BDGP Sequence Production Resources |
Search the DGRC for GH11578
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 115 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3306-RA |
Protein status: | GH11578.pep: gold |
Preliminary Size: | 1111 |
Sequenced Size: | 1042 |
Gene | Date | Evidence |
---|---|---|
CG3306 | 2001-01-01 | Release 2 assignment |
CG3306 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3306 | 2003-08-02 | Blastp of sequenced clone |
CG3306 | 2008-04-29 | Release 5.5 accounting |
CG3306 | 2008-08-15 | Release 5.9 accounting |
CG3306 | 2008-12-18 | 5.12 accounting |
1042 bp (1042 high quality bases) assembled on 2003-08-02
GenBank Submission: BT010104
> GH11578.complete ATTTCAACGAACATTTACTCAACTTTAAAATTGTTATTTTTGGTATACAG TGTAAATAAGCTTTCTAAAAATCATGGAGCAGAAGACAACAAAATCTTCA AGCATTACCCAGGTTGATATTCTGTTGACTGGATCCAGATACGTTGGTCC CAGTGATGAGTTGGGCATGCAGGAGATGGGTGTCTACATTTATCCGGATG GGACATGCTACACGGGAGAGTTTCTCAACAATCGTTTCCACGGAAAAGGC ACCATACAAATTCCTGATTCCTTGGGCGTTACCTATCAAGTAACCCATCA CAATGGCAGACTGGTCTCGATCGATCAGGTTAACTTCAATGATAGTCTGC CCGTCGACTTTGAGATGAAGGATCATTACACGATGAGTTTCAAACCCTGG ACGTATTGCACGCCGGAGGATCGCCGATTCTACCAGGAAACCAAGGAGCC TATGGATGCCGTCGGTCCGAATAAGTTCCAGTCCAAGGACGGACCAAATC CGCTCAACCTGGGTCGCAATATTTTCGATCTGGGCTTCGGACTGCTGGGC AATCGTGGCTTCATGTTGGATACAAAGACGTTTAGCAACCAGAGTATATA TCTAGGATGTCGGGAGGCTCGTCGCTGGATCCGAGAGAACTGTGCCCATG GACCACTCAGCAAGCGTCACCACAAACAGAAGTTATTGGCCCGTTTTGCC CGTGAGATCATCCGGAACAATCAGGAGAATGCAGGCTGCAGCCAAAGGGA GTTCATGACCAAAATCCATCCTTGTAAGCACTCCACCAGCTTGGATAGCT TCGCTTCGGAGCGTCTCCATCTGGCCAGCACTACGGATTCCACGACGTCG GAGGCTCAGGCCATGGGTTTGCGTCATGAGGAGTTCCATGGCAATTGGAC AAGAGCGAAGAGCGAGAGCAGCGTGTGTCGCATCAACTGATTGATCCTTT GAATTTTTTGTTACTTTCGCTTCTACTTTTCGATGTGGCCTTAAATTAAT ATATTGTAAATCGTTGGTTGACCCACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3306-RA | 1026 | CG3306-RA | 1..1026 | 1..1026 | 5130 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9593385..9594413 | 1..1026 | 4990 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9601523..9602549 | 1..1027 | 5135 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9594623..9595649 | 1..1027 | 5135 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbif\P-element_M | 2935 | Dbif\P-element_M P_M 2935bp Derived from X60990. | 2496..2585 | 1016..924 | 134 | 62.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9593385..9594413 | 1..1026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3306-RA | 1..867 | 74..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3306-RA | 1..867 | 74..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3306-RA | 1..867 | 74..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3306-RA | 1..867 | 74..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3306-RA | 1..867 | 74..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3306-RA | 1..1026 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3306-RA | 1..1026 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3306-RA | 1..1026 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3306-RA | 1..1026 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3306-RA | 1..1026 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9601523..9602548 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9601523..9602548 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9601523..9602548 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9594623..9595648 | 1..1026 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9594623..9595648 | 1..1026 | 100 | Plus |
