BDGP Sequence Production Resources |
Search the DGRC for GH11459
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 114 |
Well: | 59 |
Vector: | pOT2 |
Associated Gene/Transcript | Irk2-RA |
Protein status: | GH11459.pep: gold |
Preliminary Size: | 1937 |
Sequenced Size: | 1914 |
Gene | Date | Evidence |
---|---|---|
CG4370 | 2001-07-04 | Blastp of sequenced clone |
CG4370 | 2003-01-01 | Sim4 clustering to Release 3 |
Irk2 | 2008-04-29 | Release 5.5 accounting |
Irk2 | 2008-08-15 | Release 5.9 accounting |
Irk2 | 2008-12-18 | 5.12 accounting |
1914 bp (1914 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051445
> GH11459.complete TCGGCCGTCATTTAATCCATTGGTCGGACTTGCGGATCCGTAGATTCGCT GTGACAGTTGCTCTGTGGCTCTGAGTGCCCTCTGATCTCCAGTCCTCAGA TCATCTCATTTCTGGAACGACACGCGTCGGCAAAACATAACGAAACGGAG CTTGTGAAACTAAAACATTGTGCCTATTATCAGTTCGCAACATGCCATCA TAAAGTGCCAAAAGTTTGTTGAGGCTCTTTTGCAAAACAATGGAGATCTA ACAAAATCTCGATTTAAGGGTGTCAATCAATTTAATATCTAAAAGATGCG TTTCAATTTCTCCACCCACTCGGCGGCCCCCACCTCTACGACCATACCAA CAACAACACAGGCAAATGGAGGCGAACAGGCCACCCAACCGCTCAAGAAG GCCATCGAAGCGGATCCCGATTCGCTGGACAGTGTGATCAGCAATCCTCA ATCCTATCCCATCACAATTGTGCCGAATAGGCCGACCAGCTACTATGGCC TATCCCAAAATGGCAAGCCGTTCCCCCGCCAACCGAGCTGCAGATCTCGC AATTTCCGGCCTGGCAGCATGAGACGTGTTCGCCGACGAGCGGTCTTCAA AAATGGTGACTGCAATGTGGTGCAGAAGCACCTGCAAAGACGCCGAGTTC GTTTCCTGCAGGACATGTACACCACCATGGTGGATTGGCAGTGGCGGTGG ACTCTCTTGGCCTTCGCACTCAGCTTTATCCTGTCTTGGCTCTTCTTTGC TCTCATCTGGTGGCTGATTATCTACACACACGGAGACTTGGAAGAGCCTC ACTTGCCAGAAAACCAAGAGGAATCTGGTTGGGCGCCTTGTGTTTCGGCC ATCGATGGCTTTACTTCCTGCTTCCTGTTCTCCATTGAAACGCAGCACAC TATTGGCTACGGTGTCCGAACCACCTCGCCCGAGTGTCCAGAGGCCATCT TCATGATGTGCTTCCAGTCCATCTATGGCGTGATGTCTTCAGCATTTATG GCCGGAATAGTGTTTGCCAAGATGACAAGGGCCAAACAGCGGGCACAGAC TTTGTTGTTCTCCAAACACGCCGTAATTTGCCAACGTGATGGCACCCTTT CGCTGATGTTCCGTGTGGGTGACATGCGAAAATCACACATCATTGGAGCC GGAGTGAGGGCTCAGTTGATCAGGACAAAGAGCACCAAGGAGGGTGAGGT GATGACACAGTACTTCACAGAACTGGAGATCGGTACTGATGACTCCGGCT CTGATTTGTTCTTCATCTGGCCCATGGTCATCGAGCACAAGATCGACGAG AACTCACCGCTCTATAATCTTAATGCCACTGATATGCTGCAGGATAAGTT CGAAATCGTGGTGATCCTAGAGGGCACCGTGGAGTCCACTGGACAGAGCA CTCAAGCCAGATCCAGCTATATTAACACTGAGATCCTTTGGGGACATCGT TTCGATCCAGTGGTGTTGTACAACAAGGATCTGCAGGCCTATGAAATCGA CTACGCTCGCTTTAACGAAACCACTCAGGTGGACACTCCGTTGTGCAGTG CTCGGGAATTGAACGAGATCTACAAGATCCAGGAGGGATTCCGCACACCA GAAACCACCTTTACCATGCGTCAACTGTCCCACAATCATTCTGACCAGGC CTCCTAGGCGCAGATTCCAGTGTTTCGTCCCTTGTGTTGCTATAGTTGTA ATCGTGTTTGTCCTATCTTCCCCATCGACCCAATCGAGGTGCTCCTGCAG TTCCGGCTATCAGACACCTGGAAGGCAAAGCCGCCTGCGTTGGCAGCTCT CGGTGCCCTTGTAATGGTCCTCGACTATCAACGCACTTAAATGTACGAGT TACCCTACGAAAATAAGTTAATAAACGCTTTAGTCAGAGACTACAAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Irk2-RA | 2076 | Irk2-RA | 64..1958 | 1..1895 | 9475 | 100 | Plus |
