Clone GH11271 Report

Search the DGRC for GH11271

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:112
Well:71
Vector:pOT2
Associated Gene/TranscriptCG11961-RB
Protein status:GH11271.pep: gold
Sequenced Size:2777

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11961 2002-11-11 Blastp of sequenced clone
CG11961 2003-01-01 Sim4 clustering to Release 3
CG11961 2008-04-29 Release 5.5 accounting
CG11961 2008-08-15 Release 5.9 accounting
CG11961 2008-12-18 5.12 accounting

Clone Sequence Records

GH11271.complete Sequence

2777 bp (2777 high quality bases) assembled on 2002-11-11

GenBank Submission: BT001412

> GH11271.complete
AAACTCGGAGCGGCAAAAACAACAAGGCCGGTTTCGCTACAATATAGATA
CGGGAAGAAGAAGAGCGCCTCGGAATGAGCAGCGAAACGGAGGAGAAAAG
ATCGAAGGCTCAGCCCAATGGCTGTGAGCGAGCATTCGTCCAGGGAAACA
AGATTAAGTGGTTCTGGGCACCCGCCTTCTTTGGATTCTGGCTGCTGCTC
TATGTGACCATCTCGATACCCGCCTGCCACCGCCTTCCCCGCCCACTGAC
CATTCAGGATGAGGAAACGCATCCCGACCAGTTCATCGCCGAGCGCGCAG
AGAAAAATCTACGGGAGCTAGTGAGCCTGGGACCCCGAGTGGTGGGCAGT
CGACAGAATGAGATGGCCGCTTTGAAGATGCTCTCCCAGAAGATGCAAAA
AATTCGATCCGGCACTGCCAACGATATTGAAGTGGATGTTCAGGTGGCAT
CCGGTAGCTATGTTCACTGGTCCATGGTCAATATGTACCAGAGCATTCAG
AATATTGTCGTTAAGATCAGTCCCAAGAACACGAACAGCACTACTTATCT
TCTGGTAAACAGTCACTATGATTCCGTGCCGGCGGGACCTGGTGCTGGTG
ATGATGGTTCCATGGTGGCCACTATGATGGAGGTACTCCGTGTGCTGGCC
AAGTCCGATAAGCCACTAAAGAACCCTGTGGTATTCCTGTTCAATGGTGC
CGAGGAAAATCCCCTTCAGGCCTCGCATGCCTTCATCACCCAGCACAAGT
GGGCCAAATATTGCAAAGCCCTTATCAATCTCGATTCCTGCGGAAATGGC
GGTCGAGAGATCCTCTTCCAATCGGGACCCAATCATCCCTGGCTAATGAA
GAACTACCGACGTGCCATCAAGCACCCGTATGCTTCTACAATGGGCGAGG
AGCTGTTCCAGCACAATTTCATTCCCTCTGACACGGACTTCCGCATTTTC
CGTGACCATGGATCGGTTCCCGGCTTGGATATGGCCTACACCTACAACGG
ATTTGTCTACCACACGCGACACGACAAGGCAGAGATCTTTCCCAGGGGTA
GTTTCCAGCATACTGGCGATAATCTGCTTGCTTTGGTCCGACAGATTGCA
AACTCTCCGGAGATTGAGAATTCAGCGAAATACGCCAAAGGTCACACCAT
CTATTTCGATGTTATGGGTTGGTTTCTGGTTTTCTACACCGAAACCGAAG
GCGTTATCTTGAACGTCATCGTCTCCTTGGTATCCATCGGGATTTGTGGC
TACGCTTTTAAGCTGATGTCGGTCAACTCGGGCATAAAGCTCGAAAAGAT
CCTCAAGAAGGTGGGGCACACACTCCTCGTACAGATTCTATCTGTTGTTG
TGGGAGCCATCCTGCCAGTTTTGCTCGGTCTGTTCATGGATGCGGTGCAT
TTGCCTCTGTCGTGGTTCTCGAACTCCTGGCTCATCCTGGGTCTCTACTT
CACCACTTTCTTCTTCGGTTTGGCCATAGTGCCTGCCTTGTACTTCCACT
GGACCAAGCGTGATAAGCTTCCCATTGGTCAGCGGGTTCAGCTTTTGCTG
CACTGCCACTGCCTACTTTTATCTGTTCTCACCCTGATCTTCACCATCTG
TGGAATTCGCTCTGTTTTTGTTTTGATGCTCAGTTGCTTGTTCTATACAG
TGGGCTTGATCATTAATATTGCCACCAAACTGCACACCAAAGATGTCGCA
TGGGTCATTCCGCACATTGTTTGCACTGTGCCACCATTTGTATTCTTTGC
ATATTTCTCGCACGGATTCTTCACCACGTTCATTCCAATGTTTGGTCGTT
TTGGAGAGAACCTTAATCCGGATTTGGCGGTGGCTGTTTTCAGTGTCGCT
GTGGGCTTCCTCTGCTGCGGTTTCATTATCCCTGTTCTGCAGTTGTTCAA
CAAATCGAAGACCATCATCTGCGGCCTGATGGGCATCACGTTATTGTGCT
TCATTATTGCAATGACACCAATTGGATTCCCCTATCGCCCAGAAACGAAT
GTCCAGCGTTTCGCTGTCCTGCACACCAAGCGTACCTTCCACGACGCTCA
AAACAAAGTGCGCCGTCAGGAATCTGGTTACTTCATTATGCCCCAGGACA
GACGCACTTACACCGTGAAAAATGCTGTTATCAACATGACACTGGCCCAA
AGAATTGGATCCGATTGCGATAAGGAAATTAATTGCGGATTGCCCCTATA
TAATCAGCGTTGGCACAAGACCAGAAAGAACAGTTTATGGATACCCGCAT
CGGAACCTGTTCTTGGCGAGAATGTGCCAACCGTTTTATTGCTCTCCAAG
AATACAGTGTCGCCCACCAAAATTCGCTATGAAATGCAGCTAAGTGGACC
CAATCACATGGCCCTCTTTATACAGCCCTTGAACGGAGCAAAGATGATGG
ACTGGTCCTTCCATCAGGCACCCTTACGTCTGAGCTTTGAGCCACCTTAC
TTCATCTACTTCTCGTGGGGTGTCAATGGAGATCCACTTAAATTCTGGCT
AGAACTAGAGAAACCCAACGGAAATTGGAACTCTTCTACTCTGGAACTTG
GGCTCGGAGGCCATTGGAACCATCACAAGGAACTAATAACGCCTGACTTT
AAGAAGTTCCTCGACAGTTTCCCCCATTATGTGGATGCCACACCCTGGCC
AGCTTCATTCGAGAGCCGGATCTTCTAGAGAAGCTATCTAATGTATACAT
TTTTGTACCTTCGTAAAATAAATATCGTAAGAACTTTGTTCTTGAGATAT
GAAAAACCAAAAAAAAAAAAAAAAAAA

