![]() | BDGP Sequence Production Resources |
Search the DGRC for GH11003
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 110 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17450-RA |
Protein status: | GH11003.pep: gold |
Sequenced Size: | 1839 |
Gene | Date | Evidence |
---|---|---|
CG17450 | 2008-04-23 | Manual selection by Ken Wan |
CG17450 | 2008-04-29 | Picked prior to 5.5 |
CG17450 | 2008-04-29 | Picked prior to 5.5 |
1839 bp assembled on 2009-03-09
GenBank Submission: BT072818.1
> GH11003.complete CTCTGTGCTTTTTGAAATCATTTGTTTGTTCCCAACACCCAGTCCAAATT CCAAGTGGCACAAATTATTAGTACTTCACTATCCCAACGATTCGACTTAT AACCGATACCAATACCGAAACCTCCGACCACGATGAGTCACAATGGGGCT GGTTTGGGAGCCGGATCCGGCGGATCGCCCATCCCGCCAACCACGGTCAT GTATTCCCAATTGCAGCCATGGAGCCAGGCGGGCGCTCCGCCCTGCATGG AGCCCGTCATGGGGCCTTCGATCCCGCCGAGAGTTGGCGCCGCCTACGAG ACGCCCACGAAGCACCCGTGGCGCCCTGCTATGGCCTATGAGCTAATCCA GGTGAAGCATATGCCCGAGCAGCCGGTGACCAACCAGCTGACCAAGCAGT GCTTCCTGCCCAAGGGCATGAAGACGGACGGCATGATATTCCCCAACTTG GTCACCGGGTTCGATCGCAATCCACAGCACGCCGCCCGGGCTGCCCTCTA CACGCGGTACACCAGCAACGAGTGGTACAACAACAACATGACCAAGTACT CCGAGTCGAACATGAATCGCAACCTCTCGGAGCGCATGCGGAATGACGCA GTGCGTCTGATGCGGGAGACGGACGAGAAGGCCACCTCGGGCCAGAGGGA CGCCGGCCGAAGGCTGGGCGAGCGCATCACCGACCTGACCTTCTGGCGCA ACGAGCTGAACGCGGAGCTGGAGAAGCTGATCGCCGAGATGTCGGACATC AACGAGCTGCAGCGGCAGTGCGGCAAGGCACTTCTCGACCTGGAGATACC ACTGCACATCGCCCAGGAGTGCCTCTTTCACCGAGAGTCGCGCCAGGGCA CGGAGAAGGTGCATGACATCGTGGAGAAGGCCCTCCTCGTTGAGATCAAC AACTTGAGGAACTCCCGTGACCGGCTAGGCGGCCTGCACGAGAAGATCTC GAAGCAGGCCCTCGACTGCCGCGGCGCCCAGCATCTCCTCGAGGACGATG TGTCGCACAAGGAGTCCTCGCTCGGCATCGACTCCATGTGCCACCAGCTG AACAACCACAGCCGCGGCATCACCTACTACGGCGGCATCGAGAAGTTCGA TCCCTCGGTCAGCACCCAGGAGTCCTGGGCGCAGGCCAGCAGCGAGCACG TCCGCCGTTCCCAGGCGGAGCGCGCGAAGCTTTCCCAGCTGCGGAGCGAT GCCCAGAGTGTGGTCAACTCGGTGGCCACCACCGTGTGGGACTTCTGGAG CAACACGAACAACGCCTTCGATCGCCGCTCGCAGGAGATGGCCGAGGCGA AGAACCGGGTGCAGCTGCACCTTCAGAAGGTCCAACAGGAGCTGTTCGAC ATGGAGAAGCATCTCTTCCTCCTGCAGAAGGCCATCCAGGACAAGTCCGG GCCGTTGAAAGTGGCCCAGACGCGGCTGGAGGCCCGCTCCCACCGCGAGG GCGTCGAGCTGTGCAAGGACCACGCCCAGGACCGCCTTGTCCAGGAGGTG CAGGACATCCAGGGTGCAGTGGAGACGCTGCACCACAAGCTGATGGAGGC GGAGGCCACCCATCAGGGCCTACTAAAGACGCGCTGCACCCTGGAGGTGG ATCTGCGCAACAAAGTCAATGCCCTGTTCATCGACCGAGAGAAGTGCATG AGTCTCCGGCGCTCCTTCCCGGTCAGCAATCTGATCAAGTACTGATCCGT ATCCGTAACTGCACGCCGGTCTCTGGACTCCGCACTCCCACTCGCTTTTT CCGCCACCAGTTTTCCTGACATGTCATTTGTGTGTGTACCATCAAGAGAT AAACTGCAGATTGCATTTGTTGAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 21471126..21471791 | 1822..1157 | 3330 | 100 | Minus |
chrX | 22417052 | chrX | 21477256..21477886 | 1787..1157 | 3050 | 98.9 | Minus |
chrX | 22417052 | chrX | 21483348..21483978 | 1787..1157 | 3050 | 98.9 | Minus |
