BDGP Sequence Production Resources |
Search the DGRC for GH11935
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 119 |
Well: | 35 |
Vector: | pOT2 |
Associated Gene/Transcript | Ostgamma-RA |
Protein status: | GH11935.pep: gold |
Preliminary Size: | 1226 |
Sequenced Size: | 1244 |
Gene | Date | Evidence |
---|---|---|
CG7830 | 2001-01-01 | Release 2 assignment |
CG7830 | 2002-01-03 | Blastp of sequenced clone |
CG7830 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7830 | 2008-04-29 | Release 5.5 accounting |
CG7830 | 2008-08-15 | Release 5.9 accounting |
CG7830 | 2008-12-18 | 5.12 accounting |
1244 bp (1244 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075331
> GH11935.complete CCATTCACAATCAGCTGCATGCGCCGGAAAAAATATTTTTGATTAAACGT TTTTTCTGTGATTTTGCGTTAAAGTAGTGAGATTGTTAATTAAATCGCCT GCAGAATGAGACTGCTGCACAAGACGCTGCTCAGCGGTCTGCTGGTAGTG GCGTTATTCGCTATTTACGCAGCCGCGCAATCAAAATCGAAGACGGGACT CTCGCTGTCGGAAAAAGTACAAAACCTGGTGGACATGAACGCCAAAAAGC CGCTGCTCCGCTTCAATGGACCCAAGTTTCGGGAGTATGTGAAGAGTGCA CCACGGAATTACTCGATGATCGTAATGCTCACCGCATTGGCTCCATCGAG ACAATGCCAGATCTGTAGGCACGCCCACGACGAGTTCGCCATCGTGGCCA ACTCCTACCGCTTCTCCTCGACTTACTCCAACAAACTCTTCTTTGCTATG GTGGATTTCGATGACGGCTCCGAGGTTTTCCAACTTCTGCGCCTGAACAC CGCCCCGGTGTTCATGCATTTCCCGGCCAAGGGCAAGCCAAAGGGAGCTG ACACCATGGATATCCATCGCGTCGGCTTCGCCGCCGATTCTATTGCGAAA TTCGTTGCCGAGCGAACGGACATCACCATTCGCATTTTCCGTCCACCAAA CTATTCTGGCACCGTGGCCATGATCACATTGGTGGCCCTGGTGGGAAGTT TTCTTTACATTCGGCGAAATAACTTGGAGTTCTTGTACAACAAGAATCTG TGGGGTGCCATCGCAGTATTCTTCTGCTTCGCCATGATCTCGGGTCAAAT GTGGAATCATATCCGTGGACCACCGCTGGTCCACAAGTCGCAAAATGGTG GCGTGGCCTACATCCATGGCTCCTCGCAGGGCCAGCTGGTGGTGGAGACC TATATCGTCATGTTCCTGAATGCCATGATTGTGCTGGGCATGATTCTGCT GATTGAATCGGGAACACCAAAGGCTCACAACAAGAACAGGATAATGGCGA TGACTGGTTTGGTGCTCCTCACCGTGTTCTTCTCCTTCCTGTTGTCCGTT TTTCGTTCGAAGGCGCAGGGTTATCCCTATAGTTTCTTGTTCAAATAGAA TCGACTGCAGTCCTGTTCCAGTTCAAGTTCACCCTATATCGTTTTTGTAG TTAAAATCACCAGCGAGCACACATTTTTCGTGCGTGTAAAACGACTTTAA TAAATTCCACTACTAAATTATTTGTACAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8306075..8306803 | 919..191 | 3495 | 98.6 | Minus |
chr2L | 23010047 | chr2L | 8306911..8307102 | 192..1 | 945 | 99.5 | Minus |
chr2L | 23010047 | chr2L | 8305834..8305996 | 1082..920 | 800 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 8305624..8305777 | 1227..1074 | 740 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8307147..8307875 | 919..191 | 3645 | 100 | Minus |
2L | 23513712 | 2L | 8307983..8308174 | 192..1 | 960 | 100 | Minus |
2L | 23513712 | 2L | 8306906..8307068 | 1082..920 | 815 | 100 | Minus |
2L | 23513712 | 2L | 8306691..8306849 | 1232..1074 | 765 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8307147..8307875 | 919..191 | 3645 | 100 | Minus |
2L | 23513712 | 2L | 8307983..8308174 | 192..1 | 960 | 100 | Minus |
2L | 23513712 | 2L | 8306906..8307068 | 1082..920 | 815 | 100 | Minus |
2L | 23513712 | 2L | 8306691..8306849 | 1232..1074 | 765 | 98.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8305624..8305768 | 1083..1227 | 100 | <- | Minus |
chr2L | 8305834..8305996 | 920..1082 | 99 | <- | Minus |
chr2L | 8306075..8306801 | 193..919 | 98 | <- | Minus |
chr2L | 8306911..8307102 | 1..192 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7830-RA | 1..993 | 106..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ostgamma-RA | 1..993 | 106..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7830-RA | 1..993 | 106..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ostgamma-RA | 1..993 | 106..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7830-RA | 15..1241 | 1..1227 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7830-RA | 15..1241 | 1..1227 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ostgamma-RA | 19..1245 | 1..1227 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7830-RA | 15..1241 | 1..1227 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ostgamma-RA | 19..1245 | 1..1227 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8306696..8306840 | 1083..1227 | 100 | <- | Minus |