Irk2.d | 2262 | Irk2.d | 18..1912 | 1..1895 | 9475 | 100 | Plus |
Irk2.a | 1848 | Irk2.a | 64..1664 | 1..1601 | 8005 | 100 | Plus |
Irk2.a | 1848 | Irk2.a | 1665..1843 | 1717..1895 | 895 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19337753..19338537 | 1601..817 | 3835 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 19342540..19342834 | 295..1 | 1430 | 99 | Minus |
chr3R | 27901430 | chr3R | 19338589..19338866 | 818..541 | 1360 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 19341847..19342096 | 543..294 | 1235 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 19337343..19337520 | 1894..1717 | 875 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 19337584..19337702 | 1716..1599 | 545 | 99.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23514377..23515161 | 1601..817 | 3925 | 100 | Minus |
3R | 32079331 | 3R | 23519151..23519445 | 295..1 | 1475 | 100 | Minus |
3R | 32079331 | 3R | 23515213..23515490 | 818..541 | 1390 | 100 | Minus |
3R | 32079331 | 3R | 23518458..23518707 | 543..294 | 1250 | 100 | Minus |
3R | 32079331 | 3R | 23513967..23514145 | 1895..1717 | 895 | 100 | Minus |
3R | 32079331 | 3R | 23514209..23514326 | 1716..1599 | 590 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23255208..23255992 | 1601..817 | 3925 | 100 | Minus |
3R | 31820162 | 3R | 23259982..23260276 | 295..1 | 1475 | 100 | Minus |
3R | 31820162 | 3R | 23256044..23256321 | 818..541 | 1390 | 100 | Minus |
3R | 31820162 | 3R | 23259289..23259538 | 543..294 | 1250 | 100 | Minus |
3R | 31820162 | 3R | 23254798..23254976 | 1895..1717 | 895 | 100 | Minus |
3R | 31820162 | 3R | 23255040..23255157 | 1716..1599 | 590 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19337343..19337520 | 1717..1894 | 99 | <- | Minus |
chr3R | 19337584..19337699 | 1602..1716 | 99 | <- | Minus |
chr3R | 19337753..19338535 | 819..1601 | 99 | <- | Minus |
chr3R | 19338589..19338863 | 544..818 | 99 | <- | Minus |
chr3R | 19341847..19342094 | 296..543 | 99 | <- | Minus |
chr3R | 19342540..19342834 | 1..295 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Irk2-RA | 1..1362 | 296..1657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Irk2-RA | 1..1362 | 296..1657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Irk2-RA | 1..1362 | 296..1657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Irk2-RA | 1..1362 | 296..1657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Irk2-RA | 1..1362 | 296..1657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Irk2-RA | 1..1894 | 1..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Irk2-RA | 1..1894 | 1..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Irk2-RA | 1..1894 | 1..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Irk2-RA | 1..1894 | 1..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Irk2-RA | 1..1894 | 1..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23519151..23519445 | 1..295 | 100 | Minus | |