GH11271.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:34:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG11961.d 3702 CG11961.d 251..3009 1..2759 13795 100 Plus
CG11961.b 3372 CG11961.b 251..3009 1..2759 13795 100 Plus
CG11961-RB 3091 CG11961-RB 251..3009 1..2759 13795 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 15246323..15246983 106..766 3260 99.5 Plus
chr2R 21145070 chr2R 15247469..15247854 1127..1512 1915 99.7 Plus
chr2R 21145070 chr2R 15247048..15247408 767..1127 1760 99.2 Plus
chr2R 21145070 chr2R 15248150..15248480 1691..2021 1610 99.1 Plus
chr2R 21145070 chr2R 15249263..15249512 2509..2758 1250 100 Plus
chr2R 21145070 chr2R 15248860..15249055 2223..2418 935 98.5 Plus
chr2R 21145070 chr2R 15247908..15248088 1512..1692 830 97.2 Plus
chr2R 21145070 chr2R 15244877..15244984 1..108 540 100 Plus
chr2R 21145070 chr2R 15248537..15248637 2021..2121 490 99 Plus
chr2R 21145070 chr2R 15248697..15248799 2122..2224 470 97.1 Plus
chr2R 21145070 chr2R 15249108..15249203 2415..2510 465 99 Plus
chr2R 21145070 chr2R 15264564..15264847 474..757 325 74.3 Plus
chr2R 21145070 chr2R 15269320..15269628 458..766 300 73.1 Plus
chr2R 21145070 chr2R 15257356..15257438 503..421 235 85.5 Minus
chr2R 21145070 chr2R 8243723..8243789 688..754 230 89.6 Plus
chr2R 21145070 chr2R 15252335..15252425 896..986 215 82.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:44:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19359184..19359844 106..766 3305 100 Plus
2R 25286936 2R 19360328..19360713 1127..1512 1930 100 Plus
2R 25286936 2R 19359909..19360269 767..1127 1805 100 Plus
2R 25286936 2R 19361009..19361339 1691..2021 1655 100 Plus
2R 25286936 2R 19362122..19362372 2509..2759 1255 100 Plus
2R 25286936 2R 19361719..19361914 2223..2418 980 100 Plus
2R 25286936 2R 19360767..19360947 1512..1692 905 100 Plus
2R 25286936 2R 19357732..19357839 1..108 540 100 Plus
2R 25286936 2R 19361556..19361658 2122..2224 515 100 Plus
2R 25286936 2R 19361396..19361496 2021..2121 505 100 Plus
2R 25286936 2R 19361967..19362062 2415..2510 480 100 Plus
2R 25286936 2R 19377395..19377678 474..757 325 74.3 Plus
2R 25286936 2R 19382142..19382450 458..766 255 72.2 Plus
2R 25286936 2R 19370207..19370289 503..421 235 85.5 Minus
2R 25286936 2R 12356466..12356532 688..754 230 89.6 Plus
2R 25286936 2R 19365185..19365275 896..986 215 82.4 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:09:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 19360383..19361043 106..766 3305 100 Plus
2R 25260384 2R 19361527..19361912 1127..1512 1930 100 Plus
2R 25260384 2R 19361108..19361468 767..1127 1805 100 Plus
2R 25260384 2R 19362208..19362538 1691..2021 1655 100 Plus
2R 25260384 2R 19363321..19363571 2509..2759 1255 100 Plus
2R 25260384 2R 19362918..19363113 2223..2418 980 100 Plus
2R 25260384 2R 19361966..19362146 1512..1692 905 100 Plus
2R 25260384 2R 19358931..19359038 1..108 540 100 Plus
2R 25260384 2R 19362755..19362857 2122..2224 515 100 Plus
2R 25260384 2R 19362595..19362695 2021..2121 505 100 Plus
2R 25260384 2R 19363166..19363261 2415..2510 480 100 Plus
2R 25260384 2R 19383341..19383458 458..575 245 80.5 Plus
2R 25260384 2R 19371406..19371488 503..421 235 85.5 Minus
2R 25260384 2R 12357665..12357731 688..754 230 89.5 Plus
2R 25260384 2R 19366384..19366474 896..986 215 82.4 Plus
2R 25260384 2R 19378807..19378877 687..757 205 85.9 Plus
2R 25260384 2R 19379112..19379207 921..1016 180 79.1 Plus
2R 25260384 2R 19378665..19378772 545..652 165 76.8 Plus
2R 25260384 2R 12361446..12361516 684..754 160 81.6 Plus
2R 25260384 2R 12369537..12369613 775..851 145 79.2 Plus
2R 25260384 2R 19371167..19371228 742..681 145 82.2 Minus
Blast to na_te.dros performed on 2019-03-16 23:57:57 has no hits.

