Clone GH11432 Report

Search the DGRC for GH11432

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:114
Well:32
Vector:pOT2
Associated Gene/Transcriptbabos-RA
Protein status:GH11432.pep: gold
Preliminary Size:4327
Sequenced Size:1115

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3624 2001-01-01 Release 2 assignment
CG3624 2001-07-04 Blastp of sequenced clone
CG3624 2003-01-01 Sim4 clustering to Release 3
CG3624 2008-04-29 Release 5.5 accounting
CG3624 2008-08-15 Release 5.9 accounting
CG3624 2008-12-18 5.12 accounting

Clone Sequence Records

GH11432.complete Sequence

1115 bp (1115 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051444

> GH11432.complete
TTGCCTCGAATGGACGGTTAACGGAAGTTTGCTATAAAGTTGAAAAATAT
AGAGAAAACCAAAATATATCAGAACCCAAAGCAATTCGTCTTGTGTGTGC
AAGTTGATGGATAAAAGAATTCAAAAGTGCTGACAGTGCTACCCGGAAAT
TGGAACACCAAAACGTCAACATAATTACGCGGCAATAATTTTCGAAAATC
CAAAAAGATCACCAGCAATCAATTGGTCCCGTGTGACACAGATTGCGGCG
GGTCGAGCAAAAGCGAAAAGTGCTGCCTATTGGATACCTATTTAGACACC
GATCGTCGGGAAGTGCACTTCGCATACAGGAAAACAGCATTATGATGTCC
AGAACAGATCTTCTAATCGCCGGACTCCTACTGATCGTGGGCAGTGCCGC
GGTGATCTCCTACCCACAATCCTCGATGGACGATGACCAAATGCAGGCCG
ATGATGACTTCGACTACGGAGGCGAAGACCAGAGTGCGCCCAGTCCGCAG
ACGAAGTCCCCCAATCCTGTAGCCAGCGAAAAGATCAACAAGACCCTCAG
TGTGACGGGAATCCGTGGCGAGGATGTGGTTCTCAAGTGCGATGTGGGAA
GCAATTTGCACAGCTCAGACGTGGTGGTCTTGTGGTACTTCGGCGATAAT
GTCATTTCCAATGGCAAGAACCTGGTGCAGCCCAACTTCAAACTGGACGC
CAACTACGACCTGACCATCCTGAAGGCGAGTCCCCAGGTGGCTGGCAGCT
ATCTCTGCAAGGTTCTGCCCTCCGGATCCGTGGTCAACACGAAGGTGACC
ATCGCCGAGCATTCCCTGGACGCCATTGCCCCGGAGAGCTCCACATCCGC
GGCGGGATCTGCGAGCAGTTTTCTGGGATGCACTGTCCTGGCATCGACCG
TGTTGCTCCTCCTGGGGATGGGCGCACATTAGATTAGTTTAGTATAACGC
TGGTGGAGCACTGCCACCTCTTCTACACTCTCCACTCTTCTCACAGGAAA
TGAGCATTTGAAGTCTTTGTTGATTGTAAATTTTTGTATTTGTAAAGACA
CAAAATCAACTTTATTTATTAAATAAAAAAGGAACCAAAGTAAACTTAAA
AAAAAAAAAAAAAAA

GH11432.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:36:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG3624-RA 1292 CG3624-RA 65..1162 1..1098 5490 100 Plus
CG3624.a 765 CG3624.a 69..765 402..1098 3485 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18280585..18281075 1097..607 2455 100 Minus
chr2R 21145070 chr2R 18288150..18288551 402..1 1995 99.8 Minus
chr2R 21145070 chr2R 18281135..18281338 605..402 990 99 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:44:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:23:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22394062..22394553 1098..607 2460 100 Minus
2R 25286936 2R 22401639..22402040 402..1 2010 100 Minus
2R 25286936 2R 22394612..22394816 606..402 1025 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:58:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 22395261..22395752 1098..607 2460 100 Minus
2R 25260384 2R 22402838..22403239 402..1 2010 100 Minus
2R 25260384 2R 22395811..22396015 606..402 1025 100 Minus
Blast to na_te.dros performed 2019-03-15 22:23:18
Subject Length Description Subject Range Query Range Score Percent Strand
TART-C 11124 TART-C TARTC 11124bp 10848..11033 53..229 125 57.7 Plus
Dhet\Uhu 1658 Dhet\Uhu DHUHUH3 1658bp AKA(S51651) Derived from X63028 (Rel. 36, Last updated, Version 7). 1557..1606 80..30 117 72.5 Minus

