGGCGGCGCTTCATCGAGGTGAACAGCTTCATCAAG GACTGCGCGGACAAAAAGAGAGTGGCCGAGAAGACCGCCCAAGCGGAGAC GCTCAACCATAAGGAGCTCGGCGAGGGCATTGAGAGCTTCAAGGACTCGA TCGGCGAACTCAAGGCCTTTCGGGAGGCTCTCAAGGCCACCGTGCAGGAG TTCCAGCCCTACGAGAAGGTGCTCGACGAGGTGGTGAAGGTATCCGACAT ATTCGTCTCGCCAAAGGACTGCACCGATCGCTGTGATGCGCTGATGCTGG CTCAAGTGGAGATCAACAAGTTGGAGCATCAAAAGCTCCAGGACATCGAG AACATGCGGCAGCGTATGGTGCAGATCACAAATGATGCGGCTCTAACTGT GCTGGGTCTAAAGAACGATCTGGCCAAACTGGAACGATCCTACAACGAGT CCAGAGTGCAGTGCCTCAGATGGGAGAAGATCCTGGCCAAGACCAAGGAC GCCATCAACAACAACTACATGGACAAGGAGCGCACAATAGATGCGATTAC CAACCTTCACCGAATCCTTCTACGGCGAAGAGATGTACATTCGTTTCCCG CTCGCGGCGACTTGGACAAGGTGTTGGATGCCATCATGGGCGAAGTGGAA ATATTAACTGGCGTTGTAAAGGAAATCGAATCATCTGATCCCTCGATAAA GCACGAGGAAGCCAGAGATAAGTCGCTGTGCTAATTGGATATCAAAATTC AAAGAGTTCATAGGGAAGACTAGGCACACCTCACAGCTATTACAACTATA AAAGCTTATTAAAAGCGAAACTTTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17564-RB | 1315 | CG17564-RB | 83..1309 | 1..1229 | 6090 | 99.8 | Plus |
CG17564.a | 822 | CG17564.a | 331..816 | 744..1229 | 2430 | 100 | Plus |
CG17564.a | 822 | CG17564.a | 1..337 | 96..432 | 1685 | 100 | Plus |
CG10750-RA | 1194 | CG10750-RA | 530..817 | 538..825 | 360 | 75 | Plus |
CG10750-RA | 1194 | CG10750-RA | 383..460 | 391..468 | 195 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 19297581..19298035 | 694..240 | 2260 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 19297235..19297522 | 982..695 | 1380 | 98.6 | Minus |
chr2L | 23010047 | chr2L | 19298208..19298444 | 239..1 | 1130 | 99.2 | Minus |
chr2L | 23010047 | chr2L | 19296942..19297181 | 1225..981 | 1100 | 97.6 | Minus |
chr2L | 23010047 | chr2L | 19299292..19299587 | 391..686 | 220 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19298988..19299442 | 694..240 | 2275 | 100 | Minus |
2L | 23513712 | 2L | 19298642..19298929 | 982..695 | 1440 | 100 | Minus |
2L | 23513712 | 2L | 19298341..19298589 | 1229..981 | 1245 | 100 | Minus |
2L | 23513712 | 2L | 19299615..19299851 | 239..1 | 1130 | 99.2 | Minus |
2L | 23513712 | 2L | 19300699..19300994 | 391..686 | 220 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19298988..19299442 | 694..240 | 2275 | 100 | Minus |
2L | 23513712 | 2L | 19298642..19298929 | 982..695 | 1440 | 100 | Minus |
2L | 23513712 | 2L | 19298341..19298589 | 1229..981 | 1245 | 100 | Minus |
2L | 23513712 | 2L | 19299615..19299851 | 239..1 | 1140 | 99.1 | Minus |
2L | 23513712 | 2L | 19300699..19300776 | 391..468 | 195 | 83.3 | Plus |
2L | 23513712 | 2L | 19300846..19300994 | 538..686 | 190 | 75.1 | Plus |
2L | 23513712 | 2L | 19301061..19301188 | 698..825 | 175 | 75.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 19296942..19297179 | 983..1225 | 97 | <- | Minus |
chr2L | 19297235..19297522 | 695..982 | 98 | <- | Minus |
chr2L | 19297581..19298035 | 240..694 | 99 | <- | Minus |
chr2L | 19298208..19298444 | 1..239 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17564-RB | 1..1008 | 127..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17564-RB | 1..1008 | 127..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17564-RB | 1..1008 | 127..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17564-RB | 1..1008 | 127..1134 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17564-RB | 1..1223 | 1..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17564-RB | 1..1223 | 1..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17564-RB | 83..1305 | 1..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17564-RB | 83..1305 | 1..1225 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19298642..19298929 | 695..982 | 100 | <- | Minus |
2L | 19298345..19298587 | 983..1225 | 100 | <- | Minus |
2L | 19298988..19299442 | 240..694 | 100 | <- | Minus |
2L | 19299615..19299851 | 1..239 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19298642..19298929 | 695..982 | 100 | <- | Minus |
2L | 19298345..19298587 | 983..1225 | 100 | <- | Minus |