GH11271.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:59:04 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 15244877..15244983 1..107 100 -> Plus
chr2R 15246325..15246983 108..766 99 -> Plus
chr2R 15247048..15247408 767..1127 99 -> Plus
chr2R 15247470..15247853 1128..1511 99 -> Plus
chr2R 15247908..15248088 1512..1692 97 -> Plus
chr2R 15248152..15248480 1693..2021 99 -> Plus
chr2R 15248538..15248637 2022..2121 99 -> Plus
chr2R 15248697..15248799 2122..2224 97 -> Plus
chr2R 15248862..15249054 2225..2417 98 -> Plus
chr2R 15249111..15249203 2418..2510 98 -> Plus
chr2R 15249265..15249512 2511..2758 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:35:10 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
CG11961-RB 1..2604 75..2678 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:06:23 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
CG11961-RB 1..2604 75..2678 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:54:40 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
CG11961-RB 1..2604 75..2678 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:56:14 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
CG11961-RB 1..2604 75..2678 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:05:39 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
CG11961-RB 1..2604 75..2678 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:26:01 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
CG11961-RB 2..2759 1..2758 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:06:23 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
CG11961-RB 2..2759 1..2758 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:54:40 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
CG11961-RB 201..2958 1..2758 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:56:15 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
CG11961-RB 2..2759 1..2758 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:05:39 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
CG11961-RB 201..2958 1..2758 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:59:04 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19361970..19362062 2418..2510 100 -> Plus
2R 19362124..19362371 2511..2758 100   Plus
2R 19361011..19361339 1693..2021 100 -> Plus
2R 19361397..19361496 2022..2121 100 -> Plus
2R 19361556..19361658 2122..2224 100 -> Plus
2R 19357732..19357838 1..107 100 -> Plus
2R 19359186..19359844 108..766 100 -> Plus
2R 19359909..19360269 767..1127 100 -> Plus
2R 19360329..19360712 1128..1511 100 -> Plus
2R 19360767..19360947 1512..1692 100 -> Plus
2R 19361721..19361913 2225..2417 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:59:04 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19361970..19362062 2418..2510 100 -> Plus
2R 19362124..19362371 2511..2758 100   Plus
2R 19361011..19361339 1693..2021 100 -> Plus
2R 19361397..19361496 2022..2121 100 -> Plus
2R 19361556..19361658 2122..2224 100 -> Plus
2R 19357732..19357838 1..107 100 -> Plus
2R 19359186..19359844 108..766 100 -> Plus
2R 19359909..19360269 767..1127 100 -> Plus
2R 19360329..19360712 1128..1511 100 -> Plus
2R 19360767..19360947 1512..1692 100 -> Plus
2R 19361721..19361913 2225..2417 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:59:04 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19361970..19362062 2418..2510 100 -> Plus
2R 19362124..19362371 2511..2758 100   Plus
2R 19361011..19361339 1693..2021 100 -> Plus
2R 19361397..19361496 2022..2121 100 -> Plus
2R 19361556..19361658 2122..2224 100 -> Plus
2R 19357732..19357838 1..107 100 -> Plus
2R 19359186..19359844 108..766 100 -> Plus
2R 19359909..19360269 767..1127 100 -> Plus
2R 19360329..19360712 1128..1511 100 -> Plus
2R 19360767..19360947 1512..1692 100 -> Plus
2R 19361721..19361913 2225..2417 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:54:40 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15249629..15249876 2511..2758 100   Plus
arm_2R 15245237..15245343 1..107 100 -> Plus
arm_2R 15246691..15247349 108..766 100 -> Plus
arm_2R 15247414..15247774 767..1127 100 -> Plus
arm_2R 15247834..15248217 1128..1511 100 -> Plus
arm_2R 15248272..15248452 1512..1692 100 -> Plus
arm_2R 15248516..15248844 1693..2021 100 -> Plus
arm_2R 15248902..15249001 2022..2121 100 -> Plus
arm_2R 15249061..15249163 2122..2224 100 -> Plus
arm_2R 15249226..15249418 2225..2417 100 -> Plus
arm_2R 15249475..15249567 2418..2510 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:28:41 Download gff for GH11271.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19363323..19363570 2511..2758 100   Plus
2R 19360385..19361043 108..766 100 -> Plus
2R 19361108..19361468 767..1127 100 -> Plus
2R 19361528..19361911 1128..1511 100 -> Plus
2R 19361966..19362146 1512..1692 100 -> Plus
2R 19362210..19362538 1693..2021 100 -> Plus
2R 19362596..19362695 2022..2121 100 -> Plus
2R 19362755..19362857 2122..2224 100 -> Plus
2R 19362920..19363112 2225..2417 100 -> Plus
2R 19363169..19363261 2418..2510 100 -> Plus
2R 19358931..19359037 1..107 100 -> Plus