GH11432.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:24:28 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18280585..18281075 607..1097 100 <- Minus
chr2R 18281134..18281337 403..606 98 <- Minus
chr2R 18288150..18288551 1..402 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:35:31 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
CG3624-RA 1..591 342..932 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:27:52 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
CG3624-RA 1..591 342..932 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:17:25 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
babos-RA 1..591 342..932 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:01:12 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
CG3624-RA 1..591 342..932 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:20:15 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
babos-RA 1..591 342..932 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:27:33 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
CG3624-RA 17..1113 1..1097 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:27:52 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
CG3624-RA 17..1113 1..1097 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:17:25 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
babos-RA 20..1116 1..1097 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:01:12 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
CG3624-RA 17..1113 1..1097 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:20:15 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
babos-RA 20..1116 1..1097 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:24:28 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22394063..22394553 607..1097 100 <- Minus
2R 22394612..22394815 403..606 100 <- Minus
2R 22401639..22402040 1..402 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:24:28 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22394063..22394553 607..1097 100 <- Minus
2R 22394612..22394815 403..606 100 <- Minus
2R 22401639..22402040 1..402 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:24:28 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22394063..22394553 607..1097 100 <- Minus
2R 22394612..22394815 403..606 100 <- Minus
2R 22401639..22402040 1..402 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:17:25 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18281568..18282058 607..1097 100 <- Minus
arm_2R 18282117..18282320 403..606 100 <- Minus
arm_2R 18289144..18289545 1..402 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:39:02 Download gff for GH11432.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22395811..22396014 403..606 100 <- Minus
2R 22395262..22395752 607..1097 100 <- Minus
2R 22402838..22403239 1..402 100   Minus

GH11432.pep Sequence

Translation from 341 to 931

> GH11432.pep
MMSRTDLLIAGLLLIVGSAAVISYPQSSMDDDQMQADDDFDYGGEDQSAP
SPQTKSPNPVASEKINKTLSVTGIRGEDVVLKCDVGSNLHSSDVVVLWYF
GDNVISNGKNLVQPNFKLDANYDLTILKASPQVAGSYLCKVLPSGSVVNT
KVTIAEHSLDAIAPESSTSAAGSASSFLGCTVLASTVLLLLGMGAH*

GH11432.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:10:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13023-PA 195 GF13023-PA 1..195 2..196 566 66.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:10:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20698-PA 197 GG20698-PA 1..197 1..196 827 86.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:10:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20536-PA 173 GH20536-PA 2..166 21..192 361 48.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:48
Subject Length Description Subject Range Query Range Score Percent Strand
babos-PB 196 CG3624-PB 1..196 1..196 986 100 Plus
babos-PA 196 CG3624-PA 1..196 1..196 986 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:10:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18982-PA 163 GI18982-PA 1..145 34..177 336 49.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:10:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16927-PA 196 GL16927-PA 1..161 1..162 470 64.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:10:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17567-PA 196 GA17567-PA 1..161 1..162 423 65.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:10:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15643-PA 196 GM15643-PA 1..196 1..196 833 95.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:10:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25132-PA 196 GD25132-PA 1..196 1..196 836 95.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:10:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19944-PA 202 GJ19944-PA 1..183 1..177 393 48.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:10:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20826-PA 189 GK20826-PA 11..157 21..165 346 58.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:10:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11682-PA 197 GE11682-PA 1..197 1..196 722 89.8 Plus

GH11432.hyp Sequence

Translation from 341 to 931

> GH11432.hyp
MMSRTDLLIAGLLLIVGSAAVISYPQSSMDDDQMQADDDFDYGGEDQSAP
SPQTKSPNPVASEKINKTLSVTGIRGEDVVLKCDVGSNLHSSDVVVLWYF
GDNVISNGKNLVQPNFKLDANYDLTILKASPQVAGSYLCKVLPSGSVVNT
KVTIAEHSLDAIAPESSTSAAGSASSFLGCTVLASTVLLLLGMGAH*

GH11432.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:21:51
Subject Length Description Subject Range Query Range Score Percent Strand
babos-PB 196 CG3624-PB 1..196 1..196 986 100 Plus
babos-PA 196 CG3624-PA 1..196 1..196 986 100 Plus