BDGP Sequence Production Resources |
Search the DGRC for GH11690
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 116 |
Well: | 90 |
Vector: | pOT2 |
Associated Gene/Transcript | sip1-RA |
Protein status: | GH11690.pep: gold |
Preliminary Size: | 1697 |
Sequenced Size: | 2627 |
Gene | Date | Evidence |
---|---|---|
CG7238 | 2000-02-14 | Blastp of sequenced clone |
CG7238 | 2003-01-01 | Sim4 clustering to Release 3 |
sip1 | 2008-04-29 | Release 5.5 accounting |
sip1 | 2008-08-15 | Release 5.9 accounting |
sip1 | 2008-12-18 | 5.12 accounting |
2627 bp (2627 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145670
> GH11690.complete TTTGTTTACATTCACAAAAGTTTCAGTTTCTGCTGTAAGTAATATATACA CGTCTAGCCAGGATGTCGGACAACGATTACGAGCGTTTCGAGATAACGGA CTACGATCTGGACAATGAGTTCAACATCAATCGGCCCCGAGGCCGCCAGA GCAGGCACCAACAGATCTACGGTATTTGGGCGGATGACAGCGAGGAGGAG AGTGGTGGCGAGGGCGGAACTAAGAGAAGGGGGCGCGCCGCCCGTAAACC CAAAGACTACACCATGCCCGTCAATTTTGTGGCCGGCGGCATTCAGCAGG CGGGCAAAAAGAAGAAGAAGGCGCTCCAAGCCGATGATGAGAAAGGATCG CAAAAAGAGGGAGCAGAGGCTGACCAGGGCGAGGAGAGCGACGATTCCGC CGCCAGCGGACGGCCAGCCTTCGGCCAGAACGATCCGGGCAGCTCCAACA GCTCATCAGAAGAGGAGAGGCCAACGCTGAGCCGGAAACAGCCAAGCACC ACATTTCAGCATCGCTCCCACATCGCCAGCGAGCGCAACGTGGGCGCCTG GGAGCAGCATACACGCGGCATTGGAGCTAAGCTACTCCTTCAAATGGGCT ATGAGCCTGGCAAGGGTTTGGGCAAAGATCTGCAGGGCATTTCGCATCCT GTGCAAGCCCATGTCCGCAAGGGCAGAGGTGCTATCGGCGCCTATGGACC CGAAACTGCGGCAAGCATCGGAGGAAAGACGAACAAGAGCATCAAAGTGG ATGAGGACGTGCGCGAGGCGAAAGAGTTCAAAGACCAGCTGAACAAGTGG CGAAAGGGCTCAGCCGGTGGCGCCGAACCAATGGAGCGGCAGGGTAAGCG CTACTACTACAAGTCCGTGGAGGAGGTGATTGCCAAGGGTCACACGTCCG GCCACCTACTGTCGGAGAAGCTAAGCAAGAAACTGGGCAATGTGCGGGTG ATCGATATGACAGGCCCAGAGAAACGAGTGCTGAGTGGCTATCATGCCTT GGGACAGGCAAAAATTACGCCAGAGGAGACGCTCTACGACACGGAGGCGA CGGAAAAGGGATCCGCTCCCGCCTGCGTTTTTGCCATGCCCGAGCTGACG CACAACCTCCAGCTCTTGGTTAGCCAGTGCGAGCAGCAGATCATCGCCAT CGACAACCAGGAACGCGAGTGTTCCAGCCAGCAGGCAGCGCTGGAAAGCG AGCACCGGAAACTGGAGGAGATAGTCCAGCTAGAACGAAACCACATACGC ACGCTGGAGGAATCGTTGGAGCGCGTGGAGCGGTTAATCGATAATCCAGA CTTGAGTTTACCTCAGGCTGAACGACTCTTTCGGGAGCTGCTCGTGGACT ACGCTGCCGAATTCCATGAGTTCGGACTTGCAGATCTGGCAGCCGGTGTA ATAGCGCCGCTCCTGAAGCGAGAACTAGTTCAGTGGCAGCCACTGGAAAA CCCAACGGAACCGCTGCCACTCATCAAGAAATGGCGCGGCATGCTCCAGC AAGGAGATGCAGCAGAGCAGCAGCCCCGCAACGTCTTCGATCCGTACTCC TCGCTCATCTGGGCCGGCGTGATGCCTTCGTTTCGGTCCAGCGCTGCCGC ATGGCAGCCGAAGGAGCATCCGCCAATGGCTTCACTCCTAGATGCCTGGG CACCCCTGCTACCTAGCTGGGTCTTGGATTCGGTTCTCGAGCAACTGGTT CTGCCACGACTGGTGGCTGGTGTCCAGGAGTGGGATCCGCTCACCGACAC CGTTCCGATCGACAGTTGGGTGCTGCCGTGGCATGCCATCTTGGGCAGCA AGCTGGAGGAGGCCGTCTATCCTCAGATCCGCAGCAAATTGGGTATAGCA TTGCGCGCCTGGTCACCGCATGACCGATCAGCCAGAGCCATGCTTACGCC CTGGCAGAAGGCCTTCCCCGAGGAAGAGATGCAAGAGTTCCTGCAGCGGT ACATAGTGCCCAAACTGCAGGCGACTCTAGGCGAGCTCATCATCAATCCA ATGCACCAGGACCTGGAGCTGTGGCAGCAGGTATGGGAGTGGCACGAGCT CATCGATCCCATGTACATGGCCCAACTACTGGACAGACACTTCTTCCCGC GCTGGATGCAAGTGCTCGTCGTCTGGCTGAATCAGTCGCCGGACTACGCG GAGATCTCGCGATGGTACACCGGCTGGAAGAGCATGTTGAGCGAACCGCT TCTGCGCGAGCCCAGCGTTAAAGAGCATCTGCGGCGAGCACTGGAAATTA