chrX | 22417052 | chrX | 21471954..21472542 | 1157..569 | 2945 | 100 | Minus |
chrX | 22417052 | chrX | 21478046..21478634 | 1157..569 | 2945 | 100 | Minus |
chrX | 22417052 | chrX | 21484138..21484726 | 1157..569 | 2945 | 100 | Minus |
chrX | 22417052 | chrX | 21472665..21473233 | 569..1 | 2845 | 100 | Minus |
chrX | 22417052 | chrX | 21478757..21479325 | 569..1 | 2845 | 100 | Minus |
chrX | 22417052 | chrX | 21484849..21485417 | 569..1 | 2845 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 21605964..21606633 | 1826..1157 | 3350 | 100 | Minus |
X | 23542271 | X | 21612098..21612728 | 1787..1157 | 3050 | 98.9 | Minus |
X | 23542271 | X | 21618190..21618820 | 1787..1157 | 3050 | 98.9 | Minus |
X | 23542271 | X | 21606796..21607384 | 1157..569 | 2945 | 100 | Minus |
X | 23542271 | X | 21612888..21613476 | 1157..569 | 2945 | 100 | Minus |
X | 23542271 | X | 21618980..21619568 | 1157..569 | 2945 | 100 | Minus |
X | 23542271 | X | 21607507..21608075 | 569..1 | 2845 | 100 | Minus |
X | 23542271 | X | 21613599..21614167 | 569..1 | 2845 | 100 | Minus |
X | 23542271 | X | 21619691..21620259 | 569..1 | 2845 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 21591056..21591725 | 1826..1157 | 3350 | 100 | Minus |
X | 23527363 | X | 21603282..21603912 | 1787..1157 | 3050 | 98.8 | Minus |
X | 23527363 | X | 21597190..21597820 | 1787..1157 | 3050 | 98.8 | Minus |
X | 23527363 | X | 21604072..21604660 | 1157..569 | 2945 | 100 | Minus |
X | 23527363 | X | 21597980..21598568 | 1157..569 | 2945 | 100 | Minus |
X | 23527363 | X | 21591888..21592476 | 1157..569 | 2945 | 100 | Minus |
X | 23527363 | X | 21604783..21605351 | 569..1 | 2845 | 100 | Minus |
X | 23527363 | X | 21598691..21599259 | 569..1 | 2845 | 100 | Minus |
X | 23527363 | X | 21592599..21593167 | 569..1 | 2845 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 21471126..21471790 | 1158..1822 | 100 | <- | Minus |
chrX | 21471954..21472541 | 570..1157 | 100 | <- | Minus |
chrX | 21472665..21473233 | 1..569 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17450-RA | 1..1563 | 133..1695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17450-RA | 1..1563 | 133..1695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17450-RA | 1..1563 | 133..1695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17450-RA | 1..1563 | 133..1695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32819-RB | 13..1799 | 1..1787 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32819-RB | 13..1799 | 1..1787 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17450-RA | 17..1838 | 1..1822 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17450-RA | 17..1838 | 1..1822 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21605968..21606632 | 1158..1822 | 100 | <- | Minus |
