Clone GH11673 Report

Search the DGRC for GH11673

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:116
Well:73
Vector:pOT2
Associated Gene/TranscriptAats-gln-RA
Protein status:GH11673.pep: gold
Preliminary Size:2327
Sequenced Size:2454

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10506 2000-02-14 Blastp of sequenced clone
CG10506 2001-01-01 Release 2 assignment
Aats-gln 2008-04-29 Release 5.5 accounting
Aats-gln 2008-08-15 Release 5.9 accounting
Aats-gln 2008-12-18 5.12 accounting

Clone Sequence Records

GH11673.complete Sequence

2454 bp (2454 high quality bases) assembled on 2000-02-14

GenBank Submission: AF145668

> GH11673.complete
ATCAGGAAGAGACAAAATCGGGGAAATGGCTGGAGATGATCTGATTGCGA
AATTCCAGGCGCTCGGCATGAGCGAGCAAAAGGCGAAGGAAACTTTGAAG
AATGCCAACGTGACAAAGAATCTCCAGCTGTCGCTGGCGGCGGCGGGAAG
CGCCACCCTATCCGACGGCACTGGTATGCTGATCTACCACATGGCTACCA
AGCTGAAGCCGCAGACTGCGGACCATCTGCCTCTTCTGGTGCGCTACATA
GTGGAGCACAAGCTGGACAACACTCAGCGCGTTGATGCCGCCCTGGAGTA
CCTGCTCAAGTGCGGTCAGAGCCTGAATGCCAACATAGATCTGCAGGCGC
TTGAGAAGGAGTGCGGCGTTGGAGTGGTGGTCACTCCGGAGCAGATCGAG
CGCACTGTGCAGGCCAAGATCAAGGCCAGCTACAAGGAGGCCTTGTTGGA
GCAACGCTACCATTTTAACTCTTTTAAAATCCTGCAAGATGTCCGGGGAG
AACTCAAGTGGGCGGATGCCAAGTCCGTGAAGGCGGCCATCGATGTGGAG
ATCTTCGATCTGTTGGGTCCCAAAACAGAAGCAGACTTGAAACCTCAGAC
AAAAGCAAACGATAAGCCGAAGGCTGCAAAACCGAAAGCTGAAGTAACTC
CTGCCGCTCAAACGGCTGAAGCTGCATCCGATGGAGCCACCACCATTTCG
GAACTCATGAAAACCAAGGTACACTTCCATGCTCCCGGAGAGAACTTCAA
GGCAGATGGCTACGTGGTCACCGAGCACACGGAGCGGCTACTAAAGGAGC
ACCTGGCGAGAACTGGAGGCAAAGTGCACACACGATTTCCGCCAGAGCCG
AATGGCATCCTGCACATCGGTCACGCAAAGGCTATTAACATTAACTTTGG
ATACGCGGCTGCCCACGATGGAGTCTGTTACTTGCGCTACGACGACACCA
ATCCCGAGAAGGAGGAGGAGAAGTTCTTTTTGGCCATCAAGGAGATGGTG
GAATGGCTGGGCTACAAACCATTCAAGATCACCTACTCCTCGGACAACTT
CCAGCAGCTGTACGAGTGGGCTGTTGTGCTGATTAACAAAGGATTGGCCT
ACGTGTGTCACCAGAAGGCGGAGGAACTGAAAGGCTTCAATCCGAAGCCC
AGCCCTTGGAGGGAGCGTCCCATTGAGGAGTCACTTCGGCTGTTTGAAGA
CATGAAGCGTGGAAAGATCGACGAGGGAGCGGCCACACTGCGCATGAAGG
TCACCCTGGAGGAGGGCAAGATGGACCCGGTGGCGTATCGCATTAAGTTT
ATCTCACACCACCGTACGGGCTCTGACTGGTGCATTTACCCCACGTATGA
TTATACTCATTGCCTTTGTGACTCTCTCGAGGATATAACCCACTCACTGT
GCACCAAGGAGTTCCAGTCGAGACGATCCTCCTACTACTGGCTGTGCAAC
GCTTTGGGTATCTACTGCCCGGTGCAGTGGGAATACGGTAGGCTGAACAT
GAACTACGCACTTGTGTCAAAGCGCAAGATTGCAAAGCTGATCACGGAGC
AGATTGTCCACGACTGGGACGATCCCAGGCTGTTTACTCTGACGGCTCTG
AGACGTAGAGGCTTCCCAGCAGAGGCCATCAACAACTTCTGCGCCCAGAT
GGGCGTAACGGGTGCCCAGATCGCCGTCGACCCCGCCATGTTGGAGGCAG
CAGTGCGGGATGTGCTAAATGTTACAGCTCCCCGTCGGTTGGTTGTCCTG
GAACCGCTCAAAGTTACCATAAAGAATTTCCCTCATGCAGCGCCCGTGCA
GCTAGAAGTGCCTGATTTCCCGCAAAACCCACAGCAAGGAACTCATAAGA
TCACCCTAGACAAGGTGATCTATATTGAGCAGGGAGACTTCAAGTTGGAG
CCTGAAAAGGGATACCGTCGTCTGGCACCGAAGCAATCTGTGGGTCTCCG
GCACGCGGGTCTCGTAATCAGCGTGGATGAGATAGTAAAGGATCCGGCGA
CTGGTCAGGTGGTGGAACTAATCTGCACCAGCCAACCTGCCGAGCAGGCC
GAGAAGCCCAAGGCTTTTGTCCAGTGGGTATCGCAGCCGATACAGCTGGA
AGTGCGTCTGTACGAGCAGCTCTTCAAGCACAAGAATCCCGAGGATCCCA
ACGAGGTGCCCGGCGGTTTCCTGAGCGACATCAGTGAGCAATCCATGTCG
GTGGTGGTGGCATTCGCGGATCGGGCCCTAAACCAGGCCAAGGTTTACGA
CAAGTTCCAGTTCGAGAGGATTGGCTTCTTCTCCGTAGATCCTGACACCA
GTGCGAACCACCTAGTGTTCAACCGCACTGTGGGATTGAAGGAAGATGCG
GGCAAGAAGTGAACGGGATTTCGGGAACCCACAAATGAAAAGAAACAAAA
TCCGTATCACATTAAAATTCGATTTATAAAATCAAAAAAAAAAAAAAAAA
AAAA