GH11271.pep Sequence

Translation from 74 to 2677

> GH11271.pep
MSSETEEKRSKAQPNGCERAFVQGNKIKWFWAPAFFGFWLLLYVTISIPA
CHRLPRPLTIQDEETHPDQFIAERAEKNLRELVSLGPRVVGSRQNEMAAL
KMLSQKMQKIRSGTANDIEVDVQVASGSYVHWSMVNMYQSIQNIVVKISP
KNTNSTTYLLVNSHYDSVPAGPGAGDDGSMVATMMEVLRVLAKSDKPLKN
PVVFLFNGAEENPLQASHAFITQHKWAKYCKALINLDSCGNGGREILFQS
GPNHPWLMKNYRRAIKHPYASTMGEELFQHNFIPSDTDFRIFRDHGSVPG
LDMAYTYNGFVYHTRHDKAEIFPRGSFQHTGDNLLALVRQIANSPEIENS
AKYAKGHTIYFDVMGWFLVFYTETEGVILNVIVSLVSIGICGYAFKLMSV
NSGIKLEKILKKVGHTLLVQILSVVVGAILPVLLGLFMDAVHLPLSWFSN
SWLILGLYFTTFFFGLAIVPALYFHWTKRDKLPIGQRVQLLLHCHCLLLS
VLTLIFTICGIRSVFVLMLSCLFYTVGLIINIATKLHTKDVAWVIPHIVC
TVPPFVFFAYFSHGFFTTFIPMFGRFGENLNPDLAVAVFSVAVGFLCCGF
IIPVLQLFNKSKTIICGLMGITLLCFIIAMTPIGFPYRPETNVQRFAVLH
TKRTFHDAQNKVRRQESGYFIMPQDRRTYTVKNAVINMTLAQRIGSDCDK
EINCGLPLYNQRWHKTRKNSLWIPASEPVLGENVPTVLLLSKNTVSPTKI
RYEMQLSGPNHMALFIQPLNGAKMMDWSFHQAPLRLSFEPPYFIYFSWGV
NGDPLKFWLELEKPNGNWNSSTLELGLGGHWNHHKELITPDFKKFLDSFP
HYVDATPWPASFESRIF*

