BDGP Sequence Production Resources |
Search the DGRC for GH11142
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 111 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7816-RD |
Protein status: | GH11142.pep: validated not full length |
Preliminary Size: | 3330 |
Sequenced Size: | 3378 |
Gene | Date | Evidence |
---|---|---|
CG7816 | 2001-01-01 | Release 2 assignment |
CG7816 | 2001-09-19 | Blastp of sequenced clone |
CG7816 | 2008-04-29 | Release 5.5 accounting |
CG7816 | 2008-08-15 | Release 5.9 accounting |
CG7816 | 2008-12-18 | 5.12 accounting |
3378 bp assembled on 2006-11-09
GenBank Submission: AY060276
> GH11142.complete CCGACGCGATAACACACGAATTGTGGAGCTTGGAGCATAAATTTCCGCAT TAGCAACGCTCAAGTGTGATATAGTTTACTGGTATTGTGTTAACAGTTGG CAGTATACAAATACCTCACGCCACAAATCAACTTTAAATCGCAGAAGAAT CTATTGTCCTCTAGTCTTCCAGCAAAATAGTGCCACATTATGTTTATTAA GTACTTGTGCGATTCGCCATATTCGTGAATAACTAACTAACTATCTGAGT GTAATTGACAGGATTCCCGGAATTAATCTGAACTGTCTTTTCAGTGAAGG CTCGCCCAAGAAACACAGCAATTAGTGCAACAGCTAAACAGATAATCCCG AGTTATTGTGCCGAAATTGAATTATTTACTCATCTGATCAAACCGTAAAA GCAAACTTGAGTGGCTTCCTAGTAGCGATTTTCGACTAATTTAAAAGAAA CCTGAATCTGAACAAGAAGACTCTCTTTGCTATTGTTGTTTTGCGAATCT TTAAAGGGCAAATACAGTAGAATAACAATAAAAGCGTGAAACAGTCATAG TTCGCATAGAGTATTTGTAATATTGGAACAGATGAACTGAATGATAGTTA ATACAGCCTCCTAGTCTCAGTCTTTAGAGATATTTTGGGTAACTCAAGTA ATTACACGATGTCTAAATCTAATCTAGCTCATTTGCTTTCTGATAGTTCA ATGACAACGACACTGCGAAAGATAAGAGTGTAGTATATACGTATATAGTT ATTGTATAGCCATAGCTTACCGGATTGATTTCGCATCTCGCTACTGAAGT TCCGAGGCATTCCCATTCTGCCCGTTCTGTCGGGGATTAGACATCATTCG TCCGCTTCCAAGTTTGATTCCCCAATACACATGCGGAGTATTGCCGCTTA GCAAAACCGCCGAAATCATGTCACTCCATTGTGCCAGCGCCATCGTAATC TTATCGCGGCAAAGTGAACAGTTTAAGCTGCATCGTGCACATCAAATCGG AAATCAAATGGAAACAAAGTATCTTGACGTGGGCGTTCCGAAGCAGCGTC TCCTGAAAATTCGTTTAGTCTGTTTCTGCACATTGGAAGCGTCGGTTATC GAGCTTGGAAATTAATTTTCGCCCAATTTACAATCTGTTTTGGTTGGTGG CAGTGATATAAAAGTAGTTTACGATCGAGAGAAGTTTGATTTACAAGTAG AATTCTTCTACTAATCGTACAGCAGATTCTAAAATAAAAAATCCTGGAAA GCAATCACATTCAAACTAACTAACTGCATCTAAATTGCTTATTAATTATG GAAAAAGCCAATTAATTATTGCTCGAACTCGAACAAGCCATATTGGCAAA TATATATTTATCATTTAAGTACCTGCATTTTAGATAAAGTCTACCAGGTT CGCTGTGATACGGGTAACAAGTTCCACAACGAACAATTTGATATTTTATT GGTTATAGTGAGGCAGGACACGCTTACTCATCCTGATGGAGTAGCTATCG GGCAATGGTCTTAGTTTGATTGACTGCCGTTCCCTATGAAGCCGTCTAGT CACACTTAAGTTGCCATGATTAAATTTTACAGAGACTCGCTTATCGAACC TGACAACGAGCGCAGTTGAGAGAGTTTTTCCCTGCCCCTTTATTGATTAT GGCTGACATTGTCCATATCTAAAGGATTTTCGCATCACCGTCTGTCTGAT ACTAAGAACCGCATCTAGTTATTCAATGATTTTGTTGCCAGGTGGCGGAT TTGGGGAAACATTTGCTTAACTGGCTATTTGTATCAAAATTTACGTGTGT GCTGACATTTCTTAAACCATTTAAATTATATTTTCTTTACTAGCCGAGTC ATCATCGATCACGGCACATACTCCACCGAAAGTCACTGGACATGAGCAGG CAGCAGTGACTGAAGAAACCCAACCCAGTTCCAGCACAGAGCAGCGCATA AGTAGCCGTAAAAAGGCAGCCGAAAATGACCACGAACAGCAGCTTCTTCG ATGAACACATCGCCATGATATACTCCAACCTGATGGACCAGTACATGCCC GAGTACTTCAAAAGCTTTGAGTACACGCCATGGGTTTTCTCCCTGCTGGG ATCGGTGGTAATTGGACTGAGTGGCATATTCCCGCTGATCATCATTCCCA CGGAGGAGAAAATGGCTAAGGAGGGATACAAAGATCGTAAGTCACATGCG