GH11673.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-gln-RA 2456 Aats-gln-RA 23..2456 1..2434 12170 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21086350..21088782 2433..1 12165 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:44:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25263265..25265699 2435..1 12175 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:02:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 25004096..25006530 2435..1 12175 100 Minus
Blast to na_te.dros performed on 2019-03-15 19:06:28 has no hits.

GH11673.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:07:24 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21086350..21088782 1..2433 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:36:01 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gln-RA 1..2337 26..2362 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:34:28 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gln-RA 1..2337 26..2362 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:41:35 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gln-RA 1..2337 26..2362 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:09:04 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gln-RA 1..2337 26..2362 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:09:45 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gln-RA 1..2337 26..2362 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:36:58 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gln-RA 23..2455 1..2433 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:34:28 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gln-RA 37..2469 1..2433 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:41:35 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gln-RA 23..2455 1..2433 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:09:04 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gln-RA 23..2455 1..2433 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:09:45 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-gln-RA 23..2455 1..2433 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:07:24 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25263267..25265699 1..2433 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:07:24 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25263267..25265699 1..2433 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:07:24 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25263267..25265699 1..2433 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:41:35 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21088989..21091421 1..2433 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:46:38 Download gff for GH11673.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25004098..25006530 1..2433 100   Minus

GH11673.hyp Sequence

Translation from 1 to 2361

> GH11673.hyp
SGRDKIGEMAGDDLIAKFQALGMSEQKAKETLKNANVTKNLQLSLAAAGS
ATLSDGTGMLIYHMATKLKPQTADHLPLLVRYIVEHKLDNTQRVDAALEY
LLKCGQSLNANIDLQALEKECGVGVVVTPEQIERTVQAKIKASYKEALLE
QRYHFNSFKILQDVRGELKWADAKSVKAAIDVEIFDLLGPKTEADLKPQT
KANDKPKAAKPKAEVTPAAQTAEAASDGATTISELMKTKVHFHAPGENFK
ADGYVVTEHTERLLKEHLARTGGKVHTRFPPEPNGILHIGHAKAININFG
YAAAHDGVCYLRYDDTNPEKEEEKFFLAIKEMVEWLGYKPFKITYSSDNF
QQLYEWAVVLINKGLAYVCHQKAEELKGFNPKPSPWRERPIEESLRLFED
MKRGKIDEGAATLRMKVTLEEGKMDPVAYRIKFISHHRTGSDWCIYPTYD
YTHCLCDSLEDITHSLCTKEFQSRRSSYYWLCNALGIYCPVQWEYGRLNM
NYALVSKRKIAKLITEQIVHDWDDPRLFTLTALRRRGFPAEAINNFCAQM
GVTGAQIAVDPAMLEAAVRDVLNVTAPRRLVVLEPLKVTIKNFPHAAPVQ
LEVPDFPQNPQQGTHKITLDKVIYIEQGDFKLEPEKGYRRLAPKQSVGLR
HAGLVISVDEIVKDPATGQVVELICTSQPAEQAEKPKAFVQWVSQPIQLE
VRLYEQLFKHKNPEDPNEVPGGFLSDISEQSMSVVVAFADRALNQAKVYD
KFQFERIGFFSVDPDTSANHLVFNRTVGLKEDAGKK*