3R | 23514377..23515159 | 819..1601 | 100 | <- | Minus |
3R | 23515213..23515487 | 544..818 | 100 | <- | Minus |
3R | 23518458..23518705 | 296..543 | 100 | <- | Minus |
3R | 23513968..23514145 | 1717..1894 | 100 | <- | Minus |
3R | 23514209..23514323 | 1602..1716 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23519151..23519445 | 1..295 | 100 | Minus | |
3R | 23514377..23515159 | 819..1601 | 100 | <- | Minus |
3R | 23515213..23515487 | 544..818 | 100 | <- | Minus |
3R | 23518458..23518705 | 296..543 | 100 | <- | Minus |
3R | 23513968..23514145 | 1717..1894 | 100 | <- | Minus |
3R | 23514209..23514323 | 1602..1716 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23519151..23519445 | 1..295 | 100 | Minus | |
3R | 23514377..23515159 | 819..1601 | 100 | <- | Minus |
3R | 23515213..23515487 | 544..818 | 100 | <- | Minus |
3R | 23518458..23518705 | 296..543 | 100 | <- | Minus |
3R | 23513968..23514145 | 1717..1894 | 100 | <- | Minus |
3R | 23514209..23514323 | 1602..1716 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19339690..19339867 | 1717..1894 | 100 | <- | Minus |
arm_3R | 19339931..19340045 | 1602..1716 | 100 | <- | Minus |
arm_3R | 19340099..19340881 | 819..1601 | 100 | <- | Minus |
arm_3R | 19340935..19341209 | 544..818 | 100 | <- | Minus |
arm_3R | 19344180..19344427 | 296..543 | 100 | <- | Minus |
arm_3R | 19344873..19345167 | 1..295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23255208..23255990 | 819..1601 | 100 | <- | Minus |
3R | 23256044..23256318 | 544..818 | 100 | <- | Minus |
3R | 23259289..23259536 | 296..543 | 100 | <- | Minus |
3R | 23259982..23260276 | 1..295 | 100 | Minus | |
3R | 23254799..23254976 | 1717..1894 | 100 | <- | Minus |
3R | 23255040..23255154 | 1602..1716 | 100 | <- | Minus |
Translation from 295 to 1656
> GH11459.pep MRFNFSTHSAAPTSTTIPTTTQANGGEQATQPLKKAIEADPDSLDSVISN PQSYPITIVPNRPTSYYGLSQNGKPFPRQPSCRSRNFRPGSMRRVRRRAV FKNGDCNVVQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLF FALIWWLIIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSIETQ HTIGYGVRTTSPECPEAIFMMCFQSIYGVMSSAFMAGIVFAKMTRAKQRA QTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGAGVRAQLIRTKSTKEG EVMTQYFTELEIGTDDSGSDLFFIWPMVIEHKIDENSPLYNLNATDMLQD KFEIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQAYE IDYARFNETTQVDTPLCSARELNEIYKIQEGFRTPETTFTMRQLSHNHSD QAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18763-PA | 453 | GF18763-PA | 1..453 | 1..453 | 2284 | 94.3 | Plus |
