![]() | BDGP Sequence Production Resources |
Search the DGRC for GH11415
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 114 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4766-RA |
Protein status: | GH11415.pep: gold |
Preliminary Size: | 2673 |
Sequenced Size: | 2691 |
Gene | Date | Evidence |
---|---|---|
CG4766 | 2000-02-14 | Blastp of sequenced clone |
CG4766 | 2001-01-01 | Release 2 assignment |
CG4766 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4766 | 2008-04-29 | Release 5.5 accounting |
CG4766 | 2008-08-15 | Release 5.9 accounting |
CG4766 | 2008-12-18 | 5.12 accounting |
2691 bp (2691 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145667
> GH11415.complete CCGAGATGGCGGATTTGTTAGATACTGGCATGGATATTGAGATACTTCGC TGCAGCCGGGCCAAACTGCACTTTCAGCGCTTTTTTTTTTATCTGCCCGA AGCTGTAAATATCCGCGAGATTTACAACGCCAGCCAGCCGCGACTTCGGT ATCGGTATCAGTATCGTTTGGCTGACTTCGATTCGTACTCGGAATCGGCA TCGGCATCGGCAGCGGCATCAGGCTGGGGGTATCGCTATTGAGCGCAGCG CATCATTCGGTCAGCAATTCGCCAATGCAGATACTGTATCTGCGGGCAGC AGCTACTAAAATTGAAGAGCCAAAAGCTAAAATACCCATATACATACTCG GTACACCGCGGTCATCGTCGTCGTCGTGCTCCACTTGTGCCCATTGTTGG TTCTGCTGTCACCGTAACTCACAATTGAATTGTTCCTTTGTTCTGTCCCG TCCAGAAGGAGACCCGCTGCCGAATTTCGCATAATTGGCTGGCTTTTAAG TTGGCCGCCAGACCAAGTGTCGCCGGTAAAAAGATACATCTACAGATAGA TCGTTGTACTTTTGGTACTTTTGGAGCTTGGTGGAACTCGAACTGAGTAC CATGCTGGTGCCGCCGGACATGATGGCCGCCCAGACGCGCATGGTCTATC AGATGAATCGATTCTGCACGGAGAGGGTTCAGGCCAGGATGTACAAGACG GCCACCGCCATCCGGGAGATCTGCAAGATCGTCCAGGACATCCTCAAAGA GGTGGAACTGCAGGAGCCGCGATTCATCTCCAGCCTCGTCGAGTGCAATG GCAGATTCGAGGGCGTTGAAGTGATATCCCCGAATGAATTCGAGATAGTG CTGTATCTGAATCAAATGGGTGTCTTCAATTTCGTGGACGATGGCACCTT GCCGGGATGTGCTGTTCTGAAGCTGAGCGATGGAAGGAAGCGGTCCATGT CCCTGTGGGTGGAGTTCATAACGGCCAGTGGTTATTTGTCCTCCCGGAAG ATCCGTGCCCGTTTCCAGACTCTGGTGGCCCAGGCGTGCGATAAAAGTGT CTACCGCGACATGGTCAAAATGGTGGGCGACACCAGCGAGGTGAAGTTGC GCATTCGGGAGCGATTCGTGGTCCAGATTACGCCGGCATTTAAGTGCTCA GGCATCTGGCCAAGATCGGCGGCCCACTGGCCGGTACCACATCTCCCGTG GCCACATCCCAACATCGTGGCGGAGGTCAAGACCGAGGGCTTCGATCTTC TGTCCAAGGAGAGCGTCATCATGCAGAACAAGAACAACAATGCCGCCAGC ATGGAGGGCGATGCCTGGGTGCTCAGCTTCTTCGAGGCCGAAAACCGTCT GCTGCAAGGTGGCTGTCGTCGACGTTGTCTGAGCATGCTGAAGACCCTGA GGGACAGGCATCTGGATTTACCAGGCAATCCCATCAGTGCGTATCACCTG AAGAACCTGCTGCTCTACGAGTGCGAGAAGCATCCGCGGGACTTTGAGTG GGACGAGGGCTGCATCGCTGACCGCATCAATGGGATATTCCTGCAGCTGA TATCCTGTCTGCAGTATCGCCGTTGTCCCCACTACTTCCTTCCCGCACTG GACATGTTCAAGGGTAAATCCCCCAGTGCTTTGGAGCAGGCGGCCAAGCA GGTGTGGCGCTTGACCCGCGAGCTCCTCACAAATGCCAACGCCTTTGAGA AGTTGTAAGGTGTCAGAGGTTAAAGGTCACGACTGGTCGATAATGGCGAT GACATTTTTGGCAGGAATTTATAATTATTAACCGCACTCATAGAGTGAAT ATTGTTCTTATTTTTTTACCCGTTAGATTAGATTCTTTTGCTCCATTCAC ATATTGTTGATTTGACTAACTTCTTCTTGCAGTCACGCAAATATCGACCC ATCCGAAGTCGGGGGAGTGCTGATGTGTATGAGGTGCCAGGCAAGTCGGA GATGAAAGGTACATATGCGAATAAATACATACGCATAAGCACAGCTCCTT GGCGGCCATTTTGTGCCATGTCTGTGTATATGTGACTGTCTGCGTGCGTG CGCGTGTGTGTGTGTGTGTGTGCGAAAGTGTTAATGCGAAGATGCGAGAT AAGTCCACTCCCCATTCGACTCGACTCGACTCGACTCAACTCGACTCGAT GCGATTCGAGATATATATCTGCCCATCCAAGCGATCCGGCTAAGCCTCGA ATATTGTTTTTAATAACTCGCCCCTCGACGCTCACGACACATCCTTTGTT TGGCCGGCGAACAATGGACTCGCCGGTTCGCAAGTCCGGATGGAAAAATC GAAAAATCGAGAGAATGAAAAAAGAGCATTTGTCCAGGCGGCTCCTTTTA CACGGTGGCTATACACACTCGACGTATACGATTGTTTCACAGTTCGCAGA TCCTAGATCAAAGCAAAACGAACATACAAAAAATATATAATATATACATA TAGCGCTAGAACAGAGGGAGATACAGATTCCATTGATCGTTCCAAGTCCA ACTTAACATTGTTTTACTACTTACATATACATATACACATATTTATGTAT GTCGATGTCTATTATGCGATGCCTAACATTTACCACGATTATCCGCAGTT TGTTTTAAGTACAACATAATCCTAGATTGCTAATGTAAAAAATGCTTGAA TAAATTCAAGGATAGCCAAAGGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4766-RA | 2815 | CG4766-RA | 98..2772 | 1..2675 | 13375 | 100 | Plus |
