BDGP Sequence Production Resources |
Search the DGRC for GH11727
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 117 |
Well: | 27 |
Vector: | pOT2 |
Associated Gene/Transcript | Gadd34-RA |
Protein status: | GH11727.pep: gold |
Preliminary Size: | 1569 |
Sequenced Size: | 1576 |
Gene | Date | Evidence |
---|---|---|
CG3825 | 2001-01-01 | Release 2 assignment |
CG3825 | 2001-07-04 | Blastp of sequenced clone |
CG3825 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3825 | 2008-04-29 | Release 5.5 accounting |
CG3825 | 2008-08-15 | Release 5.9 accounting |
CG3825 | 2008-12-18 | 5.12 accounting |
1576 bp (1576 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051450
> GH11727.complete AACTATTCTGGTATAAAACGTGTAAAACTCTGAATATTATTGTGCCTGGA CTCTATATCTCGCTATATACGCTACAAACGAAAGCAGAACTAGCCTACAA CTGAAAAACAGTAAAGTGCAAAGGATCGGATGCACGACATACGTAACATT TCACCATATATGTGCGTTATTTCACTCCATATTACATTAGTTAATCGCAG TAACCATGGATAAGTGTGTTTCAAATTAAGCTGGCCACCATGCCCCCCAA AGCCAAGTTCAAGAAAATGGCCATTCGCAAGGGATTCCCACCACACCAAA CGCATACTTGTGTCTTTAAGTTCAGATGTCGAAATTTCACACCCTTATGG GCGCACTGTTTGACCCCTTCCTCTTTGTTCTCCGCCTGATTGCAAACATG AGTTCCCCTATCTACGAGCAATATCGGTTCGGGCCGTCACGTCCCCTCTC CGCTGGATCACGTACACTGTGGAAGCCAAACAAGGTGCATCAGGAGGCAC CCGAGGTCAAACCGCTCGAAGTCCCCGAGGATTTGCGGATCCCAACCCTG CAGCCAGACCCCCTGAATCCGCTGGCCACCATGATGTCTTTCAAGCTAAT GGCTATGGACGTAGTAACTCAAATGCAGACCGCCCTGCACAAGTGCGTCA ACGCCCAGAGTCCGCCGGGCGCCAAGATGGCGGGAATCGAGTTGGACGCC TTGCGGCGTTGCGTACCGTCCTCGTGCTACTTCTTTATTGACCTGCATCC GCACCACGGCTTTAAGGATACCGCGGAGGATTGCCCTACTAGTCAAGCCT CCAGTGACCGGAATAACAACGCTGGCTGTTCGCAAGGATCGGCTGCCAAG AGCTCCTGGCAGCGGCAGCGTAGTATTTCCGAGTGCAGTGAGGACAGCTT CATTTGCTTTGAGGACGACGCAGAGCAGGCGGATGAGGATGTCGAGGAAG ACGAGGATGATGATGACGACGACAGCAGCGTGCAGTTTACAGCATGCGGT GAGGATGAAAATACCGAGGAGCTAAAGGCCTGCCAGTGCAGCGACGACAG CTCGACTCCTGTCAAGAAGGTTCGTTTCAACATGAAACCCGAAGTTCACG TAATGCTCGCCTGGGACTACGCTTATCGGGCTGCCAGAAAGAGCGAATGG CAGGTAATGGCGCGAGATCGGGATCGCTTTCAGCAGCGGATTCGGCGGAT TTCACCCATTCTCAATGCCGTCCTGACTCCAGTTCACCGAGATCGTGTCT ACCAAGCTCGATTCTTGCACGAGGACTAGCTGGTCCGCATACCTGAAGTA ACTTTTGATGTACAGATTACAGTTTAGAACGATTACAGCATTAAATTCCA AGTTGTTTGCGTGTATAAAGTGATCGATTTAGCCACTGCGTTCGTGATTG ATTTTATGAAGCCAAAAACTGTTTAACCTGTAAAGTATATCAAAACCACG TACACTTTTCTTCGCCTTTAGTTTTAGAGCCCTAAGAAGTTTGAATTTGT TGATAACGGGATTAGCATATACCTTAATATAACTTGAAATAAATTAAGCA ATAGACGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
accord2 | 7650 | accord2 QBERT 7650bp | 5490..5545 | 107..53 | 124 | 71.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19861679..19862167 | 1070..1558 | 100 | <- | Minus |
chr2R | 19862228..19863296 | 1..1069 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3825-RA | 1..954 | 326..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3825-RA | 1..954 | 326..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gadd34-RA | 1..954 | 326..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3825-RA | 1..954 | 326..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gadd34-RA | 1..954 | 326..1279 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3825-RA | 63..1618 | 1..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3825-RA | 63..1618 | 1..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gadd34-RA | 40..1597 | 1..1558 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3825-RA | 63..1618 | 1..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gadd34-RA | 40..1597 | 1..1558 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23975599..23976087 | 1070..1558 | 100 | <- | Minus |
