BDGP Sequence Production Resources |
Search the DGRC for GH11752
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 117 |
Well: | 52 |
Vector: | pOT2 |
Associated Gene/Transcript | wupA-RB |
Protein status: | GH11752.pep: gold |
Sequenced Size: | 976 |
Gene | Date | Evidence |
---|---|---|
wupA-RB | 2010-11-11 | Gleaning Pick By Joe Carlson |
976 bp assembled on 2010-11-23
GenBank Submission: BT125791.1
> GH11752.complete TTCAGTCTTTTTGTGTCGTTCAGTATCATCCGATTCGTGTGATCGACAGC ATAGCCGAATTTTTTTTCTTTTTTTTCTAATTCCTTGAAGTAACCAAAAA CACAAATCAAAATGGCTGATGATGAGGCTAAGAAGGCTAAACAGGCTGAG ATCGAGCGCAAGCGTGCTGAGGTGCGCAAGCGCATGGAGGAAGCCTCCAA GGCCAAGAAGGCCAAGAAGGGTTTCATGACCCCAGAGAGGAAGAAGAAAC TCAGGTTGCTGCTGCGTAAGAAAGCCGCTGAGGAGCTGAAGAAAGAACAG GAACGCAAAGCGGCTGAACGTAGACGCATCATCGAAGAACGTTGCGGCAG TCCCAGGAATCTCAGCGATGCCAGCGAAGATACTATTCAGAGTGTTTGTA AGGACTACCACAGTAAGATACTGAAACTGGAGTCCGAAAAGTACGATTTC GAGTACGATGTAGCCAGAAAGGATTATGAGATCAACGATCTCAATGCCCA AGTTAACGATCTTCGCGGCAAGTTCGTCAAGCCAGCCCTGAAGAAGGTCT CCAAATACGAAAACAAATTCGCCAAGCTGCAGAAGAAGGCCGCTGAGTTC AACTTCCGCAACCAGCTCAAGGTGGTGAAGAAGAAGGAGTTCACGCTGGA GGAGGAGGAGAAGGAGAAGAAACCCGACTGGTCCAAGGGCAAGCCCGGAG ATGCCAAGGTGAAGGAGGAGGTTGAGGCCGAAGCTTAAGTGTCCACACGT CCACTAGTGTCCACTGACCCGTGACTCCCGCCCTAAACAATAATTGAAAT TATTTACAACAATTATCTGAAGCAATATAATTTATATGAATCTATTAATA TATATATATATCCGCAAATATATATGCATGTATATATCTCGCCATATATA TGTGTCCACAATGGATTTGATCAGAAATGAAGTCAATAAACAACAACAGC AACAACTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17995055..17995347 | 957..665 | 1465 | 100 | Minus |
chrX | 22417052 | chrX | 17995994..17996135 | 666..525 | 710 | 100 | Minus |
chrX | 22417052 | chrX | 18002767..18002897 | 255..125 | 655 | 100 | Minus |
chrX | 22417052 | chrX | 18002578..18002702 | 379..255 | 625 | 100 | Minus |
chrX | 22417052 | chrX | 18001259..18001361 | 480..378 | 515 | 100 | Minus |
chrX | 22417052 | chrX | 18006037..18006126 | 90..1 | 450 | 100 | Minus |
chrX | 22417052 | chrX | 17996201..17996246 | 524..479 | 230 | 100 | Minus |
chrX | 22417052 | chrX | 18003930..18003968 | 127..89 | 195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 18105739..18106034 | 960..665 | 1480 | 100 | Minus |
X | 23542271 | X | 18106681..18106822 | 666..525 | 710 | 100 | Minus |
X | 23542271 | X | 18113447..18113577 | 255..125 | 655 | 100 | Minus |
X | 23542271 | X | 18113258..18113382 | 379..255 | 625 | 100 | Minus |
X | 23542271 | X | 18111938..18112040 | 480..378 | 515 | 100 | Minus |
X | 23542271 | X | 18116707..18116796 | 90..1 | 450 | 100 | Minus |
X | 23542271 | X | 18106888..18106933 | 524..479 | 230 | 100 | Minus |
X | 23542271 | X | 18114610..18114648 | 127..89 | 195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 18113837..18114132 | 960..665 | 1480 | 100 | Minus |
X | 23527363 | X | 18114779..18114920 | 666..525 | 710 | 100 | Minus |
X | 23527363 | X | 18121545..18121675 | 255..125 | 655 | 100 | Minus |
X | 23527363 | X | 18121356..18121480 | 379..255 | 625 | 100 | Minus |
X | 23527363 | X | 18120036..18120138 | 480..378 | 515 | 100 | Minus |
X | 23527363 | X | 18124805..18124894 | 90..1 | 450 | 100 | Minus |
X | 23527363 | X | 18114986..18115031 | 524..479 | 230 | 100 | Minus |
X | 23527363 | X | 18122708..18122746 | 127..89 | 195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 1993..2036 | 911..953 | 109 | 75 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 17995188..17995345 | 667..824 | 100 | <- | Minus |