GH11271.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:40:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12330-PA 891 GF12330-PA 30..891 6..867 4120 87.2 Plus
Dana\GF12612-PA 861 GF12612-PA 15..858 25..864 2224 48.9 Plus
Dana\GF12333-PA 862 GF12333-PA 18..862 26..867 2218 48 Plus
Dana\GF12849-PA 931 GF12849-PA 31..931 1..867 1875 39.6 Plus
Dana\GF12332-PA 866 GF12332-PA 18..863 23..864 1851 40.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:40:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21963-PA 867 GG21963-PA 1..867 1..867 4461 96.1 Plus
Dere\GG21965-PA 872 GG21965-PA 28..872 26..867 2325 49.2 Plus
Dere\GG20912-PA 854 GG20912-PA 8..851 25..864 2227 49.4 Plus
Dere\GG20280-PA 875 GG20280-PA 3..875 2..867 1851 41.2 Plus
Dere\GG21966-PA 873 GG21966-PA 8..873 1..867 1794 40.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 07:40:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20679-PA 891 GH20679-PA 33..888 10..864 3410 72.2 Plus
Dgri\GH20682-PA 862 GH20682-PA 18..862 26..867 2300 48.3 Plus
Dgri\GH21200-PA 882 GH21200-PA 36..879 25..864 2156 47.1 Plus
Dgri\GH20689-PA 879 GH20689-PA 31..879 25..867 1963 41.7 Plus
Dgri\GH20688-PA 859 GH20688-PA 11..859 26..867 1926 43.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG11961-PB 867 CG11961-PB 1..867 1..867 4633 100 Plus
CG11961-PC 891 CG11961-PC 35..891 11..867 4582 99.9 Plus
CG11961-PA 891 CG11961-PA 35..891 11..867 4582 99.9 Plus
CG10062-PA 862 CG10062-PA 18..862 26..867 2266 49.1 Plus
CG10062-PC 868 CG10062-PC 18..868 26..867 2249 48.7 Plus
CG9416-PB 861 CG9416-PB 15..858 25..864 2211 49.3 Plus
CG9416-PA 861 CG9416-PA 15..858 25..864 2211 49.3 Plus
CG10062-PD 819 CG10062-PD 2..819 52..867 2163 48.9 Plus
CG30047-PA 879 CG30047-PA 30..879 25..867 1905 41.3 Plus
CG33012-PC 912 CG33012-PC 62..912 26..867 1855 40.7 Plus
CG10051-PA 866 CG10051-PA 21..865 26..866 1837 41.9 Plus
CG30043-PA 878 CG30043-PA 2..878 6..867 1796 40.8 Plus
CG30049-PA 878 CG30049-PA 30..878 26..867 1776 39.9 Plus
CG13160-PB 875 CG13160-PB 26..875 22..867 1766 40.3 Plus
CG13160-PA 874 CG13160-PA 25..874 22..867 1766 40.3 Plus
CG10073-PC 881 CG10073-PC 44..881 29..867 1738 41.4 Plus
CG10073-PA 873 CG10073-PA 36..873 29..867 1738 41.4 Plus
CG10081-PA 875 CG10081-PA 33..875 26..867 1686 38.4 Plus
CG10081-PB 873 CG10081-PB 33..873 26..867 1667 38.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 07:40:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19043-PA 892 GI19043-PA 34..892 10..867 3406 71.4 Plus
Dmoj\GI19045-PA 862 GI19045-PA 17..862 25..867 2234 48.2 Plus
Dmoj\GI20486-PA 861 GI20486-PA 15..858 25..864 2185 47.7 Plus
Dmoj\GI19044-PA 865 GI19044-PA 18..865 23..867 1864 42.2 Plus
