BDGP Sequence Production Resources |
Search the DGRC for GH12014
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 120 |
Well: | 14 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4198-RA |
Protein status: | GH12014.pep: gold |
Preliminary Size: | 1880 |
Sequenced Size: | 1906 |
Gene | Date | Evidence |
---|---|---|
CG4198 | 2001-01-01 | Release 2 assignment |
CG4198 | 2001-09-19 | Blastp of sequenced clone |
CG4198 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4198 | 2008-04-29 | Release 5.5 accounting |
CG4198 | 2008-08-15 | Release 5.9 accounting |
CG4198 | 2008-12-18 | 5.12 accounting |
1906 bp (1906 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058344
> GH12014.complete CACACACGAAAAACAAAAAATCCCAAACATTCCGCAGCACAAATTCAATC AAATCCAAAACGCACATTTCGGTCGCATCCAAATTGTACGGATTTCGTTA GTAAATAAAAATCAAATTTCGTGTAAATCCAATCCATAATCCGTGGTAGA GTAGAAACCACACCATCATGTCGTATCAGATCAAATCGACGCCCTACTTT CGTCGCATGTTCAACGAGAGCAAGAAGAATGGCCAACTGCAGCGTCTGCG TGATGAGTACGAGCGCATCCAGGAGTTCAACGATCGCACCATCGAAATGA AGATGCGACAGGTGCGATTAAAGCGGCTATTTCGCGAGATCGAGGTAATT AAGGTGGCTGGCGGGGCGGCCGGTGGCGCCAGCGGTGGCGGCACATCGAC GGCATCATCGCCATCGAATGTTGACCAATCGTTTGGTTTAGCCGGCGGAC GCGTTACCCGCCGGAGACGGCAACAGGCACACGGTGCTATCACGCTGGCT AGCAGCACGCCCCAGCAGCGGATGCACAAACAGCGCATAGAGACGCTGGC ACGCGCACGCCAACTGGGCCAGGAGATCTCGCGTCGGAATGGCCTAATGG CCGAGGCCGGCACCGGCGGTTTCCTGCGCAGCGAACTCCGGATGACGGCC AAGCTGCAGGCGGCGAACGATGCACGCCGGGCGGCCGTGGAGCGTCGCGA CTTGGCCGCCAAGCGCATCTCCTATGGCAACGATCAGTCGCGACAGAATA TCCAACGCATGCTCATCCAACGCCAGCGCAGACATGAACAGCAGCAAGCG TTGGCGGCGACAGTAGCATCACCGGCGGCACCGTCATCCAATTCCTACCA GGTGTCCATAGCGCAGCAGCCGGTCACAAGCAGGCCCAGGCATGAATACA CGGACAATTGCCAACAACAGCAGGAACTGCTGGCGGTGACCAGTGAGCGA TCGACGGAGCAGGGCGATCATTTGCAGATGGAATGCGAGGGGCAGTCGTA CTCGGAGCAAAGCTTCCATTCGAACGACTGTCTGGCGCAATCGATGGACG AGGATCTGGATGGTGAGGAGGAGCTGGAATACACACGCCATCGGCGTGAT GGCGACGCGGATGAGGAGCCGGAGCGGCAGTCCTGCCTGGTGACGCTGAA CAAGGAAAGATCCACATTGGCAGCCACATCACCGCTGGATATGCGTCGAG TCAAAAGCTCCATTGATTCGTATCGAAAGACGCACCTATCTCCGCTGGCC AGCGGCAGCAATTGGGTTCGGGTTGTTGGTGGCGCCCAATCGTCCACCAT TGGATCGCATCAGCCAAGTGGAACGGTGCCGCCGCCGCTAAACGATGAAC TGCAGCTGGATTCGCAGTCCAATTCGAGTAGGTGGCATGAGGTCTCAATG ATGCTGTCGTGGTTCGGCGCCGCTTCCGACATCCCAACCGACTATGCCGA TGCTCCGCCACCCGAGGTGCCCAGTCACTACGATTGCGATTCCATTAGCA ATGCGGACGATATGCCAACGCCAACTGTGTGCCGTCGACAGCGCATGTTC GCCGAGCAGCCGAGTGATGCTGCCACACAGGCGCAGGAGGAGCCCTTCTA GCCAGCCGACGAGCGGCAGACGCACTGCAGCACACATCTATTTTTTTTAC TGCAATTCGGTATGGAAATCCAAACCATCCAACCAACCAACCAGGCAAGT CTGCAGCGCCTGCAAAGTTCACTTATTTGGCATGCTACGCTAGTTTTGGC TTAGAATTCCCGGCCCATCCTGTCCAGAAGTTGTGCACGTGCACTTGGCT GGCAACCTTTTCGCATCTTTATTTGGTAATAAAATTATGGGTATGGTATT ACATTTCACAAATAATAATAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAA AAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5205812..5206691 | 1..880 | 100 | -> | Plus |
chrX | 5206758..5207740 | 881..1863 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4198-RA | 1..1434 | 168..1601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4198-RA | 1..1434 | 168..1601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4198-RA | 1..1434 | 168..1601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4198-RA | 1..1434 | 168..1601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4198-RA | 1..1434 | 168..1601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4198-RA | 1..1863 | 1..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4198-RA | 1..1863 | 1..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4198-RA | 9..1867 | 1..1859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4198-RA | 1..1863 | 1..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4198-RA | 9..1867 | 1..1859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5313266..5314145 | 1..880 | 100 | -> | Plus |
