BDGP Sequence Production Resources |
Search the DGRC for GH11071
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 110 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | mxt-RA |
Protein status: | GH11071.pep: gold |
Preliminary Size: | 2328 |
Sequenced Size: | 2347 |
Gene | Date | Evidence |
---|---|---|
CG2950 | 2002-12-10 | Blastp of sequenced clone |
CG2950 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2950 | 2008-04-29 | Release 5.5 accounting |
CG2950 | 2008-08-15 | Release 5.9 accounting |
CG2950 | 2008-12-18 | 5.12 accounting |
2347 bp (2347 high quality bases) assembled on 2002-12-10
GenBank Submission: BT003302
> GH11071.complete CAACACCCACCGTAAAAAACGATTTTAGTCGCAGTCGCAGAGATTTTGGT TTTGGGGGAGGTGCGGAAACAGCTTCTACGATTCATTTTTGATCAATTCT TCAACAACATTTAAACGAACGAATAAGTTAGCAGACCATATAGACTGAAA TCAGCAGATCCGGACACCAGGCGGGACAACCTTAAGACTTCTTCACGAGA CGATATCGAATCCAACGAATCCCGAGAATGGCTCACACACACCTGGGACG CGCCGTGAAAAACATTGAGGCGCCACGCCCGTTGAAGACACAATCGCGAT CGTCGTTGAAGAACAGCTACCTGGTGATCGAGGAGCTAATCCAGTTGATA GACAACGTGACCGTCGGTCTTCAGTCGTGCAACACCACGCCGGAATCGAT CACGCTGCTCCTGCACAACCTCCGGGTGCATGGACCGCAACTGGAGGCGG TGTCCAAGGATACACTGGACCGGGCCTTCGTCGTTTTCCGCAACGCTTCG CAGGACGAACGGCTGAATATAACGACGCGCCTCAAGCTGCTCGAACTCAT CGAGCTGCGCGCCAAGAGCTGGGACAATGACGACACAATCGCGTACTACA AGTCCAAGCAGCAGATCTCCAACGTGGAGCTGCCTTCGGAATACCAGTAC GATGCCGGCGTGCAGCCTGGCGCCTTCAGCACCTCCCCCACATTCGGCGT CAGCGGCGGTGTTGGTGGCGTTAACGATGGAGCCGCAGCCGCCGCTGCCG CCGTCTTCAATGCAGCATCTGCAGCTGCAGCCGCCCAAGCTGCGGCCATT GCGGCCGTGGGCACATCCAACCAGCAGCACATGCTGCTGCCGCCCGGTGA GGTCATTCGTAATTCGGGCAAGTTCCCCAAACCGACCAAGATTCCTGGCA AGACGTACTGCAAGGACGAGGTCGTGATTCGCAATGCTGACTCCGGCAAA GTAATGGGCATCAAGGGGCGTCGCGTGCACATGATCGAGGAGCTAAGCGA AACCATTATATCGTTTCAAAGAGTCAACCCGGGTGCCAAGGAGCGTTTGG TGCAGATTACTGGTCCAGCTGAGGATAAAATTAACTATGCCAAACAACTT ATGGAGGACACCATTCGTCGGAACGCCTCGCCGGTGCGCCTGGAACCCGC TCCTGCCGTTGGAGGATCCTGCTCCTCGCTTAACTCGTCCAACTCGGACG ACGCCATTGTGCAACCAAGAACGCCAACCGGAAGCAGTTTGGCCAACCGG CTAAGCTTTAACTCGGCCCAAAACTTCATGACCGCCACAGCTGCTGCACA GCAGATCTCGCAGCAGATGCACCACCAAACGCATCACCTGCAGCACCAAC AGCAGCAGCAGGTCGCCGCAGTAGCCGCCGCAGCAGCAGCGGCGGCACAT GCTCAGGCGACAGCCGCTGCCGGTAAAGTCTTGCGTCCCAATCAACAGCT GCTAATGCACTCATATTCCACAAACGATGCTTCCGTAGGTGAATACAAGT TCACGGTCAACGTGGGCCAGCACCTGATCAAGATCACCGGCGACTGCTGC GAACTAGTGCGCGTGGCCAAACTCGTGCTCGATGACTATTTTAGCAGCTC GGAGTTTCTGGCATCCATTGAGGCTGGCGCCGCCTTCGACGGCACTTCGC TGGTGACCACGCCATCGACTCCGCTTCCCGGAGCCGGGCCGCCGCAATTT TGGCTGCCCGGCACGGACAGTGGCATTGGACTGAATTGCGTTGTTTCCTC GTCAGCGAACAACAATGGTGAAGGCGACGACGAGGTGTTCGCTGAGCCCA GCAATGGAGGATCATCGACTAGCAATCAGAATGGACTGGCCAGATCGCGT CGCAGCCACTTTTCGCGCAAGGAGTCCACGCCGGAGACCAAGGGCGCTCG