Dmoj\GI18384-PA 875 GI18384-PA 21..875 18..867 1805 41.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:40:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11616-PA 894 GL11616-PA 39..894 13..867 3800 80.6 Plus
Dper\GL11618-PA 862 GL11618-PA 18..862 26..867 2291 48.2 Plus
Dper\GL10445-PA 861 GL10445-PA 15..858 25..864 2199 47.7 Plus
Dper\GL11623-PA 881 GL11623-PA 32..881 25..867 1953 42.5 Plus
Dper\GL11625-PA 879 GL11625-PA 10..879 2..867 1906 41.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:40:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11297-PA 894 GA11297-PA 39..894 13..867 3798 80.6 Plus
Dpse\GA24794-PA 862 GA24794-PA 18..862 26..867 2287 48.2 Plus
Dpse\GA21772-PA 861 GA21772-PA 15..858 25..864 2206 47.8 Plus
Dpse\GA15604-PA 881 GA15604-PA 32..881 25..867 1967 42.8 Plus
Dpse\GA15600-PA 879 GA15600-PA 10..879 2..867 1910 41.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:40:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21951-PA 885 GM21951-PA 31..885 7..867 4494 96.7 Plus
Dsec\GM21953-PA 862 GM21953-PA 18..862 26..867 2296 49.1 Plus
Dsec\GM19836-PA 854 GM19836-PA 8..851 25..864 2234 49.3 Plus
Dsec\GM21365-PA 878 GM21365-PA 27..878 22..867 1875 40.9 Plus
Dsec\GM21370-PA 927 GM21370-PA 22..927 2..867 1786 39.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 07:40:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11447-PA 867 GD11447-PA 1..867 1..867 4616 98.5 Plus
Dsim\GD11449-PA 862 GD11449-PA 18..862 26..867 2305 49.2 Plus
Dsim\GD25326-PA 856 GD25326-PA 8..853 25..864 2192 48.8 Plus
Dsim\GD10862-PA 879 GD10862-PA 27..879 22..867 1887 41.3 Plus
Dsim\GD10867-PA 909 GD10867-PA 58..909 25..867 1872 41 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:40:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20011-PA 892 GJ20011-PA 37..892 13..867 3517 72.6 Plus
Dvir\GJ22338-PA 883 GJ22338-PA 37..880 25..864 2183 48 Plus
Dvir\GJ20013-PA 865 GJ20013-PA 20..865 25..867 2180 48.5 Plus
Dvir\GJ20020-PA 885 GJ20020-PA 37..885 25..867 1971 42.3 Plus
Dvir\GJ20019-PA 879 GJ20019-PA 1..879 1..867 1898 41.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:40:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20842-PA 892 GK20842-PA 36..892 13..867 3630 76.2 Plus
Dwil\GK20844-PA 861 GK20844-PA 16..861 26..867 2225 48.8 Plus
Dwil\GK20800-PA 861 GK20800-PA 15..858 25..864 2225 49.1 Plus
Dwil\GK14799-PA 882 GK14799-PA 12..882 1..867 1829 40.4 Plus
Dwil\GK20845-PA 877 GK20845-PA 13..877 1..867 1826 41 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:40:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12041-PA 867 GE12041-PA 1..867 1..867 4580 97.5 Plus
Dyak\GE12043-PA 862 GE12043-PA 18..862 26..867 2302 49.3 Plus
Dyak\GE13851-PA 861 GE13851-PA 15..858 25..864 2230 49.2 Plus
Dyak\GE12443-PA 910 GE12443-PA 59..910 25..867 1874 41.7 Plus
Dyak\GE12439-PA 878 GE12439-PA 27..878 23..867 1858 41.4 Plus