TGCACAGAGCCAGCGATACCCTGCTGCAGCCCACGGTGACGCCCACGCCC CCGCCTCCAGTTCCTCCGGCTCCAGTCATAATGATGGACCTGATTCATCC GCCCGCTCAGCTGGAGTTCAAAGAGTTGGTATCGCAGCAATGCGCCGACT TGGGAATCATCTTCGCTCCTCTGCCAGGGCGACGGGAGATGGGCAAACAG ATTTATCGTGTGGGAAAGCTGTTTTGCTACATCGATCGTCACGTCTGCAT GGTCAGCGATGGCAGCTTCAGCAACTGGAAGCCGGTGTCGCTAAATCATC TGCTAGAACGCTCTCAAACGGGAATTCTTTAAATAAATAGCTGCGAAAAT GTTTAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sip1_CG7238-RA | 2776 | sip1_CG7238-RA | 26..2631 | 1..2606 | 13030 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5720403..5722682 | 171..2450 | 11130 | 99.2 | Plus |
chr2L | 23010047 | chr2L | 5720182..5720356 | 1..175 | 875 | 100 | Plus |
chr2L | 23010047 | chr2L | 5722742..5722899 | 2447..2604 | 775 | 99.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5720182..5720352 | 1..171 | 100 | -> | Plus |
chr2L | 5720404..5722682 | 172..2450 | 99 | -> | Plus |
chr2L | 5722746..5722899 | 2451..2604 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip1-RA | 1..2520 | 63..2582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip1-RA | 1..2520 | 63..2582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip1-RA | 1..2520 | 63..2582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip1-RA | 1..2520 | 63..2582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip1-RA | 1..2520 | 63..2582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip1-RA | 16..2619 | 1..2604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip1-RA | 36..2639 | 1..2604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip1-RA | 24..2627 | 1..2604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip1-RA | 16..2619 | 1..2604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sip1-RA | 24..2627 | 1..2604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5721296..5723574 | 172..2450 | 100 | -> | Plus |
2L | 5723638..5723791 | 2451..2604 | 100 | Plus | |
2L | 5721074..5721244 | 1..171 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5721296..5723574 | 172..2450 | 100 | -> | Plus |
2L | 5723638..5723791 | 2451..2604 | 100 | Plus | |
2L | 5721074..5721244 | 1..171 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5721296..5723574 | 172..2450 | 100 | -> | Plus |
2L | 5723638..5723791 | 2451..2604 | 100 | Plus | |
2L | 5721074..5721244 | 1..171 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5721074..5721244 | 1..171 | 100 | -> | Plus |
arm_2L | 5721296..5723574 | 172..2450 | 100 | -> | Plus |
arm_2L | 5723638..5723791 | 2451..2604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5721296..5723574 | 172..2450 | 100 | -> | Plus |
2L | 5723638..5723791 | 2451..2604 | 100 | Plus | |
2L | 5721074..5721244 | 1..171 | 100 | -> | Plus |
Translation from 62 to 2581