mab-21-RA | 2113 | mab-21-RA | 590..1045 | 806..1261 | 1065 | 82.2 | Plus |
mab-21.a | 1173 | mab-21.a | 561..1016 | 806..1261 | 1065 | 82.2 | Plus |
mab-21-RA | 2113 | mab-21-RA | 1075..1434 | 1300..1659 | 840 | 82.2 | Plus |
mab-21.a | 1173 | mab-21.a | 1046..1104 | 1300..1358 | 220 | 91.5 | Plus |
mab-21-RA | 2113 | mab-21-RA | 512..565 | 728..781 | 165 | 87 | Plus |
mab-21.a | 1173 | mab-21.a | 483..536 | 728..781 | 165 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 5889822..5891146 | 2673..1357 | 6170 | 98.1 | Minus |
chrX | 22417052 | chrX | 5892312..5893108 | 804..1 | 3725 | 98.1 | Minus |
chrX | 22417052 | chrX | 5891253..5891811 | 1360..802 | 2735 | 99.3 | Minus |
chrX | 22417052 | chrX | 5904331..5904955 | 1361..728 | 1230 | 80 | Minus |
chrX | 22417052 | chrX | 5901116..5901410 | 1659..1365 | 650 | 81.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 5997506..5998824 | 2675..1357 | 6595 | 100 | Minus |
X | 23542271 | X | 5999994..6000797 | 804..1 | 4020 | 100 | Minus |
X | 23542271 | X | 5998945..5999503 | 1360..802 | 2795 | 100 | Minus |
X | 23542271 | X | 6012072..6012696 | 1361..728 | 1260 | 80.3 | Minus |
X | 23542271 | X | 6008857..6009151 | 1659..1365 | 650 | 81.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 6005604..6006922 | 2675..1357 | 6595 | 100 | Minus |
X | 23527363 | X | 6008092..6008895 | 804..1 | 4020 | 100 | Minus |
X | 23527363 | X | 6007043..6007601 | 1360..802 | 2795 | 100 | Minus |
X | 23527363 | X | 6020261..6020716 | 1261..806 | 1065 | 82.2 | Minus |
X | 23527363 | X | 6016955..6017249 | 1659..1365 | 650 | 81.3 | Minus |
X | 23527363 | X | 6020170..6020231 | 1361..1300 | 235 | 91.9 | Minus |
X | 23527363 | X | 6020741..6020794 | 781..728 | 165 | 87 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 6358..6477 | 2427..2550 | 140 | 62.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5892312..5893108 | 1..804 | 98 | Minus | |
chrX | 5890478..5891144 | 1359..2018 | 98 | <- | Minus |
chrX | 5891255..5891808 | 805..1358 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4766-RA | 1..1107 | 602..1708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4766-RA | 1..1107 | 602..1708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4766-RA | 1..1107 | 602..1708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4766-RA | 1..1107 | 602..1708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4766-RA | 1..1107 | 602..1708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4766-RA | 1..2673 | 1..2673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4766-RA | 1..2673 | 1..2673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4766-RA | 1..2673 | 1..2673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4766-RA | 1..2673 | 1..2673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4766-RA | 1..2673 | 1..2673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5997508..5998822 | 1359..2673 | 100 | <- | Minus |
X | 5998947..5999500 | 805..1358 | 100 | <- | Minus |
X | 5999994..6000797 | 1..804 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5997508..5998822 | 1359..2673 | 100 | <- | Minus |
X | 5998947..5999500 | 805..1358 | 100 | <- | Minus |
