BDGP Sequence Production Resources |
Search the DGRC for GH11210
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 112 |
Well: | 10 |
Vector: | pOT2 |
Associated Gene/Transcript | crc-RB |
Protein status: | GH11210.pep: gold |
Preliminary Size: | 2266 |
Sequenced Size: | 2250 |
Gene | Date | Evidence |
---|---|---|
CG8669 | 2001-01-01 | Release 2 assignment |
CG8669 | 2001-11-09 | Blastp of sequenced clone |
CG8669 | 2003-01-01 | Sim4 clustering to Release 3 |
crc | 2008-04-29 | Release 5.5 accounting |
crc | 2008-08-15 | Release 5.9 accounting |
crc | 2008-12-18 | 5.12 accounting |
2250 bp (2250 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069092
> GH11210.complete AGAATCTTTGCATTGAGCATTAAAGCGGATACCGCTTTCCCACTTTGTGA AGTTGGCTGGCAGCGAAGGCCATTCGCACCTCTAACTTAAGCCACAGGGG AAAACAAAACGGCTAGATTCCACTTGAGGTGATCATCGATTGGAAACTAT ATGTAGCCGAACCTCGGAAAATCTGCAGATTCACGGGACAATCGCGACCA CCTGAAAGTTCGAGTGCGGGCTCCAAGGACTTTGTTAGCATGATACCACA CTGTGGATACCGTTACATGTGGAACCGTGAAATTGTGATAAACTCGCAAA AGTTGGTTAAACGACGCTAAGCAGGAACTTCAGATTTTCAACCACGCCGA CCACTTTGCGGCAGCAGTTGAATCCTACGGACAGAAATCCAGCAACCGAA GGACAGACGCACAATAAAAACCAATCACTCAAATCCCTTCATGCAATTTA AAACTTTTAATACTTTTCATATACGTTTTACCACGTTTTTACCGTTTTTA CCACGTACCGTTTTTGTTTTTTATTTAATAAGAAAATGTGGTGAACTTAT ACCAGCCTAACCTACCCATTTTCCAGCTTTTTATTTGTACTTTCTAATTT GATTCTGTGATTTCTTACTTTCATTTGGAAATTTGATTATACATTACTGC TAATATTTTTTCTATCTTCATAATATAAGGAATTCTCCTTTTAAATAGCT ATTGTTTAAAACTCGATTATTGTTAGGTTTAGGTAAGTCTACTCATTTGG GGGTATATATATACCATTTACCGTCTTAATTTTTTTTTTTAATAAAAACT TGTGGGTTAACACTTAATATTCGACAAAACGATTCACTGCTGCCGCAAAA ATGAGCACCTATATATTTATGCAAGCATATGAATGTCTTTTGGACCAAAA GGCAACGTTGAACTGCATCGATTATGACAGTAACAGCTTTCAGCCGAACA TTAATGTTATAACTCAGGCCATAGTACCCGCAAACAAAGTACAATTCGGT GCATCTTCAGACGCTGCTTCGCTTCCTTCTGCCGCTGATTACCAGCTCAA TGATGGCCCATCCCTTATTCTACAGCAATTAACGCCGCCGCAGTCTCCGC CTCAATTCGATGCTTACAAACAGGCGGGCGATGCACAGCCAAAACCCGTG CTCGTAAAGGCCGAGCAAAAGGTGCAATGCTATACTCCTGATGTTACACA CGCAGCATCTGCCACGCCCTTTAACTTTACCAACTGGGTAGGCGGCAGCG AAATTGCCCGAGAGAACCAACTGGTCGATGATATCGTCAATATGCGTGCT AAGGAGCTCGAATTGTCCACGAACTGGCAGCAGCTCAATGAGGACTGCGA GTCTCAGGCGTCTTCATCTTTAGACAGCAGAAGCACAGGAAGCGGAGTGT GCAGCAGCATCGCCGACGCCGACGAGGACTGGGTTCCAGAGCTTATCAGC AGCTCCTCCTCGCCAGCTCCTACAACCATCGAGCAGTCTGCGTCCCAGCC AAAAAAGCGTACTCGCACTTACGGGCGCGGTGTAGAGGATCGAAAGATCA GGAAAAAGGAGCAGAACAAGAACGCTGCCACACGATATCGCCAGAAAAAG AAACTTGAAATGGAGAATGTGCTGGGCGAGGAGCATGTGCTGTCTAAAGA AAACGAGCAGCTTCGTCGCACTCTGCAGGAGCGGCACAACGAAATGCGCT ATCTGCGCCAGCTGATTCGAGAGTTCTACCATGAACGCAAGCGCTAGGCT TTATTTTCTTTGAAATCAATTTTATCGTCGTTTGCAAAGTTATTGTTATA GTTAAACCCAAGCCTCTTCCATAAACTAATTGTCATCATAATGTTTCAAT GTAATACTATCAATAACAATCTCCGGGTTGCCCAAAATCTACAAATCACC AAAGTACGCAGCCTGTCCTTTGTCCTACATTTTTGGCACTAATGACGAGT CTCTGAATTCGGAAATATTTGTTGCCAGTGGGGCCTAAAGGCGACCCCAT ATCCCAAGCAGCACGGTCCAATGTAAAAACACATTAATTGAAAAGCTCAT TGATTTGTTTTTCTGCAAATCGGACAGTGTTGCGGCTGCTGTGCTATTTC AAAAACACTTATATTTTTAATCTGGTAGCATCTCGAAAGATGTAGATTTA TTTTAATGTTTCATTATTTTTTTCATATTCAACATTGATCAGTAATAAAT CAAAGGGTTTTTAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cryptocephal-RB | 2800 | cryptocephal-RB | 527..2746 | 1..2220 | 11100 | 100 | Plus |