GH11271.hyp Sequence

Translation from 74 to 2677

> GH11271.hyp
MSSETEEKRSKAQPNGCERAFVQGNKIKWFWAPAFFGFWLLLYVTISIPA
CHRLPRPLTIQDEETHPDQFIAERAEKNLRELVSLGPRVVGSRQNEMAAL
KMLSQKMQKIRSGTANDIEVDVQVASGSYVHWSMVNMYQSIQNIVVKISP
KNTNSTTYLLVNSHYDSVPAGPGAGDDGSMVATMMEVLRVLAKSDKPLKN
PVVFLFNGAEENPLQASHAFITQHKWAKYCKALINLDSCGNGGREILFQS
GPNHPWLMKNYRRAIKHPYASTMGEELFQHNFIPSDTDFRIFRDHGSVPG
LDMAYTYNGFVYHTRHDKAEIFPRGSFQHTGDNLLALVRQIANSPEIENS
AKYAKGHTIYFDVMGWFLVFYTETEGVILNVIVSLVSIGICGYAFKLMSV
NSGIKLEKILKKVGHTLLVQILSVVVGAILPVLLGLFMDAVHLPLSWFSN
SWLILGLYFTTFFFGLAIVPALYFHWTKRDKLPIGQRVQLLLHCHCLLLS
VLTLIFTICGIRSVFVLMLSCLFYTVGLIINIATKLHTKDVAWVIPHIVC
TVPPFVFFAYFSHGFFTTFIPMFGRFGENLNPDLAVAVFSVAVGFLCCGF
IIPVLQLFNKSKTIICGLMGITLLCFIIAMTPIGFPYRPETNVQRFAVLH
TKRTFHDAQNKVRRQESGYFIMPQDRRTYTVKNAVINMTLAQRIGSDCDK
EINCGLPLYNQRWHKTRKNSLWIPASEPVLGENVPTVLLLSKNTVSPTKI
RYEMQLSGPNHMALFIQPLNGAKMMDWSFHQAPLRLSFEPPYFIYFSWGV
NGDPLKFWLELEKPNGNWNSSTLELGLGGHWNHHKELITPDFKKFLDSFP
HYVDATPWPASFESRIF*

GH11271.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG11961-PB 867 CG11961-PB 1..867 1..867 4633 100 Plus
CG11961-PC 891 CG11961-PC 35..891 11..867 4582 99.9 Plus
CG11961-PA 891 CG11961-PA 35..891 11..867 4582 99.9 Plus
CG10062-PA 862 CG10062-PA 18..862 26..867 2266 49.1 Plus
CG10062-PC 868 CG10062-PC 18..868 26..867 2249 48.7 Plus