2L | 8306906..8307068 | 920..1082 | 100 | <- | Minus |
2L | 8307147..8307873 | 193..919 | 100 | <- | Minus |
2L | 8307983..8308174 | 1..192 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8306696..8306840 | 1083..1227 | 100 | <- | Minus |
2L | 8306906..8307068 | 920..1082 | 100 | <- | Minus |
2L | 8307147..8307873 | 193..919 | 100 | <- | Minus |
2L | 8307983..8308174 | 1..192 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8306696..8306840 | 1083..1227 | 100 | <- | Minus |
2L | 8306906..8307068 | 920..1082 | 100 | <- | Minus |
2L | 8307147..8307873 | 193..919 | 100 | <- | Minus |
2L | 8307983..8308174 | 1..192 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8306696..8306840 | 1083..1227 | 100 | <- | Minus |
arm_2L | 8306906..8307068 | 920..1082 | 100 | <- | Minus |
arm_2L | 8307147..8307873 | 193..919 | 100 | <- | Minus |
arm_2L | 8307983..8308174 | 1..192 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8307147..8307873 | 193..919 | 100 | <- | Minus |
2L | 8307983..8308174 | 1..192 | 100 | Minus | |
2L | 8306696..8306840 | 1083..1227 | 100 | <- | Minus |
2L | 8306906..8307068 | 920..1082 | 100 | <- | Minus |
Translation from 105 to 1097
> GH11935.pep MRLLHKTLLSGLLVVALFAIYAAAQSKSKTGLSLSEKVQNLVDMNAKKPL LRFNGPKFREYVKSAPRNYSMIVMLTALAPSRQCQICRHAHDEFAIVANS YRFSSTYSNKLFFAMVDFDDGSEVFQLLRLNTAPVFMHFPAKGKPKGADT MDIHRVGFAADSIAKFVAERTDITIRIFRPPNYSGTVAMITLVALVGSFL YIRRNNLEFLYNKNLWGAIAVFFCFAMISGQMWNHIRGPPLVHKSQNGGV AYIHGSSQGQLVVETYIVMFLNAMIVLGMILLIESGTPKAHNKNRIMAMT GLVLLTVFFSFLLSVFRSKAQGYPYSFLFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15266-PA | 330 | GF15266-PA | 1..330 | 1..330 | 1691 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23457-PA | 330 | GG23457-PA | 1..330 | 1..330 | 1750 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10178-PA | 330 | GH10178-PA | 1..330 | 1..330 | 1543 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ostgamma-PA | 330 | CG7830-PA | 1..330 | 1..330 | 1687 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14239-PA | 331 | GI14239-PA | 1..331 | 1..330 | 1617 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19384-PA | 330 | GL19384-PA | 1..330 | 1..330 | 1651 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20614-PA | 330 | GA20614-PA | 1..330 | 1..330 | 1651 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13078-PA | 330 | GM13078-PA | 1..330 | 1..330 | 1752 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22422-PA | 330 | GD22422-PA | 1..330 | 1..330 | 1755 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20558-PA | 330 | GJ20558-PA | 1..330 | 1..330 | 1630 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23820-PA | 329 | GK23820-PA | 1..329 | 1..330 | 1589 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11063-PA | 330 | GE11063-PA | 1..330 | 1..330 | 1731 | 97.6 | Plus |
Translation from 105 to 1097
> GH11935.hyp MRLLHKTLLSGLLVVALFAIYAAAQSKSKTGLSLSEKVQNLVDMNAKKPL LRFNGPKFREYVKSAPRNYSMIVMLTALAPSRQCQICRHAHDEFAIVANS YRFSSTYSNKLFFAMVDFDDGSEVFQLLRLNTAPVFMHFPAKGKPKGADT MDIHRVGFAADSIAKFVAERTDITIRIFRPPNYSGTVAMITLVALVGSFL YIRRNNLEFLYNKNLWGAIAVFFCFAMISGQMWNHIRGPPLVHKSQNGGV AYIHGSSQGQLVVETYIVMFLNAMIVLGMILLIESGTPKAHNKNRIMAMT GLVLLTVFFSFLLSVFRSKAQGYPYSFLFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ostgamma-PA | 330 | CG7830-PA | 1..330 | 1..330 | 1687 | 100 | Plus |