BDGP Sequence Production Resources |
Search the DGRC for GH11740
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 117 |
Well: | 40 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17027-RA |
Protein status: | GH11740.pep: gold |
Preliminary Size: | 941 |
Sequenced Size: | 1383 |
Gene | Date | Evidence |
---|---|---|
CG17027 | 2001-01-01 | Release 2 assignment |
CG17027 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17027 | 2003-03-19 | Blastp of sequenced clone |
CG17027 | 2008-04-29 | Release 5.5 accounting |
CG17027 | 2008-08-15 | Release 5.9 accounting |
CG17027 | 2008-12-18 | 5.12 accounting |
1383 bp (1383 high quality bases) assembled on 2003-03-19
GenBank Submission: AY069101
> GH11740.complete CTCCGATTAGTTGACATCGCGAGCTGAGCAGCGACGGATCGTTTTTTGCC CAAAGGAATACGCATAGAAGCAAGATGGCAGGAGTAAGTCAAGCTGATAT CGAGGAGTTGTACAACTTTATCCATCCCCTGGCCATCAAAGCGGGCGAGA TCCTCATGGAGGGCTACGAGATGGCCAGTAAAAACGTCTCAATCAAAGGC GATTTCTACGACGTGGTCACCGACTACGACAACAAGATTGAGGACTTTCT CATGGAGAAAATATTGGCCAGATACCCGGATCACAAGTTCATCGGCGAGG AGGAGACGGCTAAGAACAACAACGTGTCCGGAGAGCTGACGAATGCTCCC ACCTGGATCATAGATCCCATCGATGGAACTTCGAACTTTATCAAGCAGAT TCCACACGTTTGCGTTTCAATCGGTTTGGCAATCAACAAACAAATCGTAG TGGGAGTAATCAACAATCCTGTCCAGAAAAAGCTCTTCACAACGAAACTG GGCCAAGGCGCCTTTTGCAATGGCAAACCAATCCACGTGAGCAGCTGCGA GAGCGTTAAGGATGCCAATGTGGCCTACGAAGTGTCCCTGCTGCATGTCC ATTCGGTGGCCAACAAGCATATCAAAAGGATCTACCATGTGGGATTGAAT GCTAGACGACTTGTTGCCTACTCCTGTGTGGTGGATGAGCTGTGCATGGT GGCCGCTGGCAATCTGGATGCCTTCTACATTGAGGACATGTATCCCTGGG ATTGTGCCGCCGGCTCCCTGTTGGTTAAGGAGGCGGGAGGCGTGGTAACA CATCCCTTTGGCGGACCATTCGACATAATGAAGCCGGATCTAATCTGCGC CGGCACAGAGAAGTTGCGCAAGGAGATCGAAGACCTTCTGCGTAAGGGAG ACCAGGAGGAGTCCGTGGGAGGGAAGCCGGTGCAGAAGTAATTTAGGCAA GGCAACAACGATCTTAATTGAAAAGCTTGGGGTCAGCTGCACTGCCAATT GGCGCTCGAAGCTCTGCTAATGGGGAGCTTTCGGATATATTCCAGCTTTA ATCGCCGGCAGCTGTTCCACGATACACGTCAAAAAGGCGGGAAAGCCCGT CAATCTTGAGACTTTGAAAAACAACACCGTATGATACCATAATTTTAAGC ATTTAGCTGGCAAACAACTTAATATACAGATTACCTACTTGGAAATTTAG TATTTCTATACTTATTCACAAAGTTTCACGAATTTCGTATTGTTTATACC TTTTTCATATAGCATCCCTCAGAAAAATGTTAGTCTAACATGGAATTTAG ATATTTATGTACCCATATCTGTATATAGAGTAAAGTAAATAAAGAAATTT AAAGAAATCCTTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17027-RA | 1775 | CG17027-RA | 412..1775 | 1..1364 | 6820 | 100 | Plus |
CG17026-RA | 1215 | CG17026-RA | 391..606 | 332..547 | 510 | 82.4 | Plus |
CG17026-RA | 1215 | CG17026-RA | 671..824 | 612..765 | 365 | 82.4 | Plus |
CG17026-RA | 1215 | CG17026-RA | 275..363 | 216..304 | 205 | 82 | Plus |
CG17026-RA | 1215 | CG17026-RA | 839..920 | 780..861 | 200 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15970989..15971692 | 658..1362 | 3430 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 15970100..15970757 | 1..658 | 3290 | 100 | Plus |
chr3L | 24539361 | chr3L | 15965410..15965850 | 216..656 | 735 | 77.8 | Plus |
chr3L | 24539361 | chr3L | 15965928..15966112 | 677..861 | 355 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15981184..15981890 | 658..1364 | 3535 | 100 | Plus |
