BDGP Sequence Production Resources |
Search the DGRC for GH11112
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 111 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1927-RA |
Protein status: | GH11112.pep: gold |
Preliminary Size: | 1176 |
Sequenced Size: | 1188 |
Gene | Date | Evidence |
---|---|---|
CG1927 | 2000-02-14 | Blastp of sequenced clone |
CG5687 | 2001-01-01 | Release 2 assignment |
CG1927 | 2001-01-01 | Release 2 assignment |
CG1960 | 2001-01-01 | Release 2 assignment |
CG5691 | 2001-01-01 | Release 2 assignment |
CG11814 | 2001-01-01 | Release 2 assignment |
CG1927 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1927 | 2008-04-29 | Release 5.5 accounting |
CG1927 | 2008-08-15 | Release 5.9 accounting |
CG1927 | 2008-12-18 | 5.12 accounting |
1188 bp (1188 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145665
> GH11112.complete AAAAAGTTCGAGTTCGCCGAGAGAAGCGTGAAAATCCGATATCGAAACTA CGTTTTTTTTTTAGTCATTATACCGATTGGCTATGCAAATTTAATTGCGG ATCTCCCAAATCATCGAAAAGCCAACAGGTCGCCCCTCAACCAAAATAAA CACAACAATCGAGCCGCAAATGAAACGGGCAAAAACAGCAAAGGCAACTG GCGAACCGCTTAACCGGTTTCGAAATATCCATCGTAGCACAGTTTCCTCG TCCATATAATATTCCGATTGCAGTGGATCAAAATATACACACACACACTC GCATATAAATTCGCAGATATACGTTGTTTGTGTGAGTTTCTGTTTGTGGT TCGCGTGAAAAATAGTTTTGACAAATAAATACAAAGCCAGACGCCGACAT AACTGTGAAAATAAACCATAAGCCAGACAGCAGCCATGGGTTATTCCATT AAGAACTGCGAAACGGGTGAGTTGGAGTACTTCTACACAGACACCGTCCG CGTTAATAGACCGGCCTTCGATGAGGAGACCGGTGAACCGATCCACGACC AGGTGACCAAGGTTCACTTCCGCAAACACACGAATTTCCATGTACCCAAG CACTATCTCCGCGGAACCATATGCGATGAGGTAGACGACGAGCTGGCCAA TACGGTGAGATATGGGGCAGCCACCGCGATTCCCAACAGGGCACCCAAAA AGGTCACTCCGGGCTACGAACGCGAGGACTATTGTCAAATGGATGGCGTG AGCAACAACATAATCCTGGGCTACAACCGCAACCCCTACTTGCTGTTCCT GGTGCCCACGCTCTTCTGCTACAACTTCGTCATTGGAGCCACGCTGGCCC TCATCGAGATCGTCCTGCACATGATGTCCCACCACAGGAACGGTCTCACC ATGCAGAAGAGCCTGTACTTCCGTAGTCCACTCAACGTGCTGTCCTCGCA GTTCTGCGCCATCTGCCGCACGGAAACCGACAGCAAGTACAACCGCATCT TCGATATCCTTAACAAGCAGATGCGCAACGCACATCGCTCCGAGGCGCTG AAGGACATGGCCAAGGCAATTGGATAAGCTGGGAGAGATTCGATTTGATA TGGTCCATATATTTAACACAAATGTTTTTGTCACACGGTCAACAAAAAAT AAATGCACTCGTTTATCACTCAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1969162..1969614 | 453..1 | 2265 | 100 | Minus |
chr3L | 24539361 | chr3L | 1966287..1966701 | 1171..757 | 2075 | 100 | Minus |
chr3L | 24539361 | chr3L | 1966762..1967066 | 756..452 | 1525 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1969600..1970052 | 453..1 | 2265 | 100 | Minus |
3L | 28110227 | 3L | 1966723..1967139 | 1173..757 | 2085 | 100 | Minus |
3L | 28110227 | 3L | 1967200..1967504 | 756..452 | 1525 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1969600..1970052 | 453..1 | 2265 | 100 | Minus |
3L | 28103327 | 3L | 1966723..1967139 | 1173..757 | 2085 | 100 | Minus |
3L | 28103327 | 3L | 1967200..1967504 | 756..452 | 1525 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1966287..1966701 | 757..1171 | 100 | <- | Minus |
chr3L | 1966762..1967064 | 454..756 | 100 | <- | Minus |