TACGAAAAGTATATCAATTGAACTTGAATCACATCTCACCCTACAGCTGC AGATTCAAAACTCCTGCGAGTGCTTCTGAGTTTCGCGGTCGGCGGTCTGC TGGGCGATGTGTTCCTTCACCTGTTGCCAGAAGCCTGGGAGGGCGATAAT CAAGATCCTTCTAGTCACCCATCCCTGCGCTCGGGCCTTTGGGTACTTTC CGGCATACTGATCTTCACGATCGTGGAGAAAATCTTTTCCGGATATGCCA GCGCGGACGAGGAGAACCCTCAGCCCAAGTGCGTGGAGATAGCCAACTGC CTGTTGCGTCGACATGGCGGCCAACTACCAGAGGGCGAAACCTCTGAGAG TTGTGGCGGCGCCTGCGACATCGAAGATGTAGGTAAAGTCTGTTTCCTAC GCGAGCAGGAACAGAAGTCAAAGGAAAGGAAGGAACAGCCGAAGAAGGTG GCTGGTTATCTGAACCTCTTGGCCAACTCAATTGACAATTTCACACACGG TCTAGCCGTGGCTGGATCCTTTTTGGTGTCCTTCAGACACGGCATTCTAG CCACTTTTGCCATATTGCTTCATGAAATTCCGCACGAGGTGGGGGATTTC GCAATCCTGCTTCGATCCGGATTCAGTCGCTGGGACGCCGCGCGTGCGCA ACTACTCACGGCGGGAGCTGGCCTGCTCGGTGCTCTGGTGGCCATCGGAG GCTCCGGCGTAACGTCGGCCATGGAGGCACGTACTTCGTGGATTATGCCG TTCACCGCCGGCGGCTTTCTGCACATTGCTCTGGTCACAGTATTACCTGA TCTCTTGAAGGAGGAGGAGCGCAAGGAGTCCATTAAGCAGCTGCTAGCAC TGGTATTTGGCATTGCGTTAATGGCCGTGATGACCATGCTATTCGAACAC TAGGAACTTTAGCTGACAGCAGTATAAGAAGAAAATTGAAAGCAGTTTTT AGTTTGTTCTAAGATTGTCATTGGCAGTTTTAAATTAACATGAATTTGTT GTACTTTATGGGATTCGACATCCTGTCTGCGTTATGTAATTATAGCCAAT ATGAATGATATTTAAACTATTATTAATGATTACGTATTACTGTATCATAC TTATGAAACGAAAATTCAATAGACATTTAAGGGAGAGTCCTTTGCCCTCC ACTATCCACGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7816-RC | 1679 | CG7816-RC | 498..1613 | 2247..3362 | 5580 | 100 | Plus |
CG7816-RE | 1535 | CG7816-RE | 420..1535 | 2247..3362 | 5580 | 100 | Plus |
CG7816-RD | 1494 | CG7816-RD | 379..1494 | 2247..3362 | 5580 | 100 | Plus |
CG7816-RC | 1679 | CG7816-RC | 1..497 | 1690..2186 | 2485 | 100 | Plus |
CG7816-RE | 1535 | CG7816-RE | 76..419 | 1843..2186 | 1720 | 100 | Plus |
CG7816-RD | 1494 | CG7816-RD | 36..378 | 1844..2186 | 1715 | 100 | Plus |
CG7816-RE | 1535 | CG7816-RE | 1..76 | 1067..1142 | 380 | 100 | Plus |
CG7816-RD | 1494 | CG7816-RD | 1..35 | 29..63 | 175 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 25687372..25689730 | 2354..1 | 11430 | 99.1 | Minus |
chr3R | 27901430 | chr3R | 25686181..25686620 | 3360..2924 | 2120 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 25686896..25687312 | 2768..2352 | 2025 | 99 | Minus |
chr3R | 27901430 | chr3R | 25686678..25686833 | 2924..2769 | 780 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 29864889..29867242 | 2354..1 | 11770 | 100 | Minus |
3R | 32079331 | 3R | 29863699..29864137 | 3362..2924 | 2195 | 100 | Minus |
3R | 32079331 | 3R | 29864413..29864829 | 2768..2352 | 2085 | 100 | Minus |
3R | 32079331 | 3R | 29864195..29864350 | 2924..2769 | 780 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 29605720..29608073 | 2354..1 | 11770 | 100 | Minus |
3R | 31820162 | 3R | 29604530..29604968 | 3362..2924 | 2195 | 100 | Minus |
3R | 31820162 | 3R | 29605244..29605660 | 2768..2352 | 2085 | 100 | Minus |
3R | 31820162 | 3R | 29605026..29605181 | 2924..2769 | 780 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Burdock | 6411 | Burdock DMU89994 6411bp Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1). | 135..198 | 1065..1130 | 118 | 66.7 | Plus |