chrX | 17995994..17996135 | 525..666 | 100 | <- | Minus |
chrX | 17996201..17996244 | 481..524 | 100 | <- | Minus |
chrX | 18001259..18001359 | 380..480 | 100 | <- | Minus |
chrX | 18002578..18002701 | 256..379 | 100 | <- | Minus |
chrX | 18002767..18002895 | 127..255 | 100 | <- | Minus |
chrX | 18003931..18003966 | 91..126 | 100 | <- | Minus |
chrX | 18006037..18006126 | 1..90 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RB | 1..627 | 112..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RB | 1..627 | 112..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RB | 1..627 | 112..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RB | 1..627 | 112..738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RB | 27..983 | 1..957 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RB | 27..983 | 1..957 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RB | 30..986 | 1..957 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wupA-RB | 30..986 | 1..957 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18105742..18106032 | 667..957 | 100 | <- | Minus |
X | 18106681..18106822 | 525..666 | 100 | <- | Minus |
X | 18106888..18106931 | 481..524 | 100 | <- | Minus |
X | 18111938..18112038 | 380..480 | 100 | <- | Minus |
X | 18113258..18113381 | 256..379 | 100 | <- | Minus |
X | 18113447..18113575 | 127..255 | 100 | <- | Minus |
X | 18114611..18114646 | 91..126 | 100 | <- | Minus |
X | 18116707..18116796 | 1..90 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18105742..18106032 | 667..957 | 100 | <- | Minus |
X | 18106681..18106822 | 525..666 | 100 | <- | Minus |
X | 18106888..18106931 | 481..524 | 100 | <- | Minus |
X | 18111938..18112038 | 380..480 | 100 | <- | Minus |
X | 18113258..18113381 | 256..379 | 100 | <- | Minus |
X | 18113447..18113575 | 127..255 | 100 | <- | Minus |
X | 18114611..18114646 | 91..126 | 100 | <- | Minus |
X | 18116707..18116796 | 1..90 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18105742..18106032 | 667..957 | 100 | <- | Minus |
X | 18106681..18106822 | 525..666 | 100 | <- | Minus |
X | 18106888..18106931 | 481..524 | 100 | <- | Minus |
X | 18111938..18112038 | 380..480 | 100 | <- | Minus |
X | 18113258..18113381 | 256..379 | 100 | <- | Minus |
X | 18113447..18113575 | 127..255 | 100 | <- | Minus |
X | 18114611..18114646 | 91..126 | 100 | <- | Minus |
X | 18116707..18116796 | 1..90 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18000921..18000964 | 481..524 | 100 | <- | Minus |
arm_X | 18005971..18006071 | 380..480 | 100 | <- | Minus |
arm_X | 18007291..18007414 | 256..379 | 100 | <- | Minus |
arm_X | 18007480..18007608 | 127..255 | 100 | <- | Minus |
arm_X | 18008644..18008679 | 91..126 | 100 | <- | Minus |
arm_X | 18010740..18010829 | 1..90 | 100 | Minus | |
arm_X | 17999775..18000065 | 667..957 | 100 | <- | Minus |
arm_X | 18000714..18000855 | 525..666 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18113840..18114130 | 667..957 | 100 | <- | Minus |
X | 18114779..18114920 | 525..666 | 100 | <- | Minus |
X | 18114986..18115029 | 481..524 | 100 | <- | Minus |
X | 18120036..18120136 | 380..480 | 100 | <- | Minus |
X | 18121356..18121479 | 256..379 | 100 | <- | Minus |
X | 18121545..18121673 | 127..255 | 100 | <- | Minus |
X | 18122709..18122744 | 91..126 | 100 | <- | Minus |
X | 18124805..18124894 | 1..90 | 100 | Minus |
