BDGP Sequence Production Resources |
Search the DGRC for GH11472
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 114 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | CG30118-RA |
Protein status: | GH11472.pep: gold |
Preliminary Size: | 817 |
Sequenced Size: | 2289 |
Gene | Date | Evidence |
---|---|---|
CG5544 | 2001-01-01 | Release 2 assignment |
CG16859 | 2001-01-01 | Release 2 assignment |
CG30118 | 2001-07-04 | Blastp of sequenced clone |
CG30118 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30118 | 2008-04-29 | Release 5.5 accounting |
CG30118 | 2008-08-15 | Release 5.9 accounting |
CG30118 | 2008-12-18 | 5.12 accounting |
2289 bp (2289 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051446
> GH11472.complete CGCTTGTGTAATTAACGGATGCGGTGTCAACTAGTAAAAATGCAATACCA TCCCAAGTCGAATAAACTTTGATATTGCCCAAACAATCGAATGTGGTACA GATTGTGAAAGTAGCGTGCAACGCTGCCGTCTACTTAAACTTGTAAAGTT CCTCCTGCTCCGTCATCAGACTTTCTGATAGCATCCCGCGCAATCCAAAT TCTGGGAATGATTTCAGCGCGCCAGTGCGTCATTTAAATTGCAAAGCGCA CGAGTCCGAGCCACCAGCTGGATCTCCAGGATTCATAGACCAGGATCGAG ACCAGGTCGGCAGAAAAGCACGAGGAGCCACAGGAGTTGCCCGAGTTCCA CAGGCATAACCTTAAACGGCACGTGCACCGCGCGTAGAAGAGTTCTCTGC GTGCCACCACACAGCGAATCGGTTGCTCTCCCAAAAAACAAACACGCAAT ACCAAATTCCCGAAGTCGAAGACATGGCCACCCTCCTCAGCAACGGACAG CAGTCGGTAATGGCCAGCACCAGTAATGGTCAGGAGCAGCAACGGCACCA GGACGAACCGGAGCAGCAGCAGCAGGTCGAGATCAGAAAGTCGAGCTCAC CGAAACCAGGCGCCATGCCCAGCTTGAAGCTGAACAGAATGGGTTCGGTG TCACCGAAAGATAAACGAGTCTACAAAATCGTCCTCACTGGCGGGCCTTG CGGCGGAAAGACGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACC TTGGATGGAAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGT GGCGGTGTGAAGTTCTCCGATCTGACCGAGAAAGAGGCCTACAAGTTCCA GGAGAATCTGATCCGCACCATGGTTCAAATTGAGAACACCTACTTTGAGC TGGGCAACTCCAGCAATCGCAACTGTCTGATAATCTGCGATCGCGGCGTT ATGGATGCCAGTGCATACATATCCAAGGATAAATGGGAAAAGATGATGGC GGGCAATAATTGGAATCCCGTGGAGATGCGCGACAATCGTTACAACCAAA TCCTGCACTTGGTTTCGGCTGCCAACGGCGCCGAGGATTTCTACTCCACA GAGGACCATGCCTGTCGCTCGGAGGGCGTTGATTTGGCCCGGGAACTGGA CTACAAATCCGCCGCCGCCTGGGTTGGCCATCCCTACTTCGATGTGATCG ACAACTCCACCAACTTCGAGACCAAGATGAATCGCATGATTGAGTCGGTG TGCCAGAAATTGGGCATTGATATTGGCGACCGTTTGCAGGCCACGTCGCG CAAGCTGAAATATTTGGTGGCCCTTTTGCCGCCGGACAGCGAGTTTCCGC CCTTCCAGGATTTCGATGTCGTACATCATTATCTGCAGTCCGCCGGACCC AAGGTGCAGGCTCGCCTTCGCAAGCGTGGACAGAAGAACCACTGGAGCTA CATCCACACGCAGCGGCGTCCAAACGTTCACGGGCAGGCCCGCATTGAGG TGAAGACCCAGCTGACGCATCGTGACTACATGAACTTGCTGGCCCAGCGC GACGATGCTCACTTCACCATCTACAAGAAGCGCCGCTGCTTCCTTATCAA CAACCAATATTTTCAGCTTGATATTTATAAGGAGCCAGGCCACCCACGCT GCAAGGGATTGGTGCTTTTGGAGACGTATTCGTCACTCACCGGCGATGCC CTGAAGAACTGCATGCCCAAGTTCCTGAACATTGTAAAGGAGGTGACCGG CGATCCGGACTACTCCATGTTTAATCTATCCCTCAAGGAGGACTGGAGCA CCACGAAGAAGTTTTGCCGATCGGCGACGCACGGTAAGCAGGAGGAGCAG TCGCCAGTGCCGGCAAAGCAGTATCATCCATATGACGAGAACAGCGATTA GGGCATGAGGCCAGGAGTCAACATAATCCATAGCCAAAGAGAATGGAACC AAAAGATTATAGTTTCACTGCTGTACATAATATAAGCTTCTATCTTTCGT TGCTCCAATGCATGCCACCTCATTTCACTTTCATTTTCTATTCTTTTCAA AATTTCAAATTGATTGTAATCGTTTTGGATTTGATTTTCGCCTGACTATG TTTCTCTTTTGATTTTGTAGTTAAGGGCGCCGCTAATGGAGTCTCGAGCA CGCCGCTGCTCCTCAATGGTCAGTAGGCTTCCGAACTGTCCCTGAATCTC TTTTGCACACGCATATTACACGGCAAAAGCAAATTATAAGAACACCAATG ACCTGGCAATGAAATGTACAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30118.a | 2745 | CG30118.a | 55..2336 | 1..2282 | 11395 | 99.9 | Plus |
CG30118-RA | 2500 | CG30118-RA | 85..2366 | 1..2282 | 11395 | 99.9 | Plus |
CG30118-RC | 2616 | CG30118-RC | 1049..2050 | 837..1838 | 4995 | 99.9 | Plus |