Burdock | 6411 | Burdock DMU89994 6411bp Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1). | 6271..6334 | 1065..1130 | 118 | 66.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 25686181..25686619 | 2925..3360 | 99 | <- | Minus |
chr3R | 25686678..25686833 | 2769..2924 | 100 | <- | Minus |
chr3R | 25686896..25687309 | 2355..2768 | 99 | <- | Minus |
chr3R | 25687372..25689730 | 1..2354 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RD | 1..211 | 1976..2186 | 100 | == | Plus |
CG7816-RD | 212..1068 | 2247..3103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RD | 1..211 | 1976..2186 | 100 | == | Plus |
CG7816-RD | 212..1068 | 2247..3103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RH | 1..211 | 1976..2186 | 100 | == | Plus |
CG7816-RH | 212..1068 | 2247..3103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RD | 1..211 | 1976..2186 | 100 | == | Plus |
CG7816-RD | 212..1068 | 2247..3103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Zip99C-RH | 1..211 | 1976..2186 | 100 | == | Plus |
Zip99C-RH | 212..1068 | 2247..3103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RE | 72..419 | 1836..2186 | 99 | == | Plus |
CG7816-RE | 420..1533 | 2247..3360 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RD | 36..378 | 1844..2186 | 100 | == | Plus |
CG7816-RD | 379..1492 | 2247..3360 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RH | 15..362 | 1838..2186 | 99 | == | Plus |
CG7816-RH | 363..1476 | 2247..3360 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7816-RD | 36..378 | 1844..2186 | 100 | == | Plus |
CG7816-RD | 379..1492 | 2247..3360 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Zip99C-RH | 15..362 | 1838..2186 | 99 | == | Plus |
Zip99C-RH | 363..1476 | 2247..3360 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29863701..29864136 | 2925..3360 | 100 | <- | Minus |
3R | 29864195..29864350 | 2769..2924 | 100 | <- | Minus |
3R | 29864413..29864826 | 2355..2768 | 100 | <- | Minus |
3R | 29864889..29867242 | 1..2354 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29863701..29864136 | 2925..3360 | 100 | <- | Minus |
3R | 29864195..29864350 | 2769..2924 | 100 | <- | Minus |
3R | 29864413..29864826 | 2355..2768 | 100 | <- | Minus |
3R | 29864889..29867242 | 1..2354 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29863701..29864136 | 2925..3360 | 100 | <- | Minus |
3R | 29864195..29864350 | 2769..2924 | 100 | <- | Minus |
3R | 29864413..29864826 | 2355..2768 | 100 | <- | Minus |
3R | 29864889..29867242 | 1..2354 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 25689423..25689858 | 2925..3360 | 100 | <- | Minus |
arm_3R | 25689917..25690072 | 2769..2924 | 100 | <- | Minus |
arm_3R | 25690135..25690548 | 2355..2768 | 100 | <- | Minus |
