BDGP Sequence Production Resources |
Search the DGRC for GH11963
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 119 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | FucT6-RA |
Protein status: | GH11963.pep: gold |
Preliminary Size: | 2771 |
Sequenced Size: | 2764 |
Gene | Date | Evidence |
---|---|---|
CG2448 | 2001-01-01 | Release 2 assignment |
CG2448 | 2001-07-04 | Blastp of sequenced clone |
CG2448 | 2003-01-01 | Sim4 clustering to Release 3 |
FucT6 | 2008-04-29 | Release 5.5 accounting |
FucT6 | 2008-08-15 | Release 5.9 accounting |
FucT6 | 2008-12-18 | 5.12 accounting |
2764 bp (2764 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051451
> GH11963.complete AAAACACAGAACAGGACGGAAATATATAGAATACTTTTGCACTTAATTTG ACTTGCCACGACTACCTGGCCAACTCGATCGGCGATATAGACCACCGGCC CATCAGTCAATTTCATTCTGGCATTGATCGAGCTCCGTGAAACTTGCATT CCAGCTGGCCACCATCCCATACGTCCATATATCCTTTATAAAATATCTAT AAATCGAAGAGGAATCCTAGCCCCGCCGACCATGTCATTGGATCGCCTTG GTTGCTGGCCGGATCGGAGTTAATTGAGACTATGCACCGGAATCGAAACA GCTCCGCATTGAAGTACACGTAGAGAGCATTTCCGAGTCCGCCCCCGTTC GGAGCCCCGTTCCTTGATCCCCTGGAAGATCGATTGTGGTCCCGGCGAGC GGAGGGCAGAATCCAGAGGAGGAGGAGGAGCAGGAGCAGCAGTGGAAACG CCGGCATGCTGCTGGTGCGTCAGCTATTCGGGGCTTCGGCCAACTCCTGG GCACGCGCCCTCATCATATTCGTACTGGCCTGGATCGGGTTGGTCTACGT GTTCGTGGTCAAGCTGACCAATACTCAGGGCCAGCAGGCGGCCGGGGAGA GTGAGCTGAACGCCCGTCGCATATCACAGGCGCTCCAGATGCTGGAGCAC ACGAGACAGCGCAATGAGGAGCTTAAACAGCTCATCGACGAGTTGATGAG TGACCAACTGGACAAGCAGAGCGCAATGAAACTGGTGCAAAGGCTGGAGA ACGATGCGCTAAATCCAAAGCTGGCGCCCGAGGTCGCCGGCCCGGAACCA GAATCCATGTTCGAGTCCGCCCCCGCTGATCTGCGCGGTTGGAATAATGT GGCCGAGGGAGCGCCCAATGATCTGGAGGCCGGTGTTCCGGATCATGGCG AATTCGAGCCCAGCCTAGAGTACGAGTTCACGCGCAGACGCATCCAGACG AACATCGGTGAGATCTGGAATTTCTTCAGCAGTGAACTGGGCAAAGTGCG TAAGGCAGTGGCCGCCGGCCATGCGAGTGCCGATTTGGAGGAGTCCATTA ACCAGGTGCTGCTCCAAGGCGCCGAGCACAAGCGCTCCCTGCTGAGCGAT ATGGAGCGGATGCGTCAGTCCGATGGCTACGAGGCCTGGCGACACAAGGA GGCACGGGATTTGAGCGATTTGGTACAGCGGCGCCTGCACCATCTACAGA ATCCCAGTGATTGCCAGAATGCTCGCAAGCTGGTCTGTAAGCTCAACAAG GGCTGTGGCTACGGCTGCCAACTGCACCATGTGGTGTATTGCTTTATAGT GGCCTACGCCACCGAGCGGACGCTCATCTTAAAATCCCGCGGATGGCGGT ATCACAAGGGCGGCTGGGAGGAGGTGTTCCAACCGGTGTCCAACAGCTGC CATGATGCGGGCACCGCCAACACATACAATTGGCCGGGCAAGCCGAACAC CCAGGTGCTGGTGTTGCCCATCATTGACTCGCTGATGCCGAGACCGCCGT ACCTGCCGCTCGCCGTTCCCGAGGATCTGGCGCCGAGACTTAAGCGTCTG CATGGAGACCCCATCGTTTGGTGGGTGGGTCAGTTCCTTAAGTATTTGCT CCGACCGCAACCAACGACGCGGGATTTTCTTACCTCTGGCATGCGCAATT TGGGTTGGGAGCGTCCCATTGTTGGCGTTCATGTCCGTCGCACGGACAAA GTGGGCACAGAAGCGGCCTGCCACAGTGTGGAGGAGTATATGACCTATGT CGAGGACTACTACCGCACGCTGGAGGTAAACGGCAGCACTGTGGCTCGCC GGATTTTCCTCGCATCGGATGATGCCCAGGTTATTGAGGAGGCGCGCCGA AAGTACCCGCAGTACCAGATCATTGGTGATCCGGAGGTGGCGCGCATGGC GTCCGTATCCACACGATACACGGACACCGCCCTGAACGGGATCATTCTGG ATATCCACCTGCTTTCCATGTCCGATCATCTGGTGTGCACCTTCTCGTCG CAGGTGTGTCGCGTGGCCTACGAGATAATGCAGACGATGTATCCGGATGC AGCGCATCGGTTCAAGTCGCTGGACGACATATACTACTACGGTGGCCAGA ATGCGCACAATCGCCGCGTCGTTATCGCCCACAAGCCGCGCACGCACGAG GATCTACAGCTGCGTGTTGGTGACCTCGTCTCGGTGGCTGGTAACCATTG GGATGGCAATTCCAAGGGCAAGAATACCCGCACCAACCAGGGCGGCCTAT TCCCCTCGTTCAAGGTGGAGGAGAAGGTGGACACCGCCAAGCTGCCTCTC TATGCGGGCATTTAGTTAGTTGCTCACATCACTACATTCTCGGCCATGTT GTTGATCGATCTGTAAATCCTATCTGCCGCATTCCACCTGGAATTTCCAT GGTGCATATCGATTCGGCTCGGATCAGCATCACCAGAATCTATCGAATGT CCAGAATCTCAAATGAAATCTCGCTCTTTCTGTACTTGTCCATCAATATG TGACTATTTCTTCATGTTCTCGTCTGCGCACTTTTACGCTCTGATTTCGA TTCCGAATCTTATTCTTATTCTTATTCTGCATTTGTACAAGTCTTTTAAT AAGATGTAAGTCGAAAGCCGAAGAAATTATGTTGACAAGAATATACATAA AGATATTTATATATATAAATAAATTATATATAGAAGTGCATGTAGTTTCA CTAAGCGCAATATAGTCTATCACCTGTAAAATAGTTGAAAGAAAACAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