CG30118-RC | 2616 | CG30118-RC | 81..917 | 1..837 | 4185 | 100 | Plus |
CG30118-RC | 2616 | CG30118-RC | 2045..2207 | 2120..2282 | 800 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14326832..14327526 | 694..1 | 3425 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 14317805..14318435 | 2269..1648 | 2910 | 97.8 | Minus |
chr2R | 21145070 | chr2R | 14318490..14318825 | 1652..1317 | 1635 | 99.1 | Minus |
chr2R | 21145070 | chr2R | 14318887..14319102 | 1317..1102 | 1065 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 14319522..14319664 | 1104..962 | 700 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 14319725..14319854 | 966..837 | 650 | 100 | Minus |
chr2R | 21145070 | chr2R | 14325305..14325375 | 763..693 | 355 | 100 | Minus |
chr2R | 21145070 | chr2R | 14324674..14324713 | 837..798 | 200 | 100 | Minus |
chr2R | 21145070 | chr2R | 14325039..14325078 | 799..760 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18439734..18440427 | 694..1 | 3470 | 100 | Minus |
2R | 25286936 | 2R | 18430724..18431358 | 2282..1648 | 3160 | 99.8 | Minus |
2R | 25286936 | 2R | 18431412..18431747 | 1652..1317 | 1665 | 99.7 | Minus |
2R | 25286936 | 2R | 18431809..18432024 | 1317..1102 | 1080 | 100 | Minus |
2R | 25286936 | 2R | 18432444..18432586 | 1104..962 | 700 | 99.3 | Minus |
2R | 25286936 | 2R | 18432647..18432776 | 966..837 | 650 | 100 | Minus |
2R | 25286936 | 2R | 18438206..18438276 | 763..693 | 355 | 100 | Minus |
2R | 25286936 | 2R | 18437575..18437614 | 837..798 | 200 | 100 | Minus |
2R | 25286936 | 2R | 18437940..18437979 | 799..760 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18440933..18441626 | 694..1 | 3470 | 100 | Minus |
2R | 25260384 | 2R | 18431923..18432557 | 2282..1648 | 3160 | 99.8 | Minus |
2R | 25260384 | 2R | 18432611..18432946 | 1652..1317 | 1665 | 99.7 | Minus |
2R | 25260384 | 2R | 18433008..18433223 | 1317..1102 | 1080 | 100 | Minus |
2R | 25260384 | 2R | 18433643..18433785 | 1104..962 | 700 | 99.3 | Minus |
2R | 25260384 | 2R | 18433846..18433975 | 966..837 | 650 | 100 | Minus |
2R | 25260384 | 2R | 18439405..18439475 | 763..693 | 355 | 100 | Minus |
2R | 25260384 | 2R | 18439139..18439178 | 799..760 | 200 | 100 | Minus |
2R | 25260384 | 2R | 18438774..18438813 | 837..798 | 200 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
roo | 9092 | roo DM_ROO 9092bp | 1035..1146 | 462..574 | 138 | 62.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6710..6819 | 464..574 | 137 | 62.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6703..6858 | 421..574 | 136 | 59.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6807 | 488..574 | 135 | 67.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2764..2862 | 480..582 | 134 | 64.1 | Plus |
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 131..198 | 2090..2023 | 133 | 66.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2289..2363 | 494..575 | 132 | 68.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2460 | 488..613 | 127 | 63.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6877 | 515..609 | 126 | 64.6 | Plus |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 642..737 | 575..474 | 119 | 65.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2765..2825 | 514..575 | 118 | 67.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14317805..14318434 | 1649..2269 | 97 | <- | Minus |
chr2R | 14318494..14318824 | 1318..1648 | 99 | <- | Minus |