cryptocephal.s | 3189 | cryptocephal.s | 527..2746 | 1..2220 | 11100 | 100 | Plus |
cryptocephal-RA | 2193 | cryptocephal-RA | 657..1996 | 881..2220 | 6700 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 21316980..21318023 | 1174..2217 | 5175 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 21313154..21314034 | 1..881 | 4390 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 21316622..21316915 | 881..1174 | 1470 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21318484..21319530 | 1174..2220 | 5235 | 100 | Plus |
2L | 23513712 | 2L | 21314658..21315538 | 1..881 | 4405 | 100 | Plus |
2L | 23513712 | 2L | 21318126..21318419 | 881..1174 | 1470 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21318484..21319530 | 1174..2220 | 5235 | 100 | Plus |
2L | 23513712 | 2L | 21314658..21315538 | 1..881 | 4405 | 100 | Plus |
2L | 23513712 | 2L | 21318126..21318419 | 881..1174 | 1470 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 2458..2614 | 740..578 | 134 | 58.2 | Minus |
micropia | 5461 | micropia DMDM11 5461bp | 4724..4827 | 2202..2108 | 128 | 65.4 | Minus |
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 792..969 | 578..740 | 117 | 59.1 | Plus |
blood | 7410 | blood BLOOD 7410bp | 6833..7004 | 626..796 | 117 | 55.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 21313154..21314034 | 1..881 | 97 | -> | Plus |
chr2L | 21316623..21316915 | 882..1174 | 100 | -> | Plus |
chr2L | 21316981..21318023 | 1175..2217 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crc-RB | 1..897 | 851..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crc-RB | 1..897 | 851..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crc-RB | 1..897 | 851..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crc-RB | 1..897 | 851..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crc-RB | 1..897 | 851..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crc-RB | 293..2509 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crc-RB | 293..2509 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crc-RB | 299..2515 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crc-RB | 293..2509 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
crc-RB | 299..2515 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21314658..21315538 | 1..881 | 100 | -> | Plus |
2L | 21318127..21318419 | 882..1174 | 100 | -> | Plus |
2L | 21318485..21319527 | 1175..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21314658..21315538 | 1..881 | 100 | -> | Plus |
2L | 21318127..21318419 | 882..1174 | 100 | -> | Plus |
2L | 21318485..21319527 | 1175..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21314658..21315538 | 1..881 | 100 | -> | Plus |
2L | 21318127..21318419 | 882..1174 | 100 | -> | Plus |
2L | 21318485..21319527 | 1175..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 21314658..21315538 | 1..881 | 100 | -> | Plus |
