Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
GH11358.complete Sequence
1166 bp (1166 high quality bases) assembled on 2002-05-15
GenBank Submission: AY119501
> GH11358.complete
TTTACATCTGGTGATTATATTATAGTTTATTGTTTTACCGATTTTTTTTT
TTTAGTGGCCGCAACAACAGCTCCCTGTGATGCACCTGTCACACGGCCAA
CTGAAAGTGGTGCTCATTTTGGCCCTGCTGCAGGAGCTGCAGGTGAAGCC
GCAGCGAGAGGTGTTCCAGGAACTTTTCGAGAAGGATCTGCGCTTGTGTC
CAGACTGTTTCGTTGGACAGAGTGAGCCGTGCGGGGAAATCTTCCAGAAA
ATTGCAGAGCCCTCGGATTGGAGTAGACTTGTGAAAGCCATTTCGTTGCT
CGTTGATCGCCGAGCGATTTACTTTCTAAGGCTAAAAGACCGGGATCAGG
AAGTCCAGCTGGTGGCCAAAAGAAAAATCATTGATGCACAGAGTAATCAG
ATAAAAAATGTGAAAAAAGATTTCTATGAACTAGAGGAGCGACCTGGTGG
TTTTCATCTCTGCCGAACTCTGGCAAGGGAACCCCGCTTTGTTTCGTACT
TGGAGCAGCGTGGACATGCTGCCGCCAGTGTGTGGTTCTACATGATGTAC
TACGTTAGTCCGCTGCTTATGCAGGAACTGCATCTGCAGGGATTTCCAGT
GCCTACCACCTACGCCTCCTGCGGACTAACACATTTTCAATCCAATGCAG
GACGTACTTTAGCTCATTACGTCGATGCTGAAGAAGGTTTGCGTGTGGAG
CTGGCTCTCCAGTTGATCCAGCTCTCCCTCAAGCTGACTTTTGGATTCGC
GGACTTTCGCATTATCTTAACCGATTTCACGGCCGATAATTTGGCTTACG
ACGAAGACACCAAGAAGGTGTACCTCATTGATTTGGACTCCGTGGTCCTG
GTGGACGCTTCGTTCGCAGCAGGACATGCCGAAAAGTACGAGCCGCTGAC
CGGCGAGGGATTCACATTTGATGTCTCTGCATTCTGCTCCGGCCATCAGC
TGGATGCCAATATCTACCAGGCGTGCCTTTTGCTAAGGGATTACTTGCTT
AAGAATTTGGACAACGAAAAGCTGCAGCTGCTCCTGGAGCAGTGTGTAGC
ATGCCAAGATGACTTCTGTGATATGCGTTTCCAACATGCTTACGACCTAA
TAAAAGTGCTGGAAAGCAATAATTAAAGCCAATCGTTGGAGATCCACTAA
AAAAAAAAAAAAAAAA
GH11358.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:08:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11170-RB | 1302 | CG11170-RB | 107..1255 | 1..1149 | 5745 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:40:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 18063943..18065023 | 1148..68 | 5210 | 98.8 | Minus |
chr2R | 21145070 | chr2R | 18069289..18069358 | 70..1 | 350 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:44:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:40:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22177418..22178499 | 1149..68 | 5410 | 100 | Minus |
2R | 25286936 | 2R | 22182763..22182832 | 70..1 | 350 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:39:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 22178617..22179698 | 1149..68 | 5410 | 100 | Minus |
2R | 25260384 | 2R | 22183962..22184031 | 70..1 | 350 | 100 | Minus |
Blast to na_te.dros performed 2019-03-15 12:40:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Porto1 | 4682 | Porto1 DOC5 4682bp | 167..210 | 56..14 | 118 | 77.3 | Minus |
GH11358.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:41:57 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 18063943..18065020 | 71..1148 | 98 | <- | Minus |
chr2R | 18069289..18069358 | 1..70 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:35:24 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11170-RB | 1..1047 | 80..1126 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:51:49 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11170-RB | 1..1047 | 80..1126 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:48:10 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11170-RB | 1..1047 | 80..1126 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:44:25 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11170-RB | 1..1047 | 80..1126 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:07:13 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11170-RB | 1..1047 | 80..1126 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:29:47 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11170-RB | 1..1126 | 1..1126 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:51:49 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11170-RB | 1..1148 | 1..1148 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:48:10 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11170-RB | 48..1195 | 1..1148 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:44:25 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11170-RB | 1..1126 | 1..1126 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:07:13 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11170-RB | 48..1195 | 1..1148 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:41:57 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22177419..22178496 | 71..1148 | 100 | <- | Minus |
