BDGP Sequence Production Resources |
Search the DGRC for GH11850
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 118 |
Well: | 50 |
Vector: | pOT2 |
Associated Gene/Transcript | Mst35Bb-RA |
Protein status: | GH11850.pep: gold |
Preliminary Size: | 671 |
Sequenced Size: | 696 |
Gene | Date | Evidence |
---|---|---|
CG4478 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4478 | 2002-05-18 | Blastp of sequenced clone |
CG4478 | 2003-01-01 | Sim4 clustering to Release 3 |
Mst35Bb | 2008-04-29 | Release 5.5 accounting |
Mst35Bb | 2008-08-15 | Release 5.9 accounting |
Mst35Bb | 2008-12-18 | 5.12 accounting |
696 bp (696 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118776
> GH11850.complete CACAAACAGTTCACAAGCAAAATTTTTCCAAAAATTTATAGTCTTATTTT TATGATCTTCTTAAAAATTAGTTGTGACAAAAATTTGGTTTTTATAAAAA ACTTCATAAGGAGTTTGTAAAAATTTTCTACGATGAGTTCAAATAATGTA AATGAGTGCAAGAGCCTGTGGAATGGCATAATTTCCATTTCTGCAAAAGA TGAAAGTCCTAAAGGTCTCACTGAAATGTGTAATCATCCAAAGAGGAGAG CACCGCCCAAATGTAAGCCAATGAAGTCCTGTGCAAAGCCGCGCCGAAAG GCAGCCTGTGCCAAGGCGACTCGGCCCAAGGTCAAGTGTGCACCGAGTCA GAAGTGCAGCAAGCAGGGACCTGTCACTAACAACGCCTATTTGAATTTCG TGCGTTTCTTCCGAAAGAAGCACTGTGACTTGAAGCCGCAGGAATTAATT GCAGAGGCCGCTAAAGCGTGGGCCGAGCTCCCGGAGCATAGAAAGGATAG ATACCGCCGGATGGCATGCAAGGTCACCACCAGTGAACGCCACAAGCGCC GACGGATTTGCAAGTAATACTGAGATAGGAAAAAGTCTGATGCAGTTAAG TCCAGGCATATATTTTCATTGATTTGATACCATTCGATGAATTTAGAAAT AAAAAAAATTAAAAACCGGGAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 14881049..14881452 | 514..111 | 2020 | 100 | Minus |
chr2L | 23010047 | chr2L | 14877988..14878388 | 514..114 | 1720 | 95.3 | Minus |
chr2L | 23010047 | chr2L | 14880843..14881001 | 670..513 | 745 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 14882345..14882455 | 111..1 | 555 | 100 | Minus |
chr2L | 23010047 | chr2L | 14877842..14877940 | 611..513 | 465 | 98 | Minus |
chr2L | 23010047 | chr2L | 14880273..14880366 | 101..1 | 305 | 89.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 14882306..14882709 | 514..111 | 2020 | 100 | Minus |
2L | 23513712 | 2L | 14879237..14879640 | 514..111 | 1765 | 95.8 | Minus |
2L | 23513712 | 2L | 14882101..14882258 | 670..513 | 790 | 100 | Minus |
2L | 23513712 | 2L | 14883602..14883712 | 111..1 | 555 | 100 | Minus |
2L | 23513712 | 2L | 14879091..14879189 | 611..513 | 465 | 98 | Minus |
2L | 23513712 | 2L | 14881522..14881615 | 101..1 | 305 | 89.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 14882306..14882709 | 514..111 | 2020 | 100 | Minus |
2L | 23513712 | 2L | 14879237..14879640 | 514..111 | 1765 | 95.7 | Minus |
2L | 23513712 | 2L | 14882101..14882258 | 670..513 | 790 | 100 | Minus |
2L | 23513712 | 2L | 14883602..14883712 | 111..1 | 555 | 100 | Minus |
2L | 23513712 | 2L | 14879091..14879189 | 611..513 | 465 | 97.9 | Minus |
2L | 23513712 | 2L | 14881522..14881615 | 101..1 | 315 | 89.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 14880843..14881000 | 514..670 | 99 | <- | Minus |
chr2L | 14881050..14881451 | 112..513 | 100 | <- | Minus |
chr2L | 14882345..14882455 | 1..111 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst35Bb-RA | 1..435 | 133..567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst35Bb-RA | 1..435 | 133..567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst35Bb-RA | 1..435 | 133..567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst35Bb-RA | 1..435 | 133..567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst35Bb-RA | 1..435 | 133..567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst35Bb-RA | 4..673 | 1..670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst35Bb-RA | 4..673 | 1..670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst35Bb-RA | 10..679 | 1..670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst35Bb-RA | 4..673 | 1..670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst35Bb-RA | 10..679 | 1..670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14883602..14883712 | 1..111 | 100 | Minus | |