chr2R | 14318887..14319100 | 1104..1317 | 99 | <- | Minus |
chr2R | 14319523..14319659 | 967..1103 | 100 | <- | Minus |
chr2R | 14319725..14319853 | 838..966 | 100 | <- | Minus |
chr2R | 14324674..14324711 | 800..837 | 100 | <- | Minus |
chr2R | 14325039..14325076 | 762..799 | 100 | <- | Minus |
chr2R | 14325307..14325374 | 694..761 | 100 | <- | Minus |
chr2R | 14326833..14326950 | 576..693 | 100 | == | Minus |
chr2R | 14327039..14327526 | 1..487 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30118-RA | 1..1428 | 474..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30118-RA | 1..1428 | 474..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30118-RA | 1..1428 | 474..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30118-RA | 1..1428 | 474..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30118-RA | 1..1428 | 474..1901 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30118-RA | 55..2323 | 1..2269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30118-RA | 55..2323 | 1..2269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30118-RA | 49..2317 | 1..2269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30118-RA | 55..2323 | 1..2269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30118-RA | 49..2317 | 1..2269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18431809..18432022 | 1104..1317 | 100 | <- | Minus |
2R | 18432445..18432581 | 967..1103 | 100 | <- | Minus |
2R | 18432647..18432775 | 838..966 | 100 | <- | Minus |
2R | 18437575..18437612 | 800..837 | 100 | <- | Minus |
2R | 18430737..18431357 | 1649..2269 | 100 | <- | Minus |
2R | 18431416..18431746 | 1318..1648 | 100 | <- | Minus |
2R | 18437940..18437977 | 762..799 | 100 | <- | Minus |
2R | 18438208..18438275 | 694..761 | 100 | <- | Minus |
2R | 18439735..18440427 | 1..693 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18431809..18432022 | 1104..1317 | 100 | <- | Minus |
2R | 18432445..18432581 | 967..1103 | 100 | <- | Minus |
2R | 18432647..18432775 | 838..966 | 100 | <- | Minus |
2R | 18437575..18437612 | 800..837 | 100 | <- | Minus |
2R | 18430737..18431357 | 1649..2269 | 100 | <- | Minus |
2R | 18431416..18431746 | 1318..1648 | 100 | <- | Minus |
2R | 18437940..18437977 | 762..799 | 100 | <- | Minus |
2R | 18438208..18438275 | 694..761 | 100 | <- | Minus |
2R | 18439735..18440427 | 1..693 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18431809..18432022 | 1104..1317 | 100 | <- | Minus |
2R | 18432445..18432581 | 967..1103 | 100 | <- | Minus |
2R | 18432647..18432775 | 838..966 | 100 | <- | Minus |
2R | 18437575..18437612 | 800..837 | 100 | <- | Minus |
2R | 18430737..18431357 | 1649..2269 | 100 | <- | Minus |
2R | 18431416..18431746 | 1318..1648 | 100 | <- | Minus |
2R | 18437940..18437977 | 762..799 | 100 | <- | Minus |
2R | 18438208..18438275 | 694..761 | 100 | <- | Minus |
2R | 18439735..18440427 | 1..693 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14318242..14318862 | 1649..2269 | 100 | <- | Minus |
arm_2R | 14318921..14319251 | 1318..1648 | 100 | <- | Minus |
arm_2R | 14319314..14319527 | 1104..1317 | 100 | <- | Minus |
arm_2R | 14319950..14320086 | 967..1103 | 100 | <- | Minus |
arm_2R | 14320152..14320280 | 838..966 | 100 | <- | Minus |
arm_2R | 14325080..14325117 | 800..837 | 100 | <- | Minus |
arm_2R | 14325445..14325482 | 762..799 | 100 | <- | Minus |
arm_2R | 14325713..14325780 | 694..761 | 100 | <- | Minus |