Dana\GF16984-PA | 570 | GF16984-PA | 53..391 | 91..425 | 1115 | 60.2 | Plus |
Dana\GF14817-PA | 438 | GF14817-PA | 105..437 | 92..427 | 608 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12432-PA | 437 | GG12432-PA | 68..437 | 84..453 | 2011 | 99.5 | Plus |
Dere\GG11193-PA | 551 | GG11193-PA | 27..377 | 78..425 | 1110 | 59.1 | Plus |
Dere\GG21688-PA | 442 | GG21688-PA | 107..428 | 92..416 | 582 | 34 | Plus |
Dere\GG12431-PA | 85 | GG12431-PA | 3..85 | 1..83 | 400 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20768-PA | 535 | GH20768-PA | 141..535 | 56..453 | 1938 | 90 | Plus |
Dgri\GH19549-PA | 561 | GH19549-PA | 39..377 | 91..425 | 1114 | 60.8 | Plus |
Dgri\GH10563-PA | 441 | GH10563-PA | 101..422 | 92..416 | 599 | 35.3 | Plus |
Dgri\GH20768-PA | 535 | GH20768-PA | 1..84 | 1..82 | 235 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Irk2-PA | 453 | CG4370-PA | 1..453 | 1..453 | 2396 | 100 | Plus |
Irk2-PD | 454 | CG4370-PD | 1..454 | 1..453 | 2384 | 99.8 | Plus |
Irk2-PB | 437 | CG4370-PB | 68..437 | 84..453 | 1957 | 100 | Plus |
Irk2-PC | 451 | CG4370-PC | 68..429 | 84..445 | 1868 | 97.8 | Plus |
Irk1-PH | 526 | CG44159-PH | 10..348 | 91..425 | 1066 | 60.2 | Plus |
Irk1-PC | 526 | CG44159-PC | 10..348 | 91..425 | 1066 | 60.2 | Plus |
Irk1-PD | 532 | CG44159-PD | 16..354 | 91..425 | 1066 | 60.2 | Plus |
Irk1-PE | 540 | CG44159-PE | 24..362 | 91..425 | 1066 | 60.2 | Plus |
Irk1-PB | 555 | CG44159-PB | 39..377 | 91..425 | 1066 | 60.2 | Plus |
Irk1-PG | 652 | CG44159-PG | 136..474 | 91..425 | 1066 | 60.2 | Plus |
Irk1-PF | 652 | CG44159-PF | 136..474 | 91..425 | 1066 | 60.2 | Plus |
Irk3-PA | 442 | CG10369-PA | 107..432 | 92..420 | 570 | 34.2 | Plus |
Irk3-PD | 446 | CG10369-PD | 111..436 | 92..420 | 570 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10708-PA | 532 | GI10708-PA | 163..532 | 84..453 | 1971 | 96.8 | Plus |
Dmoj\GI22262-PA | 556 | GI22262-PA | 27..377 | 78..425 | 1114 | 59.1 | Plus |
Dmoj\GI16851-PA | 512 | GI16851-PA | 87..407 | 93..416 | 603 | 36.6 | Plus |
Dmoj\GI10708-PA | 532 | GI10708-PA | 1..87 | 1..82 | 243 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13847-PA | 453 | GL13847-PA | 1..453 | 1..453 | 2286 | 93.6 | Plus |
Dper\GL24490-PA | 549 | GL24490-PA | 39..377 | 91..425 | 1107 | 59.6 | Plus |
Dper\GL14708-PA | 514 | GL14708-PA | 211..498 | 126..416 | 530 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18138-PA | 453 | GA18138-PA | 1..453 | 1..453 | 2281 | 93.4 | Plus |
Dpse\GA18138-PB | 440 | GA18138-PB | 71..440 | 84..453 | 1978 | 97.6 | Plus |
Dpse\GA18138-PC | 454 | GA18138-PC | 71..424 | 84..437 | 1881 | 96.9 | Plus |
Dpse\GA19830-PA | 547 | GA19830-PA | 39..377 | 91..425 | 1107 | 59.6 | Plus |