2L | 19298988..19299442 | 240..694 | 100 | <- | Minus |
2L | 19299615..19299851 | 1..239 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19298642..19298929 | 695..982 | 100 | <- | Minus |
2L | 19298345..19298587 | 983..1225 | 100 | <- | Minus |
2L | 19298988..19299442 | 240..694 | 100 | <- | Minus |
2L | 19299615..19299851 | 1..239 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 19298345..19298587 | 983..1225 | 100 | <- | Minus |
arm_2L | 19298642..19298929 | 695..982 | 100 | <- | Minus |
arm_2L | 19298988..19299442 | 240..694 | 100 | <- | Minus |
arm_2L | 19299615..19299851 | 1..239 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19298345..19298587 | 983..1225 | 100 | <- | Minus |
2L | 19298642..19298929 | 695..982 | 100 | <- | Minus |
2L | 19298988..19299442 | 240..694 | 100 | <- | Minus |
2L | 19299615..19299851 | 1..239 | 99 | Minus |
Translation from 126 to 1133
> GH10882.pep MPRVKPTKKLDVLGNLDLRPEDAVGDYISSKQQNKFFVIPPNSDSAGDSI ELIYVNNLREHEAMLKLQEEMLTSAKRQTKLNSARVRNMYKIQERLRRRF IEVNSFIKDCADKKRVAEKTAQAETLNHKELGEGIESFKDSIGELKAFRE ALKATVQEFQPYEKVLDEVVKVSDIFVSPKDCTDRCDALMLAQVEINKLE HQKLQDIENMRQRMVQITNDAALTVLGLKNDLAKLERSYNESRVQCLRWE KILAKTKDAINNNYMDKERTIDAITNLHRILLRRRDVHSFPARGDLDKVL DAIMGEVEILTGVVKEIESSDPSIKHEEARDKSLC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15201-PA | 332 | GF15201-PA | 1..326 | 1..326 | 1312 | 74.2 | Plus |
Dana\GF15202-PA | 335 | GF15202-PA | 1..335 | 1..335 | 1243 | 70.1 | Plus |
Dana\GF14711-PA | 331 | GF14711-PA | 1..320 | 1..320 | 1017 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21640-PA | 335 | GG21640-PA | 1..335 | 1..335 | 1688 | 94.9 | Plus |
Dere\GG21168-PA | 331 | GG21168-PA | 1..320 | 1..320 | 1049 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13474-PA | 333 | GH13474-PA | 1..289 | 1..289 | 1062 | 67.8 | Plus |
Dgri\GH13442-PA | 337 | GH13442-PA | 1..336 | 1..335 | 1024 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17564-PB | 335 | CG17564-PB | 1..335 | 1..335 | 1691 | 100 | Plus |
CG10750-PA | 331 | CG10750-PA | 1..320 | 1..320 | 993 | 60.9 | Plus |
CG10750-PB | 331 | CG10750-PB | 1..320 | 1..320 | 986 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17227-PA | 328 | GI17227-PA | 1..323 | 1..323 | 1172 | 67.8 | Plus |
Dmoj\GI14005-PA | 336 | GI14005-PA | 1..335 | 1..335 | 1038 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21116-PA | 334 | GL21116-PA | 1..326 | 1..326 | 1277 | 73.9 | Plus |
Dper\GL21195-PA | 329 | GL21195-PA | 1..320 | 1..320 | 998 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14557-PA | 334 | GA14557-PA | 1..334 | 1..335 | 1264 | 71.9 | Plus |
Dpse\GA10542-PA | 329 | GA10542-PA | 1..325 | 1..325 | 999 | 58.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17018-PA | 335 | GM17018-PA | 1..335 | 1..335 | 1749 | 98.8 | Plus |
Dsec\GM17333-PA | 331 | GM17333-PA | 1..320 | 1..320 | 1042 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21768-PA | 335 | GD21768-PA | 1..335 | 1..335 | 1755 | 99.1 | Plus |
Dsim\GD24193-PA | 297 | GD24193-PA | 1..286 | 1..320 | 860 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17986-PA | 333 | GJ17986-PA | 1..323 | 1..323 | 1112 | 64.7 | Plus |
Dvir\GJ18249-PA | 336 | GJ18249-PA | 1..335 | 1..335 | 1040 | 59.4 | Plus |
Translation from 126 to 1133
> GH10882.hyp MPRVKPTKKLDVLGNLDLRPEDAVGDYISSKQQNKFFVIPPNSDSAGDSI ELIYVNNLREHEAMLKLQEEMLTSAKRQTKLNSARVRNMYKIQERLRRRF IEVNSFIKDCADKKRVAEKTAQAETLNHKELGEGIESFKDSIGELKAFRE ALKATVQEFQPYEKVLDEVVKVSDIFVSPKDCTDRCDALMLAQVEINKLE HQKLQDIENMRQRMVQITNDAALTVLGLKNDLAKLERSYNESRVQCLRWE KILAKTKDAINNNYMDKERTIDAITNLHRILLRRRDVHSFPARGDLDKVL DAIMGEVEILTGVVKEIESSDPSIKHEEARDKSLC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17564-PB | 335 | CG17564-PB | 1..335 | 1..335 | 1691 | 100 | Plus |
CG10750-PA | 331 | CG10750-PA | 1..320 | 1..320 | 993 | 60.9 | Plus |
CG10750-PB | 331 | CG10750-PB | 1..320 | 1..320 | 986 | 60.6 | Plus |