3L | 28110227 | 3L | 15980296..15980953 | 1..658 | 3290 | 100 | Plus |
3L | 28110227 | 3L | 15975599..15976039 | 216..656 | 735 | 77.8 | Plus |
3L | 28110227 | 3L | 15976117..15976301 | 677..861 | 355 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15974284..15974990 | 658..1364 | 3535 | 100 | Plus |
3L | 28103327 | 3L | 15973396..15974053 | 1..658 | 3290 | 100 | Plus |
3L | 28103327 | 3L | 15968815..15969030 | 332..547 | 510 | 82.4 | Plus |
3L | 28103327 | 3L | 15969217..15969305 | 677..765 | 235 | 84.2 | Plus |
3L | 28103327 | 3L | 15968699..15968787 | 216..304 | 205 | 82 | Plus |
3L | 28103327 | 3L | 15969320..15969401 | 780..861 | 200 | 82.9 | Plus |
3L | 28103327 | 3L | 15969095..15969139 | 612..656 | 150 | 88.8 | Plus |
3L | 28103327 | 3L | 15970434..15970474 | 333..373 | 145 | 90.2 | Plus |
3L | 28103327 | 3L | 15971901..15971944 | 333..376 | 145 | 88.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15970100..15970757 | 1..658 | 100 | -> | Plus |
chr3L | 15970990..15971692 | 659..1362 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17027-RA | 1..867 | 75..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17027-RA | 1..867 | 75..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17027-RA | 1..867 | 75..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17027-RA | 1..867 | 75..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17027-RA | 1..867 | 75..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17027-RA | 341..1702 | 1..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17027-RA | 1..1362 | 1..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17027-RA | 1..1362 | 1..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17027-RA | 341..1702 | 1..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17027-RA | 1..1362 | 1..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15980296..15980953 | 1..658 | 100 | -> | Plus |
3L | 15981185..15981888 | 659..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15980296..15980953 | 1..658 | 100 | -> | Plus |
3L | 15981185..15981888 | 659..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15980296..15980953 | 1..658 | 100 | -> | Plus |
3L | 15981185..15981888 | 659..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15973396..15974053 | 1..658 | 100 | -> | Plus |
arm_3L | 15974285..15974988 | 659..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15973396..15974053 | 1..658 | 100 | -> | Plus |
3L | 15974285..15974988 | 659..1362 | 100 | Plus |
Translation from 74 to 940
> GH11740.pep MAGVSQADIEELYNFIHPLAIKAGEILMEGYEMASKNVSIKGDFYDVVTD YDNKIEDFLMEKILARYPDHKFIGEEETAKNNNVSGELTNAPTWIIDPID GTSNFIKQIPHVCVSIGLAINKQIVVGVINNPVQKKLFTTKLGQGAFCNG KPIHVSSCESVKDANVAYEVSLLHVHSVANKHIKRIYHVGLNARRLVAYS CVVDELCMVAAGNLDAFYIEDMYPWDCAAGSLLVKEAGGVVTHPFGGPFD IMKPDLICAGTEKLRKEIEDLLRKGDQEESVGGKPVQK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24105-PA | 288 | GF24105-PA | 1..288 | 1..288 | 1415 | 91 | Plus |