X | 5314212..5315194 | 881..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5313266..5314145 | 1..880 | 100 | -> | Plus |
X | 5314212..5315194 | 881..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5313266..5314145 | 1..880 | 100 | -> | Plus |
X | 5314212..5315194 | 881..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5207299..5208178 | 1..880 | 100 | -> | Plus |
arm_X | 5208245..5209227 | 881..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5321364..5322243 | 1..880 | 100 | -> | Plus |
X | 5322310..5323292 | 881..1863 | 100 | Plus |
Translation from 167 to 1600
> GH12014.pep MSYQIKSTPYFRRMFNESKKNGQLQRLRDEYERIQEFNDRTIEMKMRQVR LKRLFREIEVIKVAGGAAGGASGGGTSTASSPSNVDQSFGLAGGRVTRRR RQQAHGAITLASSTPQQRMHKQRIETLARARQLGQEISRRNGLMAEAGTG GFLRSELRMTAKLQAANDARRAAVERRDLAAKRISYGNDQSRQNIQRMLI QRQRRHEQQQALAATVASPAAPSSNSYQVSIAQQPVTSRPRHEYTDNCQQ QQELLAVTSERSTEQGDHLQMECEGQSYSEQSFHSNDCLAQSMDEDLDGE EELEYTRHRRDGDADEEPERQSCLVTLNKERSTLAATSPLDMRRVKSSID SYRKTHLSPLASGSNWVRVVGGAQSSTIGSHQPSGTVPPPLNDELQLDSQ SNSSRWHEVSMMLSWFGAASDIPTDYADAPPPEVPSHYDCDSISNADDMP TPTVCRRQRMFAEQPSDAATQAQEEPF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21335-PA | 691 | GF21335-PA | 1..221 | 1..205 | 554 | 61.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18751-PA | 547 | GG18751-PA | 3..527 | 2..477 | 980 | 49.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24610-PA | 431 | GH24610-PA | 3..180 | 2..196 | 496 | 56.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4198-PA | 477 | CG4198-PA | 1..477 | 1..477 | 2447 | 100 | Plus |
CG4198-PB | 476 | CG4198-PB | 1..476 | 1..477 | 2431 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11072-PA | 611 | GI11072-PA | 1..176 | 1..205 | 515 | 56.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14289-PA | 502 | GL14289-PA | 1..208 | 1..205 | 507 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18022-PA | 502 | GA18022-PA | 1..208 | 1..205 | 509 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12399-PA | 484 | GM12399-PA | 1..484 | 1..477 | 1575 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16852-PA | 514 | GJ16852-PA | 1..175 | 1..205 | 487 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18541-PA | 516 | GK18541-PA | 1..191 | 1..195 | 510 | 62.1 | Plus |
Translation from 167 to 1600
> GH12014.hyp MSYQIKSTPYFRRMFNESKKNGQLQRLRDEYERIQEFNDRTIEMKMRQVR LKRLFREIEVIKVAGGAAGGASGGGTSTASSPSNVDQSFGLAGGRVTRRR RQQAHGAITLASSTPQQRMHKQRIETLARARQLGQEISRRNGLMAEAGTG GFLRSELRMTAKLQAANDARRAAVERRDLAAKRISYGNDQSRQNIQRMLI QRQRRHEQQQALAATVASPAAPSSNSYQVSIAQQPVTSRPRHEYTDNCQQ QQELLAVTSERSTEQGDHLQMECEGQSYSEQSFHSNDCLAQSMDEDLDGE EELEYTRHRRDGDADEEPERQSCLVTLNKERSTLAATSPLDMRRVKSSID SYRKTHLSPLASGSNWVRVVGGAQSSTIGSHQPSGTVPPPLNDELQLDSQ SNSSRWHEVSMMLSWFGAASDIPTDYADAPPPEVPSHYDCDSISNADDMP TPTVCRRQRMFAEQPSDAATQAQEEPF*