GGAAAAGGGTGACTTGGACGATTTGGCAGGCACCAATTCCTTGAAAAGCA ATGCATCTCGCGTTTCTTACGATATTGAACACTTGCTCTACTACTCCATG AGTCCGCACTCGTGGACCCTGCCCACCGACTGGCAAAAGATGCAGGAGAC AGCGCCCTCGATTCTGCGCAACAAGGATCTGCAGGATGAGAGCCAGCGCT TCGATGGTGATAAGTATCTGGCCAGCATTAAGACGGCCGCCAAGCGAGAC ATTGTGGCTGCCGATGAGGTCGAGACTCTGGACGAATAAAGCCATCAATC GAGCGGCTCGAACTGACAATATAGAGTGTCCCGGGGTGAAGTGCCTGCTC CCAGACGGAGCTGCAGTATGCTTCAATGCTTTTGGCCATGGCCACATCTA ACAATCGCAAACTCAAAACGACCAAATGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2950-RA | 2832 | CG2950-RA | 11..2357 | 1..2347 | 11675 | 99.8 | Plus |
CG2950.e | 2886 | CG2950.e | 1..2347 | 1..2347 | 11675 | 99.8 | Plus |
CG2950-RD | 3551 | CG2950-RD | 11..2086 | 1..2076 | 10380 | 100 | Plus |
CG2950-RD | 3551 | CG2950-RD | 3276..3549 | 2074..2347 | 1310 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 4844759..4845334 | 629..54 | 2880 | 100 | Minus |
chr2L | 23010047 | chr2L | 4843282..4843762 | 1565..1085 | 2315 | 98.8 | Minus |
chr2L | 23010047 | chr2L | 4842834..4843227 | 1956..1563 | 1955 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 4844371..4844694 | 951..628 | 1620 | 100 | Minus |
chr2L | 23010047 | chr2L | 4841223..4841475 | 2326..2074 | 1265 | 100 | Minus |
chr2L | 23010047 | chr2L | 4842655..4842774 | 2076..1957 | 600 | 100 | Minus |
chr2L | 23010047 | chr2L | 4844204..4844279 | 1023..948 | 380 | 100 | Minus |
chr2L | 23010047 | chr2L | 4843828..4843890 | 1084..1022 | 315 | 100 | Minus |
chr2L | 23010047 | chr2L | 4846355..4846409 | 55..1 | 275 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 4845642..4846217 | 629..54 | 2880 | 100 | Minus |
2L | 23513712 | 2L | 4844166..4844646 | 1565..1085 | 2405 | 100 | Minus |
2L | 23513712 | 2L | 4843718..4844111 | 1956..1563 | 1970 | 100 | Minus |
2L | 23513712 | 2L | 4845254..4845577 | 951..628 | 1620 | 100 | Minus |
2L | 23513712 | 2L | 4842076..4842349 | 2347..2074 | 1310 | 98.5 | Minus |
2L | 23513712 | 2L | 4843539..4843658 | 2076..1957 | 600 | 100 | Minus |
2L | 23513712 | 2L | 4845087..4845162 | 1023..948 | 380 | 100 | Minus |
2L | 23513712 | 2L | 4844712..4844774 | 1084..1022 | 315 | 100 | Minus |
2L | 23513712 | 2L | 4847238..4847292 | 55..1 | 275 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 4845642..4846217 | 629..54 | 2880 | 100 | Minus |
2L | 23513712 | 2L | 4844166..4844646 | 1565..1085 | 2405 | 100 | Minus |
2L | 23513712 | 2L | 4843718..4844111 | 1956..1563 | 1970 | 100 | Minus |
2L | 23513712 | 2L | 4845254..4845577 | 951..628 | 1620 | 100 | Minus |
2L | 23513712 | 2L | 4842076..4842349 | 2347..2074 | 1310 | 98.5 | Minus |
2L | 23513712 | 2L | 4843539..4843658 | 2076..1957 | 600 | 100 | Minus |