Dana\GF24102-PA | 286 | GF24102-PA | 2..286 | 3..286 | 1192 | 76.5 | Plus |
Dana\GF24103-PA | 284 | GF24103-PA | 5..277 | 4..277 | 736 | 48.5 | Plus |
Dana\GF24104-PA | 284 | GF24104-PA | 5..277 | 4..277 | 608 | 41.6 | Plus |
Dana\GF10177-PA | 277 | GF10177-PA | 6..263 | 8..268 | 442 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15939-PA | 288 | GG15939-PA | 1..288 | 1..288 | 1496 | 97.6 | Plus |
Dere\GG15937-PA | 284 | GG15937-PA | 5..283 | 6..283 | 1178 | 76.7 | Plus |
Dere\GG15938-PA | 284 | GG15938-PA | 3..277 | 2..277 | 726 | 46.7 | Plus |
Dere\GG13252-PA | 278 | GG13252-PA | 6..270 | 8..274 | 453 | 36.7 | Plus |
Dere\GG13251-PA | 602 | GG13251-PA | 278..546 | 5..274 | 416 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14776-PA | 290 | GH14776-PA | 3..286 | 7..283 | 1253 | 82 | Plus |
Dgri\GH14774-PA | 289 | GH14774-PA | 7..281 | 9..282 | 1147 | 76.7 | Plus |
Dgri\GH14775-PA | 286 | GH14775-PA | 7..279 | 4..277 | 714 | 46.7 | Plus |
Dgri\GH14777-PA | 286 | GH14777-PA | 3..279 | 2..277 | 591 | 41.7 | Plus |
Dgri\GH16522-PA | 278 | GH16522-PA | 6..270 | 8..274 | 446 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17027-PB | 288 | CG17027-PB | 1..288 | 1..288 | 1510 | 100 | Plus |
CG17027-PA | 288 | CG17027-PA | 1..288 | 1..288 | 1510 | 100 | Plus |
CG17026-PA | 284 | CG17026-PA | 4..284 | 5..284 | 1170 | 77.6 | Plus |
CG17029-PB | 284 | CG17029-PB | 3..277 | 2..277 | 713 | 46.7 | Plus |
CG17029-PA | 284 | CG17029-PA | 3..277 | 2..277 | 713 | 46.7 | Plus |
CG17028-PB | 284 | CG17028-PB | 5..277 | 4..277 | 633 | 41.6 | Plus |
CG17028-PA | 284 | CG17028-PA | 5..277 | 4..277 | 633 | 41.6 | Plus |
CG9391-PC | 278 | CG9391-PC | 6..268 | 8..272 | 455 | 37.7 | Plus |
CG9391-PA | 278 | CG9391-PA | 6..268 | 8..272 | 455 | 37.7 | Plus |
CG9389-PA | 596 | CG9389-PA | 272..540 | 5..274 | 409 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11878-PA | 282 | GI11878-PA | 3..279 | 7..283 | 1296 | 86.3 | Plus |
Dmoj\GI11876-PA | 287 | GI11876-PA | 4..284 | 5..284 | 1157 | 74.4 | Plus |
Dmoj\GI11877-PA | 283 | GI11877-PA | 1..276 | 1..277 | 703 | 45.8 | Plus |
Dmoj\GI11880-PA | 284 | GI11880-PA | 7..277 | 6..277 | 605 | 43 | Plus |
Dmoj\GI12203-PA | 278 | GI12203-PA | 6..270 | 8..274 | 467 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12746-PA | 284 | GL12746-PA | 10..284 | 14..288 | 1336 | 89.8 | Plus |
Dper\GL12743-PA | 287 | GL12743-PA | 2..283 | 3..283 | 1174 | 76.6 | Plus |
Dper\GL12744-PA | 258 | GL12744-PA | 6..254 | 4..280 | 635 | 44.4 | Plus |
Dper\GL12745-PA | 286 | GL12745-PA | 6..279 | 4..277 | 614 | 40 | Plus |
Dper\GL24596-PA | 278 | GL24596-PA | 6..270 | 8..274 | 479 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14279-PA | 292 | GA14279-PA | 6..292 | 2..288 | 1366 | 87.8 | Plus |
Dpse\GA14278-PA | 287 | GA14278-PA | 2..283 | 3..283 | 1178 | 76.6 | Plus |
Dpse\GA14281-PA | 285 | GA14281-PA | 6..281 | 4..280 | 727 | 47.7 | Plus |
Dpse\GA28212-PA | 286 | GA28212-PA | 6..279 | 4..277 | 615 | 40.4 | Plus |
