BDGP Sequence Production Resources |
Search the DGRC for GH11824
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 118 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12162-RA |
Protein status: | GH11824.pep: gold |
Preliminary Size: | 1604 |
Sequenced Size: | 1570 |
Gene | Date | Evidence |
---|---|---|
CG12162 | 2001-01-01 | Release 2 assignment |
CG12162 | 2001-11-08 | Blastp of sequenced clone |
CG12162 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12162 | 2008-04-29 | Release 5.5 accounting |
CG12162 | 2008-08-15 | Release 5.9 accounting |
CG12162 | 2008-12-18 | 5.12 accounting |
1570 bp (1570 high quality bases) assembled on 2001-11-08
GenBank Submission: AY069102
> GH11824.complete CAACATCAAAATGTTCATAACAATGTTGGGATTTTAGAGACAGCCACAAA ATTTAGAAGCACATGTGCCCTGCTAGATCGAACCGAACCTGAGAACTGAT CGCCGAAAGAAGCTGCAGATTGTTGCATAAACCGCGCGCGCAGCTACCGC TCCGAACTCGAAAAGGTGCTCCACGGGTCTCCGAGCTTTCCGAACTTTGG ATGCGCCGCGATGAGCTTGTTGGTGCAAGTGTTCAAGTGGGACCAGCGAT GTCCCATGCTCCACAGGGTGGACATCCTGCTGCGGCGTGGCGTCAAGAAG CAGGCGGTGTATCCGACCAAACTGGCTGAGGTGGGTCGCCTGGTGGATGC CCGCGACGACCGGTACGAGACGGGCCAACTATTCCTGCACCGCATCTTCG GCTACCGCGGCGTTATACTCTTCCCCTGGACAGCCCGCGTCTACGACCGG GATCTGCACAATCCTGGCAAGATTAGCGCCACCACGACTACGAGCGCCAA TCCGACGCAGCAGAACCGCACCAAAGAGGCTTCGCTCCGCGTGAAGGCCA ACACCTCCGCTTCCCCAACGGCTGCTACCGCTCAGAGCGCCGATGCCCCC ACCTCGACCGCCTTTGAGACGAACGCGGCTGAAAGTACAGGCACCACAAA CCTGGGTACCACCTCCCAAGTGGATCCCAAAGAGGTCAAGGGCAAGGTGC AAACCTTTTATCAGGTGCTCATAGACACCCGCGATTGCCCGTACATTCGC GCCCAGACCGAGGCGGTCACCTTTCTCGGCAACCAGGACTCCAACCGCAG CCTCTACGCCATCCCCGGGCTGGACTACGTGGCCCACGAGGACATCATGC CTTACAGCTCCAGCGAGAAGAGTCCGCTGCAGCACGAGCTGTTCGATAAG TTCCTTACGCACGCTCCGGACGCGGACCCGCCATTTGTGGGCCAGGACAC TCTGAAGGCGTGGCAGGAGAAGAACCATCCCTGGCTGGACATGAGCGATG TACACAAGGAGACCACGGAGAACGTGCGCATTACCGTGATTCCCTTCTAC ATGGGTTGCCGGGAGACGCCTGCTAGTTCGGTCTACTGGTGGCGCTACTG CATCCGACTGGAGAACCTCGGCGAGCTGAGCGTGCAGCTGCGCGAGCGCC ACTGGCGCATTTTCTCACTGTCTGGAACCCTGGAGACGGTGCGCGGAAGA GGAGTGGTGGGCCAGGAGCCCATTCTGAGCCCCCGGCTGCCCGCCTTTCA GTACAGCAGCCATGTGAGCCTGCAGGCTCCCAGCGGCCATATGTGGGGCA CCTTCCGGCTGGAGCGCGAAGACGGATACTCCTTCGATTGCAAGATTCCG CCCTTCTCACTGGAGAGCAAGCCGGACGACCTAGGGACGCCCACACCGGC CACGCCCAGTGCCCACGATAAAAAGCGCGACGATAGCGATTAAGAGGCAG TTGTTCACCCGTAGTTAAATGATTTTAAAACGCAATCTTTTCTGACAATG CATGCGTACATGTGTTTAGTGCAAATTACAATAATCAACAAGGAAAAAAA AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12162-RA | 1714 | CG12162-RA | 91..1634 | 1..1544 | 7720 | 100 | Plus |
CG12162-RB | 1744 | CG12162-RB | 441..1664 | 321..1544 | 6120 | 100 | Plus |
CG12162-RB | 1744 | CG12162-RB | 68..387 | 1..320 | 1600 | 100 | Plus |
mRpL44-RA | 1181 | mRpL44-RA | 1103..1181 | 1544..1466 | 395 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1294744..1295198 | 1089..1543 | 2275 | 100 | Plus |
chr3R | 27901430 | chr3R | 1293862..1294288 | 321..747 | 2135 | 100 | Plus |
chr3R | 27901430 | chr3R | 1294348..1294689 | 748..1089 | 1710 | 100 | Plus |
chr3R | 27901430 | chr3R | 1293489..1293808 | 1..320 | 1600 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5469085..5469540 | 1089..1544 | 2280 | 100 | Plus |
3R | 32079331 | 3R | 5468203..5468629 | 321..747 | 2135 | 100 | Plus |
3R | 32079331 | 3R | 5468689..5469030 | 748..1089 | 1710 | 100 | Plus |
3R | 32079331 | 3R | 5467830..5468149 | 1..320 | 1600 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5209916..5210371 | 1089..1544 | 2280 | 100 | Plus |
3R | 31820162 | 3R | 5209034..5209460 | 321..747 | 2135 | 100 | Plus |
3R | 31820162 | 3R | 5209520..5209861 | 748..1089 | 1710 | 100 | Plus |
3R | 31820162 | 3R | 5208661..5208980 | 1..320 | 1600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1293489..1293808 | 1..320 | 100 | -> | Plus |
chr3R | 1293862..1294288 | 321..747 | 100 | -> | Plus |
chr3R | 1294348..1294689 | 748..1089 | 100 | -> | Plus |
