BDGP Sequence Production Resources |
Search the DGRC for GH12207
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 122 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | Fmo-2-RA |
Protein status: | GH12207.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1663 |
Gene | Date | Evidence |
---|---|---|
CG3174 | 2001-01-01 | Release 2 assignment |
CG3174 | 2001-09-19 | Blastp of sequenced clone |
CG3174 | 2003-01-