GH11673.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:23:36
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-gln-PA 778 CG10506-PA 1..778 9..786 4067 100 Plus
Aats-glupro-PA 1714 CG5394-PA 202..688 273..763 541 30.2 Plus

GH11673.pep Sequence

Translation from 25 to 2361

> GH11673.pep
MAGDDLIAKFQALGMSEQKAKETLKNANVTKNLQLSLAAAGSATLSDGTG
MLIYHMATKLKPQTADHLPLLVRYIVEHKLDNTQRVDAALEYLLKCGQSL
NANIDLQALEKECGVGVVVTPEQIERTVQAKIKASYKEALLEQRYHFNSF
KILQDVRGELKWADAKSVKAAIDVEIFDLLGPKTEADLKPQTKANDKPKA
AKPKAEVTPAAQTAEAASDGATTISELMKTKVHFHAPGENFKADGYVVTE
HTERLLKEHLARTGGKVHTRFPPEPNGILHIGHAKAININFGYAAAHDGV
CYLRYDDTNPEKEEEKFFLAIKEMVEWLGYKPFKITYSSDNFQQLYEWAV
VLINKGLAYVCHQKAEELKGFNPKPSPWRERPIEESLRLFEDMKRGKIDE
GAATLRMKVTLEEGKMDPVAYRIKFISHHRTGSDWCIYPTYDYTHCLCDS
LEDITHSLCTKEFQSRRSSYYWLCNALGIYCPVQWEYGRLNMNYALVSKR
KIAKLITEQIVHDWDDPRLFTLTALRRRGFPAEAINNFCAQMGVTGAQIA
VDPAMLEAAVRDVLNVTAPRRLVVLEPLKVTIKNFPHAAPVQLEVPDFPQ
NPQQGTHKITLDKVIYIEQGDFKLEPEKGYRRLAPKQSVGLRHAGLVISV
DEIVKDPATGQVVELICTSQPAEQAEKPKAFVQWVSQPIQLEVRLYEQLF
KHKNPEDPNEVPGGFLSDISEQSMSVVVAFADRALNQAKVYDKFQFERIG
FFSVDPDTSANHLVFNRTVGLKEDAGKK*

GH11673.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:47:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17431-PA 780 GF17431-PA 1..780 1..778 3785 89 Plus
Dana\GF17974-PA 1709 GF17974-PA 202..688 265..755 558 30 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:47:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12270-PA 778 GG12270-PA 1..778 1..778 4126 98.1 Plus
Dere\GG12386-PA 1712 GG12386-PA 200..686 265..755 570 30.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:47:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22398-PA 778 GH22398-PA 1..778 1..778 3479 80.2 Plus
Dgri\GH23578-PA 1706 GH23578-PA 199..685 265..755 575 31 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:16
Subject Length Description Subject Range Query Range Score Percent Strand
GlnRS-PA 778 CG10506-PA 1..778 1..778 4067 100 Plus
GluProRS-PA 1714 CG5394-PA 202..688 265..755 541 30.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:47:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24483-PA 785 GI24483-PA 1..785 1..778 3537 81.4 Plus
Dmoj\GI23457-PA 1709 GI23457-PA 197..683 265..755 568 31 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:47:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22108-PA 778 GL22108-PA 1..778 1..778 3716 88.6 Plus
Dper\GL24160-PA 1725 GL24160-PA 207..693 265..755 578 31.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10360-PA 778 GA10360-PA 1..778 1..778 3715 88.6 Plus
Dpse\GA18849-PA 1725 GA18849-PA 207..693 265..755 573 31.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17736-PA 778 GM17736-PA 1..778 1..778 4131 98.1 Plus
Dsec\GM23523-PA 1094 GM23523-PA 202..688 265..755 542 30.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:47:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18218-PA 778 GD18218-PA 1..778 1..778 4159 99 Plus
Dsim\GD18332-PA 745 GD18332-PA 202..688 265..755 544 30.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:47:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24549-PA 782 GJ24549-PA 1..782 1..778 3536 81.8 Plus
Dvir\GJ22579-PA 747 GJ22579-PA 197..683 265..755 573 31.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:47:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14344-PA 779 GK14344-PA 1..779 1..778 3597 84 Plus
Dwil\GK11601-PA 1717 GK11601-PA 208..694 265..755 554 30.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:47:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10719-PA 778 GE10719-PA 1..778 1..778 4143 98.3 Plus
Dyak\GE10840-PA 734 GE10840-PA 202..688 265..755 548 29.6 Plus