2L | 14882101..14882257 | 514..670 | 100 | <- | Minus |
2L | 14882307..14882708 | 112..513 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14883602..14883712 | 1..111 | 100 | Minus | |
2L | 14882101..14882257 | 514..670 | 100 | <- | Minus |
2L | 14882307..14882708 | 112..513 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14883602..14883712 | 1..111 | 100 | Minus | |
2L | 14882101..14882257 | 514..670 | 100 | <- | Minus |
2L | 14882307..14882708 | 112..513 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 14882101..14882257 | 514..670 | 100 | <- | Minus |
arm_2L | 14882307..14882708 | 112..513 | 100 | <- | Minus |
arm_2L | 14883602..14883712 | 1..111 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14882307..14882708 | 112..513 | 100 | <- | Minus |
2L | 14883602..14883712 | 1..111 | 100 | Minus | |
2L | 14882101..14882257 | 514..670 | 100 | <- | Minus |
Translation from 132 to 566
> GH11850.pep MSSNNVNECKSLWNGIISISAKDESPKGLTEMCNHPKRRAPPKCKPMKSC AKPRRKAACAKATRPKVKCAPSQKCSKQGPVTNNAYLNFVRFFRKKHCDL KPQELIAEAAKAWAELPEHRKDRYRRMACKVTTSERHKRRRICK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15002-PA | 331 | GF15002-PA | 37..146 | 45..140 | 263 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24235-PA | 202 | GG24235-PA | 69..198 | 15..143 | 466 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH25261-PA | 93 | GH25261-PA | 2..91 | 49..143 | 255 | 55.8 | Plus |
Dgri\GH10828-PA | 277 | GH10828-PA | 37..109 | 49..126 | 188 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ProtB-PA | 144 | CG4478-PA | 1..144 | 1..144 | 786 | 100 | Plus |
ProtA-PB | 146 | CG4479-PB | 1..144 | 1..144 | 720 | 92.4 | Plus |
ProtA-PA | 146 | CG4479-PA | 1..144 | 1..144 | 720 | 92.4 | Plus |
CG46193-PA | 102 | CG46193-PA | 9..70 | 44..116 | 200 | 53.4 | Plus |
CG46191-PA | 102 | CG46191-PA | 7..70 | 48..116 | 176 | 50.7 | Plus |
CG46192-PA | 133 | CG46192-PA | 38..101 | 48..116 | 175 | 50.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17338-PA | 277 | GI17338-PA | 205..274 | 74..143 | 255 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14516-PA | 84 | GL14516-PA | 15..64 | 77..126 | 152 | 52 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18970-PA | 569 | GA18970-PA | 12..64 | 74..126 | 145 | 49.1 | Plus |
Dpse\GA25629-PA | 201 | GA25629-PA | 73..121 | 79..125 | 143 | 55.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14632-PA | 147 | GM14632-PA | 1..145 | 1..143 | 545 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21981-PA | 147 | GD21981-PA | 1..145 | 1..143 | 542 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16066-PA | 212 | GJ16066-PA | 106..210 | 38..143 | 272 | 56 | Plus |
Dvir\GJ18244-PA | 199 | GJ18244-PA | 126..196 | 73..143 | 165 | 46.5 | Plus |
Dvir\GJ16060-PA | 203 | GJ16060-PA | 127..198 | 53..126 | 162 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18077-PA | 235 | GK18077-PA | 135..232 | 36..143 | 292 | 61.1 | Plus |
Dwil\GK14607-PA | 224 | GK14607-PA | 121..221 | 42..144 | 287 | 58.7 | Plus |
Dwil\GK12423-PA | 138 | GK12423-PA | 38..135 | 36..143 | 271 | 57.4 | Plus |
Dwil\GK21287-PA | 153 | GK21287-PA | 68..140 | 36..118 | 184 | 53 | Plus |
Dwil\GK21014-PA | 147 | GK21014-PA | 69..139 | 36..116 | 175 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24787-PA | 217 | GE24787-PA | 69..214 | 15..143 | 454 | 66.7 | Plus |
Translation from 132 to 566
> GH11850.hyp MSSNNVNECKSLWNGIISISAKDESPKGLTEMCNHPKRRAPPKCKPMKSC AKPRRKAACAKATRPKVKCAPSQKCSKQGPVTNNAYLNFVRFFRKKHCDL KPQELIAEAAKAWAELPEHRKDRYRRMACKVTTSERHKRRRICK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mst35Bb-PA | 144 | CG4478-PA | 1..144 | 1..144 | 786 | 100 | Plus |
Mst35Ba-PB | 146 | CG4479-PB | 1..144 | 1..144 | 720 | 92.4 | Plus |
Mst35Ba-PA | 146 | CG4479-PA | 1..144 | 1..144 | 720 | 92.4 | Plus |