X | 21606796..21607383 | 570..1157 | 100 | <- | Minus |
X | 21607507..21608075 | 1..569 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21605968..21606632 | 1158..1822 | 100 | <- | Minus |
X | 21606796..21607383 | 570..1157 | 100 | <- | Minus |
X | 21607507..21608075 | 1..569 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21605968..21606632 | 1158..1822 | 100 | <- | Minus |
X | 21606796..21607383 | 570..1157 | 100 | <- | Minus |
X | 21607507..21608075 | 1..569 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 21476995..21477659 | 1158..1822 | 100 | <- | Minus |
arm_X | 21477823..21478410 | 570..1157 | 100 | <- | Minus |
arm_X | 21478534..21479102 | 1..569 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21591060..21591724 | 1158..1822 | 100 | <- | Minus |
X | 21591888..21592475 | 570..1157 | 100 | <- | Minus |
X | 21592599..21593167 | 1..569 | 100 | Minus |
Translation from 132 to 1694
> GH11003.pep MSHNGAGLGAGSGGSPIPPTTVMYSQLQPWSQAGAPPCMEPVMGPSIPPR VGAAYETPTKHPWRPAMAYELIQVKHMPEQPVTNQLTKQCFLPKGMKTDG MIFPNLVTGFDRNPQHAARAALYTRYTSNEWYNNNMTKYSESNMNRNLSE RMRNDAVRLMRETDEKATSGQRDAGRRLGERITDLTFWRNELNAELEKLI AEMSDINELQRQCGKALLDLEIPLHIAQECLFHRESRQGTEKVHDIVEKA LLVEINNLRNSRDRLGGLHEKISKQALDCRGAQHLLEDDVSHKESSLGID SMCHQLNNHSRGITYYGGIEKFDPSVSTQESWAQASSEHVRRSQAERAKL SQLRSDAQSVVNSVATTVWDFWSNTNNAFDRRSQEMAEAKNRVQLHLQKV QQELFDMEKHLFLLQKAIQDKSGPLKVAQTRLEARSHREGVELCKDHAQD RLVQEVQDIQGAVETLHHKLMEAEATHQGLLKTRCTLEVDLRNKVNALFI DREKCMSLRRSFPVSNLIKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20933-PA | 604 | GF20933-PA | 113..604 | 29..520 | 2590 | 96.3 | Plus |
Dana\GF14924-PA | 583 | GF14924-PA | 184..578 | 124..518 | 426 | 30.4 | Plus |
Dana\GF10443-PA | 421 | GF10443-PA | 1..417 | 102..513 | 320 | 25.7 | Plus |
Dana\GF13562-PA | 433 | GF13562-PA | 22..391 | 139..501 | 215 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17527-PA | 601 | GG17527-PA | 110..601 | 29..520 | 2651 | 99.4 | Plus |
Dere\GG17913-PA | 585 | GG17913-PA | 185..579 | 124..518 | 416 | 29.4 | Plus |
Dere\GG25176-PA | 585 | GG25176-PA | 185..579 | 124..518 | 415 | 29.4 | Plus |
Dere\GG14110-PA | 421 | GG14110-PA | 1..417 | 102..513 | 320 | 25.7 | Plus |
Dere\GG22824-PA | 432 | GG22824-PA | 22..391 | 139..501 | 222 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24869-PA | 595 | GH24869-PA | 104..595 | 29..520 | 2273 | 82.1 | Plus |
Dgri\GH10383-PA | 585 | GH10383-PA | 185..579 | 124..518 | 401 | 28.6 | Plus |