> GH11690.pep MSDNDYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGE GGTKRRGRAARKPKDYTMPVNFVAGGIQQAGKKKKKALQADDEKGSQKEG AEADQGEESDDSAASGRPAFGQNDPGSSNSSSEEERPTLSRKQPSTTFQH RSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISHPVQAH VRKGRGAIGAYGPETAASIGGKTNKSIKVDEDVREAKEFKDQLNKWRKGS AGGAEPMERQGKRYYYKSVEEVIAKGHTSGHLLSEKLSKKLGNVRVIDMT GPEKRVLSGYHALGQAKITPEETLYDTEATEKGSAPACVFAMPELTHNLQ LLVSQCEQQIIAIDNQERECSSQQAALESEHRKLEEIVQLERNHIRTLEE SLERVERLIDNPDLSLPQAERLFRELLVDYAAEFHEFGLADLAAGVIAPL LKRELVQWQPLENPTEPLPLIKKWRGMLQQGDAAEQQPRNVFDPYSSLIW AGVMPSFRSSAAAWQPKEHPPMASLLDAWAPLLPSWVLDSVLEQLVLPRL VAGVQEWDPLTDTVPIDSWVLPWHAILGSKLEEAVYPQIRSKLGIALRAW SPHDRSARAMLTPWQKAFPEEEMQEFLQRYIVPKLQATLGELIINPMHQD LELWQQVWEWHELIDPMYMAQLLDRHFFPRWMQVLVVWLNQSPDYAEISR WYTGWKSMLSEPLLREPSVKEHLRRALEIMHRASDTLLQPTVTPTPPPPV PPAPVIMMDLIHPPAQLEFKELVSQQCADLGIIFAPLPGRREMGKQIYRV GKLFCYIDRHVCMVSDGSFSNWKPVSLNHLLERSQTGIL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14307-PA | 846 | GF14307-PA | 1..846 | 1..839 | 3549 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25092-PA | 839 | GG25092-PA | 1..839 | 1..839 | 4017 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10693-PA | 866 | GH10693-PA | 1..866 | 1..839 | 2958 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sip1-PB | 839 | CG7238-PB | 1..839 | 1..839 | 4429 | 100 | Plus |
sip1-PA | 839 | CG7238-PA | 1..839 | 1..839 | 4429 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11229-PA | 852 | GI11229-PA | 1..852 | 1..839 | 3104 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\STIP-PA | 835 | GL26638-PA | 1..835 | 1..839 | 3331 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\STIP-PA | 835 | GA20203-PA | 1..835 | 1..839 | 3327 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\STIP-PA | 839 | GM18568-PA | 1..839 | 1..839 | 4312 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23359-PA | 751 | GD23359-PA | 1..751 | 1..839 | 3260 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12292-PA | 853 | GJ12292-PA | 1..853 | 1..839 | 3036 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15423-PA | 824 | GK15423-PA | 1..821 | 1..824 | 3110 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\STIP-PA | 839 | GE25592-PA | 1..839 | 1..839 | 4036 | 93.2 | Plus |
Translation from 62 to 2581
> GH11690.hyp MSDNDYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGE GGTKRRGRAARKPKDYTMPVNFVAGGIQQAGKKKKKALQADDEKGSQKEG AEADQGEESDDSAASGRPAFGQNDPGSSNSSSEEERPTLSRKQPSTTFQH RSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISHPVQAH VRKGRGAIGAYGPETAASIGGKTNKSIKVDEDVREAKEFKDQLNKWRKGS AGGAEPMERQGKRYYYKSVEEVIAKGHTSGHLLSEKLSKKLGNVRVIDMT GPEKRVLSGYHALGQAKITPEETLYDTEATEKGSAPACVFAMPELTHNLQ LLVSQCEQQIIAIDNQERECSSQQAALESEHRKLEEIVQLERNHIRTLEE SLERVERLIDNPDLSLPQAERLFRELLVDYAAEFHEFGLADLAAGVIAPL LKRELVQWQPLENPTEPLPLIKKWRGMLQQGDAAEQQPRNVFDPYSSLIW AGVMPSFRSSAAAWQPKEHPPMASLLDAWAPLLPSWVLDSVLEQLVLPRL VAGVQEWDPLTDTVPIDSWVLPWHAILGSKLEEAVYPQIRSKLGIALRAW SPHDRSARAMLTPWQKAFPEEEMQEFLQRYIVPKLQATLGELIINPMHQD LELWQQVWEWHELIDPMYMAQLLDRHFFPRWMQVLVVWLNQSPDYAEISR WYTGWKSMLSEPLLREPSVKEHLRRALEIMHRASDTLLQPTVTPTPPPPV PPAPVIMMDLIHPPAQLEFKELVSQQCADLGIIFAPLPGRREMGKQIYRV GKLFCYIDRHVCMVSDGSFSNWKPVSLNHLLERSQTGIL*