FucT6-RA | 2927 | FucT6-RA | 96..2859 | 1..2764 | 13775 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11597784..11598855 | 2746..1675 | 5315 | 99.7 | Minus |
chrX | 22417052 | chrX | 11600412..11601117 | 700..1 | 3270 | 97.9 | Minus |
chrX | 22417052 | chrX | 11599453..11600005 | 1251..699 | 2765 | 100 | Minus |
chrX | 22417052 | chrX | 11598920..11599346 | 1675..1249 | 2135 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 11706557..11707646 | 2764..1675 | 5405 | 99.7 | Minus |
X | 23542271 | X | 11709203..11709902 | 700..1 | 3500 | 100 | Minus |
X | 23542271 | X | 11708244..11708796 | 1251..699 | 2765 | 100 | Minus |
X | 23542271 | X | 11707711..11708137 | 1675..1249 | 2135 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 11714655..11715744 | 2764..1675 | 5405 | 99.7 | Minus |
X | 23527363 | X | 11717301..11718000 | 700..1 | 3500 | 100 | Minus |
X | 23527363 | X | 11716342..11716894 | 1251..699 | 2765 | 100 | Minus |
X | 23527363 | X | 11715809..11716235 | 1675..1249 | 2135 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11597789..11598854 | 1676..2741 | 95 | <- | Minus |
chrX | 11598920..11599344 | 1251..1675 | 100 | <- | Minus |
chrX | 11599454..11600003 | 701..1250 | 100 | <- | Minus |
chrX | 11600412..11601117 | 1..700 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FucT6-RA | 1..1860 | 456..2315 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FucT6-RA | 1..1860 | 456..2315 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FucT6-RA | 1..1860 | 456..2315 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FucT6-RA | 1..1860 | 456..2315 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FucT6-RA | 1..1860 | 456..2315 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FucT6-RA | 49..2794 | 1..2746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FucT6-RA | 49..2794 | 1..2746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FucT6-RA | 50..2795 | 1..2746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FucT6-RA | 49..2794 | 1..2746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
FucT6-RA | 50..2795 | 1..2746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11706575..11707645 | 1676..2746 | 100 | <- | Minus |
X | 11707711..11708135 | 1251..1675 | 100 | <- | Minus |
X | 11708245..11708794 | 701..1250 | 100 | <- | Minus |
X | 11709203..11709902 | 1..700 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11706575..11707645 | 1676..2746 | 100 | <- | Minus |
X | 11707711..11708135 | 1251..1675 | 100 | <- | Minus |
X | 11708245..11708794 | 701..1250 | 100 | <- | Minus |
X | 11709203..11709902 | 1..700 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11706575..11707645 | 1676..2746 | 100 | <- | Minus |
X | 11707711..11708135 | 1251..1675 | 100 | <- | Minus |
X | 11708245..11708794 | 701..1250 | 100 | <- | Minus |
X | 11709203..11709902 | 1..700 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11600608..11601678 | 1676..2746 | 100 | <- | Minus |