2L | 23513712 | 2L | 4845087..4845162 | 1023..948 | 380 | 100 | Minus |
2L | 23513712 | 2L | 4844712..4844774 | 1084..1022 | 315 | 100 | Minus |
2L | 23513712 | 2L | 4847238..4847292 | 55..1 | 275 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 4841221..4841473 | 2076..2328 | 99 | <- | Minus |
chr2L | 4842656..4842774 | 1957..2075 | 100 | <- | Minus |
chr2L | 4842834..4843227 | 1563..1956 | 99 | <- | Minus |
chr2L | 4843285..4843449 | 1398..1562 | 98 | == | Minus |
chr2L | 4843508..4843762 | 1085..1339 | 98 | <- | Minus |
chr2L | 4843828..4843888 | 1024..1084 | 100 | <- | Minus |
chr2L | 4844204..4844275 | 952..1023 | 100 | <- | Minus |
chr2L | 4844371..4844514 | 808..951 | 100 | == | Minus |
chr2L | 4844591..4844692 | 630..731 | 100 | <- | Minus |
chr2L | 4844759..4845333 | 55..629 | 100 | <- | Minus |
chr2L | 4846356..4846409 | 1..54 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2950-RC | 1..1962 | 228..2189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2950-RC | 1..1962 | 228..2189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2950-RA | 1..1962 | 228..2189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2950-RC | 1..1962 | 228..2189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mxt-RA | 1..1962 | 228..2189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2950-RA | 1..2326 | 1..2328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2950-RA | 1..2326 | 1..2328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2950-RA | 4..2329 | 1..2328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2950-RA | 1..2326 | 1..2328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mxt-RA | 4..2329 | 1..2328 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4842095..4842347 | 2076..2328 | 99 | <- | Minus |
2L | 4843540..4843658 | 1957..2075 | 100 | <- | Minus |
2L | 4843718..4844111 | 1563..1956 | 100 | <- | Minus |
2L | 4844169..4844646 | 1085..1562 | 100 | <- | Minus |
2L | 4844712..4844772 | 1024..1084 | 100 | <- | Minus |
2L | 4845087..4845158 | 952..1023 | 100 | <- | Minus |
2L | 4845254..4845575 | 630..951 | 100 | <- | Minus |
2L | 4845642..4846216 | 55..629 | 100 | <- | Minus |
2L | 4847239..4847292 | 1..54 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4842095..4842347 | 2076..2328 | 99 | <- | Minus |
2L | 4843540..4843658 | 1957..2075 | 100 | <- | Minus |
2L | 4843718..4844111 | 1563..1956 | 100 | <- | Minus |
2L | 4844169..4844646 | 1085..1562 | 100 | <- | Minus |
2L | 4844712..4844772 | 1024..1084 | 100 | <- | Minus |
2L | 4845087..4845158 | 952..1023 | 100 | <- | Minus |
2L | 4845254..4845575 | 630..951 | 100 | <- | Minus |