Translation from 111 to 737
> GH11752.hyp MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLL LRKKAAEELKKEQERKAAERRRIIEERCGSPRNLSDASEDTIQSVCKDYH SKILKLESEKYDFEYDVARKDYEINDLNAQVNDLRGKFVKPALKKVSKYE NKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPDWSKGKPGDAKV KEEVEAEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wupA-PB | 208 | CG7178-PB | 1..208 | 1..208 | 1047 | 100 | Plus |
wupA-PA | 208 | CG7178-PA | 1..208 | 1..208 | 962 | 92.3 | Plus |
wupA-PF | 208 | CG7178-PF | 1..208 | 1..208 | 950 | 89.4 | Plus |
wupA-PC | 208 | CG7178-PC | 1..208 | 1..208 | 950 | 89.4 | Plus |
wupA-PE | 208 | CG7178-PE | 1..208 | 1..208 | 927 | 88.9 | Plus |
Translation from 111 to 737
> GH11752.pep MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLL LRKKAAEELKKEQERKAAERRRIIEERCGSPRNLSDASEDTIQSVCKDYH SKILKLESEKYDFEYDVARKDYEINDLNAQVNDLRGKFVKPALKKVSKYE NKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPDWSKGKPGDAKV KEEVEAEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19521-PA | 272 | GF19521-PA | 68..272 | 4..208 | 749 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18142-PA | 269 | GG18142-PA | 65..269 | 4..208 | 750 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11970-PA | 282 | GH11970-PA | 78..282 | 4..208 | 735 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wupA-PB | 208 | CG7178-PB | 1..208 | 1..208 | 1047 | 100 | Plus |
wupA-PA | 208 | CG7178-PA | 1..208 | 1..208 | 962 | 92.3 | Plus |
wupA-PF | 208 | CG7178-PF | 1..208 | 1..208 | 950 | 89.4 | Plus |
wupA-PC | 208 | CG7178-PC | 1..208 | 1..208 | 950 | 89.4 | Plus |
wupA-PG | 269 | CG7178-PG | 65..269 | 4..208 | 931 | 88.8 | Plus |
wupA-PE | 208 | CG7178-PE | 1..208 | 1..208 | 927 | 88.9 | Plus |
wupA-PD | 208 | CG7178-PD | 1..208 | 1..208 | 927 | 88.9 | Plus |
wupA-PJ | 199 | CG7178-PJ | 1..187 | 1..187 | 849 | 91.4 | Plus |
wupA-PM | 184 | CG7178-PM | 1..184 | 25..208 | 847 | 91.3 | Plus |
wupA-PL | 184 | CG7178-PL | 1..184 | 25..208 | 847 | 91.3 | Plus |
wupA-PK | 184 | CG7178-PK | 1..184 | 25..208 | 847 | 91.3 | Plus |
wupA-PH | 260 | CG7178-PH | 65..248 | 4..187 | 818 | 87.5 | Plus |
wupA-PI | 199 | CG7178-PI | 1..187 | 1..187 | 814 | 87.7 | Plus |
up-PM | 373 | CG7107-PM | 83..300 | 5..196 | 157 | 27.8 | Plus |
up-PL | 388 | CG7107-PL | 98..315 | 5..196 | 157 | 28.7 | Plus |
up-PN | 394 | CG7107-PN | 104..321 | 5..196 | 157 | 28.7 | Plus |
up-PK | 396 | CG7107-PK | 106..323 | 5..196 | 157 | 28.7 | Plus |
up-PG | 396 | CG7107-PG | 106..323 | 5..196 | 157 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14711-PA | 277 | GI14711-PA | 73..277 | 4..208 | 737 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14173-PA | 267 | GL14173-PA | 63..267 | 4..208 | 712 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\TpnI-PA | 267 | GA22383-PA | 63..267 | 4..208 | 712 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22835-PA | 224 | GM22835-PA | 65..224 | 4..208 | 580 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24482-PA | 98 | GD24482-PA | 13..97 | 6..90 | 392 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\wupA-PA | 274 | GJ16776-PA | 70..274 | 4..208 | 737 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24919-PA | 272 | GK24919-PA | 68..272 | 4..208 | 737 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\wupA-PA | 270 | GE15552-PA | 66..270 | 4..208 | 715 | 88.3 | Plus |