chr3L | 1969162..1969614 | 1..453 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1927-RA | 1..642 | 436..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1927-RA | 1..642 | 436..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1927-RA | 1..642 | 436..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1927-RA | 1..642 | 436..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1927-RA | 1..642 | 436..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1927-RA | 24..1194 | 1..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1927-RA | 24..1194 | 1..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1927-RA | 28..1198 | 1..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1927-RA | 24..1194 | 1..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1927-RA | 28..1198 | 1..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1966725..1967139 | 757..1171 | 100 | <- | Minus |
3L | 1967200..1967502 | 454..756 | 100 | <- | Minus |
3L | 1969600..1970052 | 1..453 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1966725..1967139 | 757..1171 | 100 | <- | Minus |
3L | 1967200..1967502 | 454..756 | 100 | <- | Minus |
3L | 1969600..1970052 | 1..453 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1966725..1967139 | 757..1171 | 100 | <- | Minus |
3L | 1967200..1967502 | 454..756 | 100 | <- | Minus |
3L | 1969600..1970052 | 1..453 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1966725..1967139 | 757..1171 | 100 | <- | Minus |
arm_3L | 1967200..1967502 | 454..756 | 100 | <- | Minus |
arm_3L | 1969600..1970052 | 1..453 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1966725..1967139 | 757..1171 | 100 | <- | Minus |
3L | 1967200..1967502 | 454..756 | 100 | <- | Minus |
3L | 1969600..1970052 | 1..453 | 100 | Minus |
Translation from 435 to 1076
> GH11112.pep MGYSIKNCETGELEYFYTDTVRVNRPAFDEETGEPIHDQVTKVHFRKHTN FHVPKHYLRGTICDEVDDELANTVRYGAATAIPNRAPKKVTPGYEREDYC QMDGVSNNIILGYNRNPYLLFLVPTLFCYNFVIGATLALIEIVLHMMSHH RNGLTMQKSLYFRSPLNVLSSQFCAICRTETDSKYNRIFDILNKQMRNAH RSEALKDMAKAIG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24943-PA | 214 | GF24943-PA | 1..214 | 1..213 | 914 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14541-PA | 213 | GG14541-PA | 1..213 | 1..213 | 1065 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16499-PA | 223 | GH16499-PA | 1..223 | 1..213 | 767 | 64.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1927-PA | 213 | CG1927-PA | 1..213 | 1..213 | 1140 | 100 | Plus |
CG1927-PB | 210 | CG1927-PB | 4..210 | 7..213 | 1109 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12175-PA | 218 | GI12175-PA | 4..218 | 7..213 | 709 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22661-PA | 215 | GL22661-PA | 1..215 | 1..213 | 868 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15136-PA | 215 | GA15136-PA | 1..215 | 1..213 | 863 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14150-PA | 213 | GM14150-PA | 1..213 | 1..213 | 1069 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13420-PA | 213 | GD13420-PA | 1..213 | 1..213 | 1093 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13450-PA | 222 | GJ13450-PA | 1..222 | 1..213 | 798 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12609-PA | 227 | GK12609-PA | 2..227 | 5..213 | 751 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20895-PA | 211 | GE20895-PA | 1..211 | 1..213 | 1054 | 91.5 | Plus |
Translation from 435 to 1076
> GH11112.hyp MGYSIKNCETGELEYFYTDTVRVNRPAFDEETGEPIHDQVTKVHFRKHTN FHVPKHYLRGTICDEVDDELANTVRYGAATAIPNRAPKKVTPGYEREDYC QMDGVSNNIILGYNRNPYLLFLVPTLFCYNFVIGATLALIEIVLHMMSHH RNGLTMQKSLYFRSPLNVLSSQFCAICRTETDSKYNRIFDILNKQMRNAH RSEALKDMAKAIG*