Translation from 73 to 939
> GH11578.hyp MEQKTTKSSSITQVDILLTGSRYVGPSDELGMQEMGVYIYPDGTCYTGEF LNNRFHGKGTIQIPDSLGVTYQVTHHNGRLVSIDQVNFNDSLPVDFEMKD HYTMSFKPWTYCTPEDRRFYQETKEPMDAVGPNKFQSKDGPNPLNLGRNI FDLGFGLLGNRGFMLDTKTFSNQSIYLGCREARRWIRENCAHGPLSKRHH KQKLLARFAREIIRNNQENAGCSQREFMTKIHPCKHSTSLDSFASERLHL ASTTDSTTSEAQAMGLRHEEFHGNWTRAKSESSVCRIN*
Translation from 73 to 939
> GH11578.pep MEQKTTKSSSITQVDILLTGSRYVGPSDELGMQEMGVYIYPDGTCYTGEF LNNRFHGKGTIQIPDSLGVTYQVTHHNGRLVSIDQVNFNDSLPVDFEMKD HYTMSFKPWTYCTPEDRRFYQETKEPMDAVGPNKFQSKDGPNPLNLGRNI FDLGFGLLGNRGFMLDTKTFSNQSIYLGCREARRWIRENCAHGPLSKRHH KQKLLARFAREIIRNNQENAGCSQREFMTKIHPCKHSTSLDSFASERLHL ASTTDSTTSEAQAMGLRHEEFHGNWTRAKSESSVCRIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20102-PA | 316 | GF20102-PA | 5..316 | 4..288 | 794 | 50.2 | Plus |
Dana\GF25142-PA | 392 | GF25142-PA | 3..190 | 4..190 | 210 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15389-PA | 288 | GG15389-PA | 1..288 | 1..288 | 1364 | 86.1 | Plus |
Dere\GG15388-PA | 380 | GG15388-PA | 5..211 | 8..216 | 228 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16306-PA | 373 | GH16306-PA | 13..212 | 17..218 | 262 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3306-PA | 288 | CG3306-PA | 1..288 | 1..288 | 1554 | 100 | Plus |
CG3222-PA | 379 | CG3222-PA | 8..210 | 12..216 | 245 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13250-PA | 299 | GI13250-PA | 1..299 | 1..288 | 531 | 40.1 | Plus |
Dmoj\GI13249-PA | 376 | GI13249-PA | 4..221 | 7..227 | 243 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10306-PA | 393 | GL10306-PA | 8..215 | 11..216 | 233 | 29.2 | Plus |
Dper\GL19362-PA | 347 | GL19362-PA | 13..210 | 17..216 | 193 | 29 | Plus |
Dper\GL10307-PA | 140 | GL10307-PA | 9..140 | 174..288 | 161 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17254-PA | 313 | GA17254-PA | 28..313 | 19..288 | 631 | 44.6 | Plus |
Dpse\GA28670-PA | 393 | GA28670-PA | 8..215 | 11..216 | 231 | 29.2 | Plus |
Dpse\GA25934-PA | 369 | GA25934-PA | 13..210 | 17..216 | 192 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25162-PA | 288 | GM25162-PA | 1..288 | 1..288 | 1494 | 94.8 | Plus |
Dsec\GM25160-PA | 247 | GM25160-PA | 17..247 | 58..288 | 1200 | 93.9 | Plus |
Dsec\GM16869-PA | 185 | GM16869-PA | 1..185 | 104..288 | 951 | 93 | Plus |
Dsec\GM25159-PA | 363 | GM25159-PA | 13..157 | 17..161 | 189 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14195-PA | 288 | GD14195-PA | 1..288 | 1..288 | 1504 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12021-PA | 302 | GJ12021-PA | 5..302 | 9..288 | 625 | 44.5 | Plus |
Dvir\GJ12020-PA | 374 | GJ12020-PA | 2..229 | 10..236 | 236 | 29.4 | Plus |