arm_2L | 21318127..21318419 | 882..1174 | 100 | -> | Plus |
arm_2L | 21318485..21319527 | 1175..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21314658..21315538 | 1..881 | 100 | -> | Plus |
2L | 21318127..21318419 | 882..1174 | 100 | -> | Plus |
2L | 21318485..21319527 | 1175..2217 | 100 | Plus |
Translation from 850 to 1746
> GH11210.pep MSTYIFMQAYECLLDQKATLNCIDYDSNSFQPNINVITQAIVPANKVQFG ASSDAASLPSAADYQLNDGPSLILQQLTPPQSPPQFDAYKQAGDAQPKPV LVKAEQKVQCYTPDVTHAASATPFNFTNWVGGSEIARENQLVDDIVNMRA KELELSTNWQQLNEDCESQASSSLDSRSTGSGVCSSIADADEDWVPELIS SSSSPAPTTIEQSASQPKKRTRTYGRGVEDRKIRKKEQNKNAATRYRQKK KLEMENVLGEEHVLSKENEQLRRTLQERHNEMRYLRQLIREFYHERKR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14324-PA | 296 | GF14324-PA | 1..296 | 1..298 | 908 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21297-PA | 292 | GG21297-PA | 1..292 | 1..298 | 1372 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13312-PA | 319 | GH13312-PA | 1..313 | 1..297 | 693 | 55.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
crc-PB | 298 | CG8669-PB | 1..298 | 1..298 | 1539 | 100 | Plus |
crc-PF | 372 | CG8669-PF | 85..372 | 11..298 | 1487 | 100 | Plus |
crc-PE | 381 | CG8669-PE | 94..381 | 11..298 | 1487 | 100 | Plus |
crc-PA | 381 | CG8669-PA | 94..381 | 11..298 | 1487 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12209-PA | 299 | GI12209-PA | 1..299 | 1..298 | 711 | 55.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26659-PA | 308 | GL26659-PA | 1..308 | 1..298 | 850 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA29007-PA | 308 | GA29007-PA | 1..308 | 1..298 | 850 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16908-PA | 259 | GM16908-PA | 3..259 | 42..298 | 1230 | 91.1 | Plus |
Dsec\GM23408-PA | 363 | GM23408-PA | 75..363 | 1..298 | 1229 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24317-PA | 299 | GD24317-PA | 1..299 | 1..298 | 1457 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17848-PA | 310 | GJ17848-PA | 1..310 | 1..298 | 734 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18737-PA | 302 | GK18737-PA | 1..301 | 1..297 | 837 | 57.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12912-PA | 381 | GE12912-PA | 83..381 | 1..298 | 1335 | 84.6 | Plus |
Translation from 850 to 1746
> GH11210.hyp MSTYIFMQAYECLLDQKATLNCIDYDSNSFQPNINVITQAIVPANKVQFG ASSDAASLPSAADYQLNDGPSLILQQLTPPQSPPQFDAYKQAGDAQPKPV LVKAEQKVQCYTPDVTHAASATPFNFTNWVGGSEIARENQLVDDIVNMRA KELELSTNWQQLNEDCESQASSSLDSRSTGSGVCSSIADADEDWVPELIS SSSSPAPTTIEQSASQPKKRTRTYGRGVEDRKIRKKEQNKNAATRYRQKK KLEMENVLGEEHVLSKENEQLRRTLQERHNEMRYLRQLIREFYHERKR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
crc-PB | 298 | CG8669-PB | 1..298 | 1..298 | 1539 | 100 | Plus |
crc-PF | 372 | CG8669-PF | 85..372 | 11..298 | 1487 | 100 | Plus |
crc-PE | 381 | CG8669-PE | 94..381 | 11..298 | 1487 | 100 | Plus |
crc-PA | 381 | CG8669-PA | 94..381 | 11..298 | 1487 | 100 | Plus |