2R | 23976148..23977216 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23975599..23976087 | 1070..1558 | 100 | <- | Minus |
2R | 23976148..23977216 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23975599..23976087 | 1070..1558 | 100 | <- | Minus |
2R | 23976148..23977216 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19863122..19863610 | 1070..1558 | 100 | <- | Minus |
arm_2R | 19863671..19864739 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23976816..23977304 | 1070..1558 | 100 | <- | Minus |
2R | 23977365..23978433 | 1..1069 | 100 | Minus |
Translation from 325 to 1278
> GH11727.pep MSKFHTLMGALFDPFLFVLRLIANMSSPIYEQYRFGPSRPLSAGSRTLWK PNKVHQEAPEVKPLEVPEDLRIPTLQPDPLNPLATMMSFKLMAMDVVTQM QTALHKCVNAQSPPGAKMAGIELDALRRCVPSSCYFFIDLHPHHGFKDTA EDCPTSQASSDRNNNAGCSQGSAAKSSWQRQRSISECSEDSFICFEDDAE QADEDVEEDEDDDDDDSSVQFTACGEDENTEELKACQCSDDSSTPVKKVR FNMKPEVHVMLAWDYAYRAARKSEWQVMARDRDRFQQRIRRISPILNAVL TPVHRDRVYQARFLHED*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12046-PA | 309 | GF12046-PA | 1..305 | 1..317 | 828 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19970-PA | 315 | GG19970-PA | 1..315 | 1..317 | 1473 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20179-PA | 287 | GH20179-PA | 63..284 | 72..314 | 372 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PPP1R15-PA | 317 | CG3825-PA | 1..317 | 1..317 | 1688 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20700-PA | 277 | GI20700-PA | 1..274 | 12..314 | 480 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10438-PA | 303 | GL10438-PA | 1..299 | 1..313 | 824 | 57.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17713-PA | 303 | GA17713-PA | 1..299 | 1..313 | 826 | 57.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15484-PA | 317 | GM15484-PA | 1..317 | 1..317 | 1549 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24987-PA | 317 | GD24987-PA | 1..317 | 1..317 | 1659 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21892-PA | 69 | GJ21892-PA | 1..66 | 249..314 | 272 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15845-PA | 318 | GK15845-PA | 1..316 | 1..313 | 596 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11502-PA | 323 | GE11502-PA | 1..323 | 1..317 | 1429 | 88.9 | Plus |
Translation from 325 to 1278
> GH11727.hyp MSKFHTLMGALFDPFLFVLRLIANMSSPIYEQYRFGPSRPLSAGSRTLWK PNKVHQEAPEVKPLEVPEDLRIPTLQPDPLNPLATMMSFKLMAMDVVTQM QTALHKCVNAQSPPGAKMAGIELDALRRCVPSSCYFFIDLHPHHGFKDTA EDCPTSQASSDRNNNAGCSQGSAAKSSWQRQRSISECSEDSFICFEDDAE QADEDVEEDEDDDDDDSSVQFTACGEDENTEELKACQCSDDSSTPVKKVR FNMKPEVHVMLAWDYAYRAARKSEWQVMARDRDRFQQRIRRISPILNAVL TPVHRDRVYQARFLHED*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gadd34-PA | 317 | CG3825-PA | 1..317 | 1..317 | 1688 | 100 | Plus |