Clone GH11174 Report

Search the DGRC for GH11174

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:111
Well:74
Vector:pOT2
Associated Gene/TranscriptQC-RA
Protein status:GH11174.pep: gold
Preliminary Size:1300
Sequenced Size:1141

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10487 2001-01-01 Release 2 assignment
CG32412 2002-06-07 Blastp of sequenced clone
CG32412 2003-01-01 Sim4 clustering to Release 3
CG32412 2008-04-29 Release 5.5 accounting
CG32412 2008-08-15 Release 5.9 accounting
CG32412 2008-12-18 5.12 accounting

Clone Sequence Records

GH11174.complete Sequence

1141 bp (1141 high quality bases) assembled on 2002-06-07

GenBank Submission: AY119500

> GH11174.complete
AGCTCTGAAGCGTATAGATGGCGATCGGTTCCGTAGTTTTTGCCGCCGCA
GGCTTGCTGCTCCTCCTCCTCCCGCCGTCGCATCAGCAAGCGACAGCGGG
AAACATTGGATCCCAGTGGCGCGACGATGAGGTCCATTTCAACCGCACCC
TGGACTCCATTTTGGTGCCACGCGTCGTTGGCAGTCGGGGACATCAGCAG
GTGCGCGAGTACCTGGTCCAATCGCTGAACGGCCTTGGCTTCCAAACGGA
AGTGGATGAGTTCAAGCAGAGAGTTCCAGTTTTCGGCGAACTCACGTTTG
CCAACGTAGTGGGCACAATCAATCCCCAGGCTCAGAACTTTCTCGCTCTG
GCCTGCCACTACGACAGCAAGTACTTCCCCAATGATCCCGGCTTTGTGGG
CGCCACTGACTCCGCCGTGCCCTGTGCCATTCTGTTGAACACCGCCAAGA
CCTTGGGCGCGTATCTGCAGAAAGAGTTTCGCAATCGCAGCGATGTGGGA
CTTATGCTCATATTCTTCGATGGCGAGGAGGCCTTTAAGGAGTGGACCGA
TGCGGACTCTGTATACGGATCAAAGCATCTGGCCGCGAAGTTGGCTAGCA
AACGCAGTGGTTCCCAGGCGCAACTAGCTCCACGCAATATAGATCGAATT
GAAGTTCTGGTGCTGCTGGATCTAATTGGGGCGCGGAATCCCAAGTTCTC
CAGTTTTTATGAAAACACCGACGGACTGCACTCCAGTCTCGTGCAGATTG
AGAAATCTCTGCGCACTGCCGGCCAGCTGGAGGGCAATAACAATATGTTT
TTAAGTCGTGTCAGCGGTGGTCTAGTCGACGATGATCATCGACCGTTTTT
AGATGAGAATGTTCCTGTGCTGCATTTGGTAGCCACTCCTTTCCCAGACG
TCTGGCACACGCCTCGGGACAATGCCGCCAATCTGCACTGGCCTTCCATA
CGCAATTTCAACCGTGTTTTCCGTAATTTCGTTTATCAATACCTTAAGCG
GCACACGTCACCAGTGAATTTGCGTTTTTACCGAACATAGTTTATGTTTT
GTCTTATGGCTAAGATTTATTAAGCATAAGTGTAAAGTGTTTTTCGTTAA
TTAAAGTGTCCTAAGGCATGTGTAAAAAAAAAAAAAAAAAA

GH11174.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:51:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG32412-RA 1287 CG32412-RA 78..1202 1..1125 5625 100 Plus
CG32412.a 1156 CG32412.a 138..1156 105..1123 5095 100 Plus
CG32409-RA 1335 CG32409-RA 1148..1335 1125..938 940 100 Minus
CG32412.a 1156 CG32412.a 13..117 1..105 525 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 5894362..5894670 506..198 1545 100 Minus
chr3L 24539361 chr3L 5893401..5893665 1123..859 1310 99.6 Minus
chr3L 24539361 chr3L 5893719..5893926 858..651 1040 100 Minus
chr3L 24539361 chr3L 5893982..5894127 651..506 730 100 Minus
chr3L 24539361 chr3L 5894723..5894821 203..105 495 100 Minus
chr3L 24539361 chr3L 5894901..5895004 104..1 430 94.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:44:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:55:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5901796..5902104 506..198 1545 100 Minus
3L 28110227 3L 5900833..5901099 1125..859 1335 100 Minus
3L 28110227 3L 5901153..5901360 858..651 1040 100 Minus
3L 28110227 3L 5901416..5901561 651..506 730 100 Minus
3L 28110227 3L 5902335..5902438 104..1 520 100 Minus
3L 28110227 3L 5902157..5902255 203..105 495 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:23:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 5894896..5895204 506..198 1545 100 Minus
3L 28103327 3L 5893933..5894199 1125..859 1335 100 Minus
3L 28103327 3L 5894253..5894460 858..651 1040 100 Minus
3L 28103327 3L 5894516..5894661 651..506 730 100 Minus
3L 28103327 3L 5895435..5895538 104..1 520 100 Minus
3L 28103327 3L 5895257..5895355 203..105 495 100 Minus
Blast to na_te.dros performed on 2019-03-16 23:56:00 has no hits.