2L | 4845642..4846216 | 55..629 | 100 | <- | Minus |
2L | 4847239..4847292 | 1..54 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4842095..4842347 | 2076..2328 | 99 | <- | Minus |
2L | 4843540..4843658 | 1957..2075 | 100 | <- | Minus |
2L | 4843718..4844111 | 1563..1956 | 100 | <- | Minus |
2L | 4844169..4844646 | 1085..1562 | 100 | <- | Minus |
2L | 4844712..4844772 | 1024..1084 | 100 | <- | Minus |
2L | 4845087..4845158 | 952..1023 | 100 | <- | Minus |
2L | 4845254..4845575 | 630..951 | 100 | <- | Minus |
2L | 4845642..4846216 | 55..629 | 100 | <- | Minus |
2L | 4847239..4847292 | 1..54 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 4843540..4843658 | 1957..2075 | 100 | <- | Minus |
arm_2L | 4842095..4842347 | 2076..2328 | 99 | <- | Minus |
arm_2L | 4847239..4847292 | 1..54 | 100 | Minus | |
arm_2L | 4843718..4844111 | 1563..1956 | 100 | <- | Minus |
arm_2L | 4844169..4844646 | 1085..1562 | 100 | <- | Minus |
arm_2L | 4844712..4844772 | 1024..1084 | 100 | <- | Minus |
arm_2L | 4845087..4845158 | 952..1023 | 100 | <- | Minus |
arm_2L | 4845254..4845575 | 630..951 | 100 | <- | Minus |
arm_2L | 4845642..4846216 | 55..629 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4842095..4842347 | 2076..2328 | 99 | <- | Minus |
2L | 4843540..4843658 | 1957..2075 | 100 | <- | Minus |
2L | 4843718..4844111 | 1563..1956 | 100 | <- | Minus |
2L | 4844169..4844646 | 1085..1562 | 100 | <- | Minus |
2L | 4844712..4844772 | 1024..1084 | 100 | <- | Minus |
2L | 4845087..4845158 | 952..1023 | 100 | <- | Minus |
2L | 4845254..4845575 | 630..951 | 100 | <- | Minus |
2L | 4845642..4846216 | 55..629 | 100 | <- | Minus |
2L | 4847239..4847292 | 1..54 | 100 | Minus |
Translation from 227 to 2188
> GH11071.pep MAHTHLGRAVKNIEAPRPLKTQSRSSLKNSYLVIEELIQLIDNVTVGLQS CNTTPESITLLLHNLRVHGPQLEAVSKDTLDRAFVVFRNASQDERLNITT RLKLLELIELRAKSWDNDDTIAYYKSKQQISNVELPSEYQYDAGVQPGAF STSPTFGVSGGVGGVNDGAAAAAAAVFNAASAAAAAQAAAIAAVGTSNQQ HMLLPPGEVIRNSGKFPKPTKIPGKTYCKDEVVIRNADSGKVMGIKGRRV HMIEELSETIISFQRVNPGAKERLVQITGPAEDKINYAKQLMEDTIRRNA SPVRLEPAPAVGGSCSSLNSSNSDDAIVQPRTPTGSSLANRLSFNSAQNF MTATAAAQQISQQMHHQTHHLQHQQQQQVAAVAAAAAAAAHAQATAAAGK VLRPNQQLLMHSYSTNDASVGEYKFTVNVGQHLIKITGDCCELVRVAKLV LDDYFSSSEFLASIEAGAAFDGTSLVTTPSTPLPGAGPPQFWLPGTDSGI GLNCVVSSSANNNGEGDDEVFAEPSNGGSSTSNQNGLARSRRSHFSRKES TPETKGAREKGDLDDLAGTNSLKSNASRVSYDIEHLLYYSMSPHSWTLPT DWQKMQETAPSILRNKDLQDESQRFDGDKYLASIKTAAKRDIVAADEVET LDE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14414-PA | 651 | GF14414-PA | 1..651 | 1..653 | 2581 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24348-PA | 650 | GG24348-PA | 1..650 | 1..653 | 2764 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13665-PA | 663 | GH13665-PA | 1..663 | 1..653 | 2374 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mxt-PE | 653 | CG2950-PE | 1..653 | 1..653 | 3319 | 100 | Plus |