arm_X | 11601744..11602168 | 1251..1675 | 100 | <- | Minus |
arm_X | 11602278..11602827 | 701..1250 | 100 | <- | Minus |
arm_X | 11603236..11603935 | 1..700 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11714673..11715743 | 1676..2746 | 100 | <- | Minus |
X | 11715809..11716233 | 1251..1675 | 100 | <- | Minus |
X | 11716343..11716892 | 701..1250 | 100 | <- | Minus |
X | 11717301..11718000 | 1..700 | 100 | Minus |
Translation from 455 to 2314
> GH11963.pep MLLVRQLFGASANSWARALIIFVLAWIGLVYVFVVKLTNTQGQQAAGESE LNARRISQALQMLEHTRQRNEELKQLIDELMSDQLDKQSAMKLVQRLEND ALNPKLAPEVAGPEPESMFESAPADLRGWNNVAEGAPNDLEAGVPDHGEF EPSLEYEFTRRRIQTNIGEIWNFFSSELGKVRKAVAAGHASADLEESINQ VLLQGAEHKRSLLSDMERMRQSDGYEAWRHKEARDLSDLVQRRLHHLQNP SDCQNARKLVCKLNKGCGYGCQLHHVVYCFIVAYATERTLILKSRGWRYH KGGWEEVFQPVSNSCHDAGTANTYNWPGKPNTQVLVLPIIDSLMPRPPYL PLAVPEDLAPRLKRLHGDPIVWWVGQFLKYLLRPQPTTRDFLTSGMRNLG WERPIVGVHVRRTDKVGTEAACHSVEEYMTYVEDYYRTLEVNGSTVARRI FLASDDAQVIEEARRKYPQYQIIGDPEVARMASVSTRYTDTALNGIILDI HLLSMSDHLVCTFSSQVCRVAYEIMQTMYPDAAHRFKSLDDIYYYGGQNA HNRRVVIAHKPRTHEDLQLRVGDLVSVAGNHWDGNSKGKNTRTNQGGLFP SFKVEEKVDTAKLPLYAGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21438-PA | 618 | GF21438-PA | 1..618 | 1..619 | 3125 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18841-PA | 619 | GG18841-PA | 1..619 | 1..619 | 3321 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24560-PA | 628 | GH24560-PA | 1..628 | 1..619 | 2630 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
FucT6-PA | 619 | CG2448-PA | 1..619 | 1..619 | 3267 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16320-PA | 627 | GI16320-PA | 1..627 | 1..619 | 2679 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15236-PA | 330 | GL15236-PA | 1..330 | 290..619 | 1682 | 91.8 | Plus |
Dper\GL15235-PA | 263 | GL15235-PA | 1..222 | 1..216 | 842 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\FucT6-PA | 625 | GA15369-PA | 1..625 | 1..619 | 2920 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13053-PA | 619 | GM13053-PA | 1..619 | 1..619 | 3345 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15979-PA | 251 | GD15979-PA | 29..251 | 397..619 | 1206 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15660-PA | 625 | GJ15660-PA | 1..625 | 1..619 | 2628 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19791-PA | 644 | GK19791-PA | 1..644 | 1..619 | 2774 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\FucT6-PA | 619 | GE17606-PA | 1..619 | 1..619 | 3315 | 98.9 | Plus |
Translation from 455 to 2314
> GH11963.hyp MLLVRQLFGASANSWARALIIFVLAWIGLVYVFVVKLTNTQGQQAAGESE LNARRISQALQMLEHTRQRNEELKQLIDELMSDQLDKQSAMKLVQRLEND ALNPKLAPEVAGPEPESMFESAPADLRGWNNVAEGAPNDLEAGVPDHGEF EPSLEYEFTRRRIQTNIGEIWNFFSSELGKVRKAVAAGHASADLEESINQ VLLQGAEHKRSLLSDMERMRQSDGYEAWRHKEARDLSDLVQRRLHHLQNP SDCQNARKLVCKLNKGCGYGCQLHHVVYCFIVAYATERTLILKSRGWRYH KGGWEEVFQPVSNSCHDAGTANTYNWPGKPNTQVLVLPIIDSLMPRPPYL PLAVPEDLAPRLKRLHGDPIVWWVGQFLKYLLRPQPTTRDFLTSGMRNLG WERPIVGVHVRRTDKVGTEAACHSVEEYMTYVEDYYRTLEVNGSTVARRI FLASDDAQVIEEARRKYPQYQIIGDPEVARMASVSTRYTDTALNGIILDI HLLSMSDHLVCTFSSQVCRVAYEIMQTMYPDAAHRFKSLDDIYYYGGQNA HNRRVVIAHKPRTHEDLQLRVGDLVSVAGNHWDGNSKGKNTRTNQGGLFP SFKVEEKVDTAKLPLYAGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
FucT6-PA | 619 | CG2448-PA | 1..619 | 1..619 | 3267 | 100 | Plus |