Dpse\GA23361-PA | 278 | GA23361-PA | 6..270 | 8..274 | 489 | 38.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25570-PA | 288 | GM25570-PA | 1..288 | 1..288 | 1483 | 96.5 | Plus |
Dsec\GM25567-PA | 284 | GM25567-PA | 2..284 | 3..284 | 1179 | 76.3 | Plus |
Dsec\GM25568-PA | 284 | GM25568-PA | 3..277 | 2..277 | 717 | 46 | Plus |
Dsec\GM25569-PA | 284 | GM25569-PA | 5..277 | 4..277 | 654 | 42.7 | Plus |
Dsec\GM22155-PA | 592 | GM22155-PA | 268..536 | 5..274 | 411 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14585-PA | 288 | GD14585-PA | 1..288 | 1..288 | 1499 | 97.6 | Plus |
Dsim\GD14582-PA | 284 | GD14582-PA | 2..284 | 3..284 | 1184 | 76.7 | Plus |
Dsim\GD14583-PA | 284 | GD14583-PA | 3..277 | 2..277 | 717 | 46 | Plus |
Dsim\GD14584-PA | 284 | GD14584-PA | 5..277 | 4..277 | 658 | 42.7 | Plus |
Dsim\GD12132-PA | 278 | GD12132-PA | 6..270 | 8..274 | 429 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13574-PA | 356 | GJ13574-PA | 2..269 | 6..273 | 1254 | 84.7 | Plus |
Dvir\GJ13572-PA | 282 | GJ13572-PA | 3..279 | 9..284 | 1140 | 74.7 | Plus |
Dvir\GJ13573-PA | 285 | GJ13573-PA | 6..278 | 4..277 | 699 | 46 | Plus |
Dvir\GJ11436-PA | 278 | GJ11436-PA | 6..270 | 8..274 | 445 | 38.3 | Plus |
Dvir\GJ11435-PA | 616 | GJ11435-PA | 306..549 | 8..252 | 438 | 37.7 | Plus |
Dvir\GJ13574-PA | 356 | GJ13574-PA | 266..349 | 192..277 | 192 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24484-PA | 290 | GK24484-PA | 4..286 | 5..287 | 1300 | 83.7 | Plus |
Dwil\GK24463-PA | 284 | GK24463-PA | 7..283 | 9..283 | 1111 | 73.3 | Plus |
Dwil\GK24473-PA | 281 | GK24473-PA | 3..274 | 5..277 | 690 | 46.5 | Plus |
Dwil\GK17369-PA | 279 | GK17369-PA | 2..271 | 3..274 | 487 | 38.8 | Plus |
Dwil\GK20398-PA | 704 | GK20398-PA | 329..588 | 8..268 | 423 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22878-PA | 288 | GE22878-PA | 1..288 | 1..288 | 1492 | 97.2 | Plus |
Dyak\GE22874-PA | 288 | GE22874-PA | 1..288 | 1..288 | 1486 | 96.9 | Plus |
Dyak\GE22871-PA | 284 | GE22871-PA | 2..284 | 3..284 | 1202 | 77 | Plus |
Dyak\GE22875-PA | 284 | GE22875-PA | 2..284 | 3..284 | 1199 | 77.4 | Plus |
Dyak\GE22872-PA | 284 | GE22872-PA | 3..277 | 2..277 | 722 | 46.7 | Plus |
Translation from 74 to 940
> GH11740.hyp MAGVSQADIEELYNFIHPLAIKAGEILMEGYEMASKNVSIKGDFYDVVTD YDNKIEDFLMEKILARYPDHKFIGEEETAKNNNVSGELTNAPTWIIDPID GTSNFIKQIPHVCVSIGLAINKQIVVGVINNPVQKKLFTTKLGQGAFCNG KPIHVSSCESVKDANVAYEVSLLHVHSVANKHIKRIYHVGLNARRLVAYS CVVDELCMVAAGNLDAFYIEDMYPWDCAAGSLLVKEAGGVVTHPFGGPFD IMKPDLICAGTEKLRKEIEDLLRKGDQEESVGGKPVQK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17027-PB | 288 | CG17027-PB | 1..288 | 1..288 | 1510 | 100 | Plus |
CG17027-PA | 288 | CG17027-PA | 1..288 | 1..288 | 1510 | 100 | Plus |
CG17026-PA | 284 | CG17026-PA | 4..284 | 5..284 | 1170 | 77.6 | Plus |
CG17029-PB | 284 | CG17029-PB | 3..277 | 2..277 | 713 | 46.7 | Plus |
CG17029-PA | 284 | CG17029-PA | 3..277 | 2..277 | 713 | 46.7 | Plus |