mxt-PC | 653 | CG2950-PC | 1..653 | 1..653 | 3319 | 100 | Plus |
mxt-PA | 653 | CG2950-PA | 1..653 | 1..653 | 3319 | 100 | Plus |
mxt-PB | 653 | CG2950-PB | 1..653 | 1..653 | 3319 | 100 | Plus |
mxt-PG | 631 | CG2950-PG | 1..631 | 1..653 | 3174 | 96.6 | Plus |
mxt-PF | 629 | CG2950-PF | 1..629 | 1..653 | 3167 | 96.3 | Plus |
mxt-PD | 775 | CG2950-PD | 1..623 | 1..627 | 3138 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21020-PA | 664 | GI21020-PA | 1..664 | 1..653 | 2406 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18748-PA | 656 | GL18748-PA | 1..656 | 1..653 | 2494 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15540-PA | 656 | GA15540-PA | 1..656 | 1..653 | 2539 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18068-PA | 648 | GM18068-PA | 1..648 | 1..653 | 3367 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22686-PA | 648 | GD22686-PA | 1..648 | 1..653 | 3353 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16131-PA | 671 | GJ16131-PA | 1..671 | 1..653 | 2449 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24594-PA | 664 | GK24594-PA | 1..664 | 1..653 | 2417 | 77.6 | Plus |
Dwil\GK24595-PA | 216 | GK24595-PA | 64..215 | 409..569 | 338 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14664-PA | 657 | GE14664-PA | 1..657 | 1..653 | 2879 | 94.8 | Plus |
Translation from 227 to 2188
> GH11071.hyp MAHTHLGRAVKNIEAPRPLKTQSRSSLKNSYLVIEELIQLIDNVTVGLQS CNTTPESITLLLHNLRVHGPQLEAVSKDTLDRAFVVFRNASQDERLNITT RLKLLELIELRAKSWDNDDTIAYYKSKQQISNVELPSEYQYDAGVQPGAF STSPTFGVSGGVGGVNDGAAAAAAAVFNAASAAAAAQAAAIAAVGTSNQQ HMLLPPGEVIRNSGKFPKPTKIPGKTYCKDEVVIRNADSGKVMGIKGRRV HMIEELSETIISFQRVNPGAKERLVQITGPAEDKINYAKQLMEDTIRRNA SPVRLEPAPAVGGSCSSLNSSNSDDAIVQPRTPTGSSLANRLSFNSAQNF MTATAAAQQISQQMHHQTHHLQHQQQQQVAAVAAAAAAAAHAQATAAAGK VLRPNQQLLMHSYSTNDASVGEYKFTVNVGQHLIKITGDCCELVRVAKLV LDDYFSSSEFLASIEAGAAFDGTSLVTTPSTPLPGAGPPQFWLPGTDSGI GLNCVVSSSANNNGEGDDEVFAEPSNGGSSTSNQNGLARSRRSHFSRKES TPETKGAREKGDLDDLAGTNSLKSNASRVSYDIEHLLYYSMSPHSWTLPT DWQKMQETAPSILRNKDLQDESQRFDGDKYLASIKTAAKRDIVAADEVET LDE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mxt-PE | 653 | CG2950-PE | 1..653 | 1..653 | 3319 | 100 | Plus |
mxt-PC | 653 | CG2950-PC | 1..653 | 1..653 | 3319 | 100 | Plus |
mxt-PA | 653 | CG2950-PA | 1..653 | 1..653 | 3319 | 100 | Plus |
mxt-PB | 653 | CG2950-PB | 1..653 | 1..653 | 3319 | 100 | Plus |
mxt-PG | 631 | CG2950-PG | 1..631 | 1..653 | 3174 | 96.6 | Plus |