Dgri\GH22217-PA | 421 | GH22217-PA | 1..421 | 102..517 | 329 | 25.6 | Plus |
Dgri\GH17037-PA | 421 | GH17037-PA | 1..421 | 102..517 | 329 | 25.6 | Plus |
Dgri\GH22718-PA | 433 | GH22718-PA | 29..391 | 146..501 | 227 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32820-PB | 520 | CG32820-PB | 1..520 | 1..520 | 2722 | 100 | Plus |
CG17450-PC | 520 | CG17450-PC | 1..520 | 1..520 | 2722 | 100 | Plus |
CG17450-PA | 520 | CG17450-PA | 1..520 | 1..520 | 2722 | 100 | Plus |
CG32819-PB | 520 | CG32819-PB | 1..520 | 1..520 | 2722 | 100 | Plus |
CG32820-PA | 601 | CG32820-PA | 110..601 | 29..520 | 2574 | 100 | Plus |
CG17450-PB | 601 | CG17450-PB | 110..601 | 29..520 | 2574 | 100 | Plus |
CG32819-PA | 601 | CG32819-PA | 110..601 | 29..520 | 2574 | 100 | Plus |
Tektin-A-PB | 585 | CG4767-PB | 185..579 | 124..518 | 433 | 29.4 | Plus |
Tektin-A-PA | 585 | CG4767-PA | 185..579 | 124..518 | 433 | 29.4 | Plus |
Tektin-C-PD | 421 | CG10541-PD | 29..415 | 125..511 | 375 | 26.2 | Plus |
Tektin-C-PC | 421 | CG10541-PC | 29..415 | 125..511 | 375 | 26.2 | Plus |
Tektin-C-PA | 421 | CG10541-PA | 29..415 | 125..511 | 375 | 26.2 | Plus |
CG3085-PB | 432 | CG3085-PB | 22..391 | 139..501 | 282 | 23.9 | Plus |
CG3085-PA | 432 | CG3085-PA | 22..391 | 139..501 | 282 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14700-PA | 596 | GI14700-PA | 105..596 | 29..520 | 2272 | 82.5 | Plus |
Dmoj\GI17364-PA | 586 | GI17364-PA | 186..580 | 124..518 | 420 | 29.1 | Plus |
Dmoj\GI12041-PA | 421 | GI12041-PA | 1..421 | 102..517 | 331 | 25.6 | Plus |
Dmoj\GI18504-PA | 433 | GI18504-PA | 42..391 | 152..501 | 241 | 25.4 | Plus |
Dmoj\GI18503-PA | 433 | GI18503-PA | 63..401 | 173..512 | 179 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13433-PA | 252 | GL13433-PA | 1..250 | 203..479 | 922 | 71.5 | Plus |
Dper\GL15298-PA | 586 | GL15298-PA | 186..580 | 124..518 | 431 | 29.9 | Plus |
Dper\GL21420-PA | 421 | GL21420-PA | 1..417 | 102..513 | 332 | 26.6 | Plus |
Dper\GL10775-PA | 433 | GL10775-PA | 29..391 | 146..501 | 220 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22889-PA | 488 | GA22889-PA | 80..488 | 129..520 | 1828 | 85.8 | Plus |
Dpse\GA18416-PA | 586 | GA18416-PA | 186..580 | 124..518 | 431 | 29.9 | Plus |
Dpse\GA10385-PA | 421 | GA10385-PA | 1..417 | 102..513 | 332 | 26.6 | Plus |
Dpse\GA15915-PA | 433 | GA15915-PA | 29..391 | 146..501 | 220 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13535-PA | 589 | GM13535-PA | 98..589 | 15..520 | 2568 | 94.9 | Plus |
Dsec\GM22611-PA | 130 | GM22611-PA | 1..130 | 391..520 | 685 | 99.2 | Plus |
Dsec\GM18638-PA | 585 | GM18638-PA | 185..579 | 124..518 | 414 | 29.4 | Plus |