chr3R | 1294745..1295198 | 1090..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12162-RA | 1..1233 | 211..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12162-RA | 1..1233 | 211..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12162-RA | 1..1233 | 211..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12162-RA | 1..1233 | 211..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12162-RA | 1..1233 | 211..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12162-RA | 38..1580 | 1..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12162-RA | 38..1580 | 1..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12162-RA | 53..1595 | 1..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12162-RA | 38..1580 | 1..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12162-RA | 53..1595 | 1..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5467830..5468149 | 1..320 | 100 | -> | Plus |
3R | 5468203..5468629 | 321..747 | 100 | -> | Plus |
3R | 5468689..5469030 | 748..1089 | 100 | -> | Plus |
3R | 5469086..5469539 | 1090..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5467830..5468149 | 1..320 | 100 | -> | Plus |
3R | 5468203..5468629 | 321..747 | 100 | -> | Plus |
3R | 5468689..5469030 | 748..1089 | 100 | -> | Plus |
3R | 5469086..5469539 | 1090..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5467830..5468149 | 1..320 | 100 | -> | Plus |
3R | 5468203..5468629 | 321..747 | 100 | -> | Plus |
3R | 5468689..5469030 | 748..1089 | 100 | -> | Plus |
3R | 5469086..5469539 | 1090..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1293552..1293871 | 1..320 | 100 | -> | Plus |
arm_3R | 1293925..1294351 | 321..747 | 100 | -> | Plus |
arm_3R | 1294411..1294752 | 748..1089 | 100 | -> | Plus |
arm_3R | 1294808..1295261 | 1090..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5208661..5208980 | 1..320 | 100 | -> | Plus |
3R | 5209034..5209460 | 321..747 | 100 | -> | Plus |
3R | 5209520..5209861 | 748..1089 | 100 | -> | Plus |
3R | 5209917..5210370 | 1090..1543 | 100 | Plus |
Translation from 210 to 1442
> GH11824.pep MSLLVQVFKWDQRCPMLHRVDILLRRGVKKQAVYPTKLAEVGRLVDARDD RYETGQLFLHRIFGYRGVILFPWTARVYDRDLHNPGKISATTTTSANPTQ QNRTKEASLRVKANTSASPTAATAQSADAPTSTAFETNAAESTGTTNLGT TSQVDPKEVKGKVQTFYQVLIDTRDCPYIRAQTEAVTFLGNQDSNRSLYA IPGLDYVAHEDIMPYSSSEKSPLQHELFDKFLTHAPDADPPFVGQDTLKA WQEKNHPWLDMSDVHKETTENVRITVIPFYMGCRETPASSVYWWRYCIRL ENLGELSVQLRERHWRIFSLSGTLETVRGRGVVGQEPILSPRLPAFQYSS HVSLQAPSGHMWGTFRLEREDGYSFDCKIPPFSLESKPDDLGTPTPATPS AHDKKRDDSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17253-PA | 409 | GF17253-PA | 1..409 | 1..410 | 1802 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12826-PA | 408 | GG12826-PA | 1..408 | 1..410 | 2041 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18595-PA | 415 | GH18595-PA | 1..406 | 1..397 | 1657 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
POLDIP2-PA | 410 | CG12162-PA | 1..410 | 1..410 | 2180 | 100 | Plus |
POLDIP2-PB | 431 | CG12162-PB | 58..431 | 37..410 | 1987 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23078-PA | 417 | GI23078-PA | 1..415 | 1..403 | 1617 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21664-PA | 423 | GL21664-PA | 1..423 | 1..410 | 1732 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11446-PA | 423 | GA11446-PA | 1..423 | 1..410 | 1733 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10809-PA | 410 | GM10809-PA | 1..410 | 1..410 | 2163 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19787-PA | 410 | GD19787-PA | 1..410 | 1..410 | 2155 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22698-PA | 413 | GJ22698-PA | 1..411 | 1..403 | 1672 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11224-PA | 416 | GK11224-PA | 2..416 | 1..410 | 1719 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25469-PA | 408 | GE25469-PA | 1..408 | 1..410 | 2005 | 93.4 | Plus |
Translation from 210 to 1442
> GH11824.hyp MSLLVQVFKWDQRCPMLHRVDILLRRGVKKQAVYPTKLAEVGRLVDARDD RYETGQLFLHRIFGYRGVILFPWTARVYDRDLHNPGKISATTTTSANPTQ QNRTKEASLRVKANTSASPTAATAQSADAPTSTAFETNAAESTGTTNLGT TSQVDPKEVKGKVQTFYQVLIDTRDCPYIRAQTEAVTFLGNQDSNRSLYA IPGLDYVAHEDIMPYSSSEKSPLQHELFDKFLTHAPDADPPFVGQDTLKA WQEKNHPWLDMSDVHKETTENVRITVIPFYMGCRETPASSVYWWRYCIRL ENLGELSVQLRERHWRIFSLSGTLETVRGRGVVGQEPILSPRLPAFQYSS HVSLQAPSGHMWGTFRLEREDGYSFDCKIPPFSLESKPDDLGTPTPATPS AHDKKRDDSD*