GH11174.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:57:12 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 5894362..5894667 201..506 100 <- Minus
chr3L 5893401..5893665 859..1123 99 <- Minus
chr3L 5893719..5893926 651..858 100 <- Minus
chr3L 5893983..5894126 507..650 100 <- Minus
chr3L 5894726..5894821 105..200 100 <- Minus
chr3L 5894901..5895004 1..104 94   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:35:01 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
CG32412-RA 1..1023 18..1040 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:27:34 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
CG32412-RA 1..1023 18..1040 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:54:04 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
QC-RA 1..1023 18..1040 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:18:06 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
CG32412-RA 1..1023 18..1040 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:04:15 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
QC-RA 1..1023 18..1040 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:56:17 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
CG32412-RA 11..1133 1..1123 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:27:34 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
CG32412-RA 13..1135 1..1123 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:54:04 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
QC-RA 19..1141 1..1123 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:18:06 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
CG32412-RA 11..1133 1..1123 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:04:15 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
QC-RA 19..1141 1..1123 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:57:12 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5900835..5901099 859..1123 100 <- Minus
3L 5901153..5901360 651..858 100 <- Minus
3L 5901417..5901560 507..650 100 <- Minus
3L 5901796..5902101 201..506 100 <- Minus
3L 5902160..5902255 105..200 100 <- Minus
3L 5902335..5902438 1..104 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:57:12 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5900835..5901099 859..1123 100 <- Minus
3L 5901153..5901360 651..858 100 <- Minus
3L 5901417..5901560 507..650 100 <- Minus
3L 5901796..5902101 201..506 100 <- Minus
3L 5902160..5902255 105..200 100 <- Minus
3L 5902335..5902438 1..104 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:57:12 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5900835..5901099 859..1123 100 <- Minus
3L 5901153..5901360 651..858 100 <- Minus
3L 5901417..5901560 507..650 100 <- Minus
3L 5901796..5902101 201..506 100 <- Minus
3L 5902160..5902255 105..200 100 <- Minus
3L 5902335..5902438 1..104 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:54:04 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5894896..5895201 201..506 100 <- Minus
arm_3L 5895260..5895355 105..200 100 <- Minus
arm_3L 5893935..5894199 859..1123 100 <- Minus
arm_3L 5894253..5894460 651..858 100 <- Minus
arm_3L 5894517..5894660 507..650 100 <- Minus
arm_3L 5895435..5895538 1..104 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:51:25 Download gff for GH11174.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5895435..5895538 1..104 100   Minus
3L 5895260..5895355 105..200 100 <- Minus
3L 5893935..5894199 859..1123 100 <- Minus
3L 5894896..5895201 201..506 100 <- Minus
3L 5894517..5894660 507..650 100 <- Minus
3L 5894253..5894460 651..858 100 <- Minus

GH11174.pep Sequence

Translation from 17 to 1039

> GH11174.pep
MAIGSVVFAAAGLLLLLLPPSHQQATAGNIGSQWRDDEVHFNRTLDSILV
PRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGT
INPQAQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYL
QKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKLASKRSGSQ
AQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRT
AGQLEGNNNMFLSRVSGGLVDDDHRPFLDENVPVLHLVATPFPDVWHTPR
DNAANLHWPSIRNFNRVFRNFVYQYLKRHTSPVNLRFYRT*