Dsec\GM13895-PA | 421 | GM13895-PA | 1..417 | 102..513 | 320 | 25.7 | Plus |
Dsec\GM15983-PA | 432 | GM15983-PA | 68..391 | 178..501 | 203 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15491-PA | 605 | GD15491-PA | 100..605 | 15..520 | 2668 | 97.8 | Plus |
Dsim\GD24023-PA | 385 | GD24023-PA | 49..379 | 188..518 | 379 | 31.4 | Plus |
Dsim\GD17596-PA | 421 | GD17596-PA | 1..417 | 102..513 | 318 | 25.5 | Plus |
Dsim\GD11736-PA | 432 | GD11736-PA | 68..391 | 178..501 | 205 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17002-PA | 596 | GJ17002-PA | 105..596 | 29..520 | 2252 | 82.1 | Plus |
Dvir\GJ18038-PA | 586 | GJ18038-PA | 186..580 | 124..518 | 429 | 29.6 | Plus |
Dvir\GJ13311-PA | 421 | GJ13311-PA | 1..421 | 102..517 | 333 | 25.6 | Plus |
Dvir\GJ21366-PA | 433 | GJ21366-PA | 29..391 | 146..501 | 229 | 25 | Plus |
Dvir\GJ21365-PA | 433 | GJ21365-PA | 42..404 | 152..515 | 222 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25605-PA | 607 | GK25605-PA | 116..607 | 29..520 | 2485 | 91.7 | Plus |
Dwil\GK24269-PA | 582 | GK24269-PA | 182..576 | 124..518 | 414 | 29.1 | Plus |
Dwil\GK17535-PA | 421 | GK17535-PA | 1..417 | 102..513 | 329 | 26.4 | Plus |
Dwil\GK19550-PA | 433 | GK19550-PA | 22..391 | 139..501 | 197 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15287-PA | 601 | GE15287-PA | 110..601 | 29..520 | 2645 | 99.2 | Plus |
Dyak\GE21166-PA | 585 | GE21166-PA | 185..579 | 124..518 | 416 | 29.4 | Plus |
Dyak\GE20534-PA | 421 | GE20534-PA | 1..417 | 102..513 | 320 | 25.7 | Plus |
Dyak\GE14259-PA | 432 | GE14259-PA | 22..391 | 139..501 | 219 | 24.7 | Plus |
Translation from 132 to 1694
> GH11003.hyp MSHNGAGLGAGSGGSPIPPTTVMYSQLQPWSQAGAPPCMEPVMGPSIPPR VGAAYETPTKHPWRPAMAYELIQVKHMPEQPVTNQLTKQCFLPKGMKTDG MIFPNLVTGFDRNPQHAARAALYTRYTSNEWYNNNMTKYSESNMNRNLSE RMRNDAVRLMRETDEKATSGQRDAGRRLGERITDLTFWRNELNAELEKLI AEMSDINELQRQCGKALLDLEIPLHIAQECLFHRESRQGTEKVHDIVEKA LLVEINNLRNSRDRLGGLHEKISKQALDCRGAQHLLEDDVSHKESSLGID SMCHQLNNHSRGITYYGGIEKFDPSVSTQESWAQASSEHVRRSQAERAKL SQLRSDAQSVVNSVATTVWDFWSNTNNAFDRRSQEMAEAKNRVQLHLQKV QQELFDMEKHLFLLQKAIQDKSGPLKVAQTRLEARSHREGVELCKDHAQD RLVQEVQDIQGAVETLHHKLMEAEATHQGLLKTRCTLEVDLRNKVNALFI DREKCMSLRRSFPVSNLIKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32820-PB | 520 | CG32820-PB | 1..520 | 1..520 | 2722 | 100 | Plus |
CG32819-PB | 520 | CG32819-PB | 1..520 | 1..520 | 2722 | 100 | Plus |
CG17450-PC | 520 | CG17450-PC | 1..520 | 1..520 | 2722 | 100 | Plus |
CG17450-PA | 520 | CG17450-PA | 1..520 | 1..520 | 2722 | 100 | Plus |
CG32820-PA | 601 | CG32820-PA | 110..601 | 29..520 | 2574 | 100 | Plus |