arm_3R | 25690611..25692964 | 1..2354 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29604532..29604967 | 2925..3360 | 100 | <- | Minus |
3R | 29605026..29605181 | 2769..2924 | 100 | <- | Minus |
3R | 29605244..29605657 | 2355..2768 | 100 | <- | Minus |
3R | 29605720..29608073 | 1..2354 | 100 | Minus |
Translation from 1975 to 2220
> GH11142.pep MTTNSSFFDEHIAMIYSNLMDQYMPEYFKSFEYTPWVFSLLGSVVIGLSG IFPLIIIPTEEKMAKEGYKDRKSHAYEKYIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16226-PA | 357 | GF16226-PA | 1..72 | 1..70 | 342 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11991-PA | 355 | GG11991-PA | 1..70 | 1..70 | 366 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13993-PA | 355 | GH13993-PA | 1..70 | 1..70 | 295 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Zip99C-PJ | 355 | CG7816-PJ | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PI | 355 | CG7816-PI | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PH | 355 | CG7816-PH | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PC | 355 | CG7816-PC | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PE | 355 | CG7816-PE | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PA | 355 | CG7816-PA | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PD | 355 | CG7816-PD | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PF | 355 | CG7816-PF | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PG | 355 | CG7816-PG | 1..70 | 1..70 | 368 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22338-PA | 354 | GI22338-PA | 1..70 | 1..70 | 301 | 74.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13475-PA | 360 | GL13475-PA | 1..70 | 1..70 | 337 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20606-PB | 360 | GA20606-PB | 1..70 | 1..70 | 337 | 81.4 | Plus |
Dpse\GA20606-PA | 360 | GA20606-PA | 1..70 | 1..70 | 337 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12209-PA | 355 | GM12209-PA | 1..70 | 1..70 | 373 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17600-PA | 355 | GD17600-PA | 1..70 | 1..70 | 373 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10525-PA | 355 | GJ10525-PA | 1..70 | 1..70 | 310 | 74.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13376-PA | 355 | GK13376-PA | 1..71 | 1..70 | 320 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10416-PA | 355 | GE10416-PA | 1..70 | 1..70 | 379 | 98.6 | Plus |
Translation from 1975 to 2220
> GH11142.hyp MTTNSSFFDEHIAMIYSNLMDQYMPEYFKSFEYTPWVFSLLGSVVIGLSG IFPLIIIPTEEKMAKEGYKDRKSHAYEKYIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Zip99C-PJ | 355 | CG7816-PJ | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PI | 355 | CG7816-PI | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PH | 355 | CG7816-PH | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PC | 355 | CG7816-PC | 1..70 | 1..70 | 368 | 100 | Plus |
Zip99C-PE | 355 | CG7816-PE | 1..70 | 1..70 | 368 | 100 | Plus |