GH11174.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:36:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10438-PA 356 GF10438-PA 19..321 13..311 1364 84.8 Plus
Dana\GF10348-PA 357 GF10348-PA 59..346 37..326 582 40.2 Plus
Dana\GF24557-PA 349 GF24557-PA 42..310 41..326 506 38.1 Plus
Dana\GF10436-PA 317 GF10436-PA 12..291 33..327 501 39.1 Plus
Dana\GF10437-PA 327 GF10437-PA 8..307 6..323 486 35.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:36:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14104-PA 344 GG14104-PA 1..344 1..340 1699 94.5 Plus
Dere\GG16120-PA 390 GG16120-PA 97..384 37..326 664 44.5 Plus
Dere\GG13925-PA 341 GG13925-PA 59..331 37..326 607 45.9 Plus
Dere\GG14103-PA 268 GG14103-PA 13..200 33..272 283 32.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:36:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16891-PA 314 GH16891-PA 2..313 32..339 1371 79.8 Plus
Dgri\GH14553-PA 362 GH14553-PA 61..348 37..326 646 44.4 Plus
Dgri\GH16890-PA 267 GH16890-PA 8..265 6..280 472 39.4 Plus
Dgri\GH16886-PA 175 GH16886-PA 1..150 101..261 301 41 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:00
Subject Length Description Subject Range Query Range Score Percent Strand
QC-PA 340 CG32412-PA 1..340 1..340 1775 100 Plus
isoQC-PA 352 CG5976-PA 58..345 37..326 646 43.5 Plus
isoQC-PB 354 CG5976-PB 60..347 37..326 646 43.5 Plus
CG6168-PC 342 CG6168-PC 59..339 37..334 549 41.8 Plus
CG6168-PB 342 CG6168-PB 59..339 37..334 549 41.8 Plus
CG32413-PB 332 CG32413-PB 34..312 36..328 462 37.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:36:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12035-PA 205 GI12035-PA 1..202 138..337 801 71.8 Plus
Dmoj\GI13400-PA 378 GI13400-PA 83..370 37..326 629 44.2 Plus
Dmoj\GI12033-PA 273 GI12033-PA 34..270 35..287 467 41.2 Plus
Dmoj\GI12029-PA 234 GI12029-PA 6..233 36..280 374 37.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:36:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12792-PA 357 GL12792-PA 63..350 37..326 657 44.5 Plus
Dper\GL22833-PA 368 GL22833-PA 55..331 37..326 510 38.9 Plus
Dper\GL21387-PA 265 GL21387-PA 30..260 32..280 488 43.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:36:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16884-PA 357 GA16884-PA 40..357 27..340 1510 88.1 Plus
Dpse\GA19273-PA 357 GA19273-PA 63..350 37..326 651 44.2 Plus
Dpse\GA16885-PA 321 GA16885-PA 30..319 32..337 642 43.7 Plus
Dpse\GA19404-PA 364 GA19404-PA 55..331 37..326 518 38.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:36:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13888-PA 340 GM13888-PA 1..340 1..340 1774 98.2 Plus
Dsec\GM22298-PA 354 GM22298-PA 60..347 37..326 667 44.5 Plus
Dsec\GM24759-PA 225 GM24759-PA 4..201 92..306 428 44.7 Plus
Dsec\GM13887-PA 269 GM13887-PA 13..200 33..272 285 32.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:36:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13170-PA 340 GD13170-PA 1..340 1..340 1785 98.8 Plus
Dsim\GD14891-PA 391 GD14891-PA 97..384 37..326 670 44.2 Plus
Dsim\GD12810-PA 343 GD12810-PA 42..339 24..334 565 41 Plus
Dsim\GD13169-PA 275 GD13169-PA 13..273 33..338 411 33.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:36:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13305-PA 342 GJ13305-PA 29..341 31..339 1401 81.5 Plus
Dvir\GJ11525-PA 359 GJ11525-PA 64..352 37..326 646 43.9 Plus
Dvir\GJ13304-PA 330 GJ13304-PA 41..324 34..327 631 45 Plus
Dvir\GJ13298-PA 278 GJ13298-PA 4..277 36..326 542 42.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:36:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17529-PA 343 GK17529-PA 45..342 36..332 1253 77.5 Plus
Dwil\GK12295-PA 357 GK12295-PA 66..353 37..326 641 42.5 Plus
Dwil\GK19272-PA 228 GK19272-PA 2..193 111..327 185 30.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:36:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20526-PA 344 GE20526-PA 1..344 1..340 1744 95.9 Plus
Dyak\GE19688-PA 351 GE19688-PA 58..345 37..326 677 44.5 Plus
Dyak\GE20221-PA 344 GE20221-PA 59..340 37..334 520 39.9 Plus
Dyak\GE20525-PA 214 GE20525-PA 13..201 33..272 302 34.4 Plus

GH11174.hyp Sequence

Translation from 17 to 1039

> GH11174.hyp
MAIGSVVFAAAGLLLLLLPPSHQQATAGNIGSQWRDDEVHFNRTLDSILV
PRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGT
INPQAQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYL
QKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKLASKRSGSQ
AQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRT
AGQLEGNNNMFLSRVSGGLVDDDHRPFLDENVPVLHLVATPFPDVWHTPR
DNAANLHWPSIRNFNRVFRNFVYQYLKRHTSPVNLRFYRT*

GH11174.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
QC-PA 340 CG32412-PA 1..340 1..340 1775 100 Plus
isoQC-PA 352 CG5976-PA 58..345 37..326 646 43.5 Plus
isoQC-PB 354 CG5976-PB 60..347 37..326 646 43.5 Plus
CG6168-PC 342 CG6168-PC 59..339 37..334 549 41.8 Plus
CG6168-PB 342 CG6168-PB 59..339 37..334 549 41.8 Plus