2R | 22182763..22182832 | 1..70 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:41:57 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22177419..22178496 | 71..1148 | 100 | <- | Minus |
2R | 22182763..22182832 | 1..70 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:41:57 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22177419..22178496 | 71..1148 | 100 | <- | Minus |
2R | 22182763..22182832 | 1..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:48:10 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18064924..18066001 | 71..1148 | 100 | <- | Minus |
arm_2R | 18070268..18070337 | 1..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:16:47 Download gff for
GH11358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22178618..22179695 | 71..1148 | 100 | <- | Minus |
2R | 22183962..22184031 | 1..70 | 100 | | Minus |
GH11358.pep Sequence
Translation from 79 to 1125
> GH11358.pep
MHLSHGQLKVVLILALLQELQVKPQREVFQELFEKDLRLCPDCFVGQSEP
CGEIFQKIAEPSDWSRLVKAISLLVDRRAIYFLRLKDRDQEVQLVAKRKI
IDAQSNQIKNVKKDFYELEERPGGFHLCRTLAREPRFVSYLEQRGHAAAS
VWFYMMYYVSPLLMQELHLQGFPVPTTYASCGLTHFQSNAGRTLAHYVDA
EEGLRVELALQLIQLSLKLTFGFADFRIILTDFTADNLAYDEDTKKVYLI
DLDSVVLVDASFAAGHAEKYEPLTGEGFTFDVSAFCSGHQLDANIYQACL
LLRDYLLKNLDNEKLQLLLEQCVACQDDFCDMRFQHAYDLIKVLESNN*
GH11358.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:50:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF13244-PA | 347 | GF13244-PA | 1..347 | 1..346 | 1242 | 66.3 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:50:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20713-PA | 346 | GG20713-PA | 1..345 | 1..347 | 1560 | 85.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11170-PD | 348 | CG11170-PD | 1..348 | 1..348 | 1807 | 100 | Plus |
CG11170-PC | 348 | CG11170-PC | 1..348 | 1..348 | 1807 | 100 | Plus |
CG11170-PB | 348 | CG11170-PB | 1..348 | 1..348 | 1807 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:50:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL11832-PA | 351 | GL11832-PA | 1..345 | 1..344 | 1247 | 66.7 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:50:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA10814-PB | 351 | GA10814-PB | 1..345 | 1..344 | 1244 | 66.7 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:50:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15658-PA | 350 | GM15658-PA | 1..350 | 1..348 | 1670 | 90.9 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:50:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK19336-PA | 345 | GK19336-PA | 1..340 | 1..348 | 766 | 50.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:50:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE11696-PA | 345 | GE11696-PA | 1..345 | 1..348 | 1592 | 86.5 | Plus |
GH11358.hyp Sequence
Translation from 79 to 1125
> GH11358.hyp
MHLSHGQLKVVLILALLQELQVKPQREVFQELFEKDLRLCPDCFVGQSEP
CGEIFQKIAEPSDWSRLVKAISLLVDRRAIYFLRLKDRDQEVQLVAKRKI
IDAQSNQIKNVKKDFYELEERPGGFHLCRTLAREPRFVSYLEQRGHAAAS
VWFYMMYYVSPLLMQELHLQGFPVPTTYASCGLTHFQSNAGRTLAHYVDA
EEGLRVELALQLIQLSLKLTFGFADFRIILTDFTADNLAYDEDTKKVYLI
DLDSVVLVDASFAAGHAEKYEPLTGEGFTFDVSAFCSGHQLDANIYQACL
LLRDYLLKNLDNEKLQLLLEQCVACQDDFCDMRFQHAYDLIKVLESNN*
GH11358.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:21:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11170-PD | 348 | CG11170-PD | 1..348 | 1..348 | 1807 | 100 | Plus |
CG11170-PC | 348 | CG11170-PC | 1..348 | 1..348 | 1807 | 100 | Plus |
CG11170-PB | 348 | CG11170-PB | 1..348 | 1..348 | 1807 | 100 | Plus |