arm_2R | 14327240..14327932 | 1..693 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18431936..18432556 | 1649..2269 | 100 | <- | Minus |
2R | 18432615..18432945 | 1318..1648 | 100 | <- | Minus |
2R | 18433008..18433221 | 1104..1317 | 100 | <- | Minus |
2R | 18433644..18433780 | 967..1103 | 100 | <- | Minus |
2R | 18433846..18433974 | 838..966 | 100 | <- | Minus |
2R | 18438774..18438811 | 800..837 | 100 | <- | Minus |
2R | 18439139..18439176 | 762..799 | 100 | <- | Minus |
2R | 18439407..18439474 | 694..761 | 100 | <- | Minus |
2R | 18440934..18441626 | 1..693 | 100 | Minus |
Translation from 473 to 1900
> GH11472.pep MATLLSNGQQSVMASTSNGQEQQRHQDEPEQQQQVEIRKSSSPKPGAMPS LKLNRMGSVSPKDKRVYKIVLTGGPCGGKTTGQSRLCTFFENLGWKVFRV PETATVLLSGGVKFSDLTEKEAYKFQENLIRTMVQIENTYFELGNSSNRN CLIICDRGVMDASAYISKDKWEKMMAGNNWNPVEMRDNRYNQILHLVSAA NGAEDFYSTEDHACRSEGVDLARELDYKSAAAWVGHPYFDVIDNSTNFET KMNRMIESVCQKLGIDIGDRLQATSRKLKYLVALLPPDSEFPPFQDFDVV HHYLQSAGPKVQARLRKRGQKNHWSYIHTQRRPNVHGQARIEVKTQLTHR DYMNLLAQRDDAHFTIYKKRRCFLINNQYFQLDIYKEPGHPRCKGLVLLE TYSSLTGDALKNCMPKFLNIVKEVTGDPDYSMFNLSLKEDWSTTKKFCRS ATHGKQEEQSPVPAKQYHPYDENSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12764-PA | 525 | GF12764-PA | 14..506 | 5..458 | 2258 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20971-PA | 522 | GG20971-PA | 1..522 | 1..475 | 2479 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20216-PA | 546 | GH20216-PA | 12..546 | 6..475 | 2155 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ttd14-PA | 475 | CG30118-PA | 1..475 | 1..475 | 2532 | 100 | Plus |
Ttd14-PB | 471 | CG30118-PB | 1..455 | 1..455 | 2411 | 99.8 | Plus |
Ttd14-PC | 515 | CG30118-PC | 1..499 | 1..455 | 2356 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19386-PA | 543 | GI19386-PA | 1..543 | 1..475 | 1934 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16702-PA | 519 | GL16702-PA | 14..519 | 1..475 | 2096 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15662-PB | 495 | GA15662-PB | 14..495 | 1..475 | 2291 | 88.6 | Plus |
Dpse\GA15662-PA | 539 | GA15662-PA | 14..539 | 1..475 | 2234 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19906-PA | 524 | GM19906-PA | 1..524 | 1..475 | 2469 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25392-PA | 522 | GD25392-PA | 1..522 | 1..475 | 2442 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22448-PA | 552 | GJ22448-PA | 17..552 | 6..475 | 2052 | 74.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23228-PA | 536 | GK23228-PA | 41..536 | 28..475 | 2208 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13911-PA | 527 | GE13911-PA | 1..527 | 1..475 | 2479 | 88.4 | Plus |
Translation from 473 to 1900
> GH11472.hyp MATLLSNGQQSVMASTSNGQEQQRHQDEPEQQQQVEIRKSSSPKPGAMPS LKLNRMGSVSPKDKRVYKIVLTGGPCGGKTTGQSRLCTFFENLGWKVFRV PETATVLLSGGVKFSDLTEKEAYKFQENLIRTMVQIENTYFELGNSSNRN CLIICDRGVMDASAYISKDKWEKMMAGNNWNPVEMRDNRYNQILHLVSAA NGAEDFYSTEDHACRSEGVDLARELDYKSAAAWVGHPYFDVIDNSTNFET KMNRMIESVCQKLGIDIGDRLQATSRKLKYLVALLPPDSEFPPFQDFDVV HHYLQSAGPKVQARLRKRGQKNHWSYIHTQRRPNVHGQARIEVKTQLTHR DYMNLLAQRDDAHFTIYKKRRCFLINNQYFQLDIYKEPGHPRCKGLVLLE TYSSLTGDALKNCMPKFLNIVKEVTGDPDYSMFNLSLKEDWSTTKKFCRS ATHGKQEEQSPVPAKQYHPYDENSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30118-PA | 475 | CG30118-PA | 1..475 | 1..475 | 2532 | 100 | Plus |
CG30118-PB | 471 | CG30118-PB | 1..455 | 1..455 | 2411 | 99.8 | Plus |
CG30118-PC | 515 | CG30118-PC | 1..499 | 1..455 | 2356 | 91 | Plus |