X | 5999994..6000797 | 1..804 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5997508..5998822 | 1359..2673 | 100 | <- | Minus |
X | 5998947..5999500 | 805..1358 | 100 | <- | Minus |
X | 5999994..6000797 | 1..804 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5892980..5893533 | 805..1358 | 100 | <- | Minus |
arm_X | 5891541..5892855 | 1359..2673 | 100 | <- | Minus |
arm_X | 5894027..5894830 | 1..804 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6005606..6006920 | 1359..2673 | 100 | <- | Minus |
X | 6007045..6007598 | 805..1358 | 100 | <- | Minus |
X | 6008092..6008895 | 1..804 | 100 | Minus |
Translation from 601 to 1707
> GH11415.pep MLVPPDMMAAQTRMVYQMNRFCTERVQARMYKTATAIREICKIVQDILKE VELQEPRFISSLVECNGRFEGVEVISPNEFEIVLYLNQMGVFNFVDDGTL PGCAVLKLSDGRKRSMSLWVEFITASGYLSSRKIRARFQTLVAQACDKSV YRDMVKMVGDTSEVKLRIRERFVVQITPAFKCSGIWPRSAAHWPVPHLPW PHPNIVAEVKTEGFDLLSKESVIMQNKNNNAASMEGDAWVLSFFEAENRL LQGGCRRRCLSMLKTLRDRHLDLPGNPISAYHLKNLLLYECEKHPRDFEW DEGCIADRINGIFLQLISCLQYRRCPHYFLPALDMFKGKSPSALEQAAKQ VWRLTRELLTNANAFEKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22067-PA | 369 | GF22067-PA | 1..369 | 1..368 | 1927 | 96.2 | Plus |
Dana\GF22066-PA | 365 | GF22066-PA | 1..365 | 1..368 | 1607 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18459-PA | 368 | GG18459-PA | 1..368 | 1..368 | 1954 | 97.6 | Plus |
Dere\GG18458-PA | 365 | GG18458-PA | 1..365 | 1..368 | 1607 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24596-PA | 368 | GH24596-PA | 1..368 | 1..368 | 1865 | 91.8 | Plus |
Dgri\GH24594-PA | 365 | GH24594-PA | 1..365 | 1..368 | 1607 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4766-PA | 368 | CG4766-PA | 1..368 | 1..368 | 1941 | 100 | Plus |
mab-21-PA | 365 | CG4746-PA | 1..365 | 1..368 | 1567 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15265-PA | 369 | GI15265-PA | 1..369 | 1..368 | 1925 | 95.1 | Plus |
Dmoj\GI15264-PA | 365 | GI15264-PA | 1..365 | 1..368 | 1607 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14962-PA | 368 | GL14962-PA | 1..368 | 1..368 | 1895 | 92.7 | Plus |
Dper\GL14960-PA | 365 | GL14960-PA | 1..365 | 1..368 | 1607 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18415-PA | 368 | GA18415-PA | 1..368 | 1..368 | 1904 | 93.2 | Plus |
Dpse\GA18400-PA | 365 | GA18400-PA | 1..365 | 1..368 | 1607 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12604-PA | 355 | GM12604-PA | 1..355 | 1..368 | 1878 | 94.8 | Plus |
Dsec\GM12602-PA | 220 | GM12602-PA | 1..220 | 146..368 | 975 | 77.1 | Plus |
Dsec\GM12601-PA | 109 | GM12601-PA | 1..102 | 1..102 | 370 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16222-PA | 368 | GD16222-PA | 1..368 | 1..368 | 1976 | 99.2 | Plus |
Dsim\GD16221-PA | 150 | GD16221-PA | 1..150 | 216..368 | 635 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14839-PA | 368 | GJ14839-PA | 1..368 | 1..368 | 1927 | 95.1 | Plus |
Dvir\GJ14837-PA | 365 | GJ14837-PA | 1..365 | 1..368 | 1607 | 77.7 | Plus |
Translation from 601 to 1707
> GH11415.hyp MLVPPDMMAAQTRMVYQMNRFCTERVQARMYKTATAIREICKIVQDILKE VELQEPRFISSLVECNGRFEGVEVISPNEFEIVLYLNQMGVFNFVDDGTL PGCAVLKLSDGRKRSMSLWVEFITASGYLSSRKIRARFQTLVAQACDKSV YRDMVKMVGDTSEVKLRIRERFVVQITPAFKCSGIWPRSAAHWPVPHLPW PHPNIVAEVKTEGFDLLSKESVIMQNKNNNAASMEGDAWVLSFFEAENRL LQGGCRRRCLSMLKTLRDRHLDLPGNPISAYHLKNLLLYECEKHPRDFEW DEGCIADRINGIFLQLISCLQYRRCPHYFLPALDMFKGKSPSALEQAAKQ VWRLTRELLTNANAFEKL*