Dpse\GA19830-PB | 523 | GA19830-PB | 15..353 | 91..425 | 1106 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23564-PA | 732 | GM23564-PA | 363..732 | 84..453 | 2019 | 99.7 | Plus |
Dsec\GM26492-PA | 549 | GM26492-PA | 27..377 | 78..425 | 1109 | 59.1 | Plus |
Dsec\GM17065-PA | 442 | GM17065-PA | 107..432 | 92..420 | 593 | 34.5 | Plus |
Dsec\GM23564-PA | 732 | GM23564-PA | 212..294 | 1..83 | 437 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18380-PA | 523 | GD18380-PA | 154..523 | 84..453 | 2016 | 99.7 | Plus |
Dsim\GD21006-PA | 549 | GD21006-PA | 27..377 | 78..425 | 1110 | 59.1 | Plus |
Dsim\GD21812-PA | 442 | GD21812-PA | 107..432 | 92..420 | 595 | 34.8 | Plus |
Dsim\GD18380-PA | 523 | GD18380-PA | 3..85 | 1..83 | 430 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23123-PA | 457 | GJ23123-PA | 1..457 | 1..453 | 2223 | 91 | Plus |
Dvir\GJ24053-PA | 550 | GJ24053-PA | 24..362 | 91..425 | 1116 | 60.8 | Plus |
Dvir\GJ17200-PA | 443 | GJ17200-PA | 96..421 | 92..416 | 584 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13155-PA | 436 | GK13155-PA | 67..436 | 84..453 | 1989 | 98.1 | Plus |
Dwil\GK14058-PA | 512 | GK14058-PA | 1..339 | 91..425 | 1112 | 60.2 | Plus |
Dwil\GK12266-PA | 521 | GK12266-PA | 12..348 | 93..425 | 1082 | 59.3 | Plus |
Dwil\GK18176-PA | 453 | GK18176-PA | 111..432 | 92..416 | 600 | 36.8 | Plus |
Dwil\GK22277-PA | 69 | GK22277-PA | 3..69 | 19..83 | 208 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Irk2-PA | 669 | GE23953-PA | 300..669 | 84..453 | 2013 | 99.5 | Plus |
Dyak\GE10360-PA | 553 | GE10360-PA | 27..377 | 78..425 | 1111 | 59.1 | Plus |
Dyak\GE12711-PA | 439 | GE12711-PA | 105..436 | 93..429 | 589 | 34 | Plus |
Dyak\Irk2-PA | 669 | GE23953-PA | 141..231 | 1..83 | 337 | 83.5 | Plus |
Translation from 295 to 1656
> GH11459.hyp MRFNFSTHSAAPTSTTIPTTTQANGGEQATQPLKKAIEADPDSLDSVISN PQSYPITIVPNRPTSYYGLSQNGKPFPRQPSCRSRNFRPGSMRRVRRRAV FKNGDCNVVQKHLQRRRVRFLQDMYTTMVDWQWRWTLLAFALSFILSWLF FALIWWLIIYTHGDLEEPHLPENQEESGWAPCVSAIDGFTSCFLFSIETQ HTIGYGVRTTSPECPEAIFMMCFQSIYGVMSSAFMAGIVFAKMTRAKQRA QTLLFSKHAVICQRDGTLSLMFRVGDMRKSHIIGAGVRAQLIRTKSTKEG EVMTQYFTELEIGTDDSGSDLFFIWPMVIEHKIDENSPLYNLNATDMLQD KFEIVVILEGTVESTGQSTQARSSYINTEILWGHRFDPVVLYNKDLQAYE IDYARFNETTQVDTPLCSARELNEIYKIQEGFRTPETTFTMRQLSHNHSD QAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Irk2-PA | 453 | CG4370-PA | 1..453 | 1..453 | 2396 | 100 | Plus |
Irk2-PD | 454 | CG4370-PD | 1..454 | 1..453 | 2384 | 99.8 | Plus |
Irk2-PB | 437 | CG4370-PB | 68..437 | 84..453 | 1957 | 100 | Plus |
Irk2-PC | 451 | CG4370-PC | 68..429 | 84..445 | 1868 | 97.8 | Plus |
Irk1-PH | 526 | CG44159-PH | 10..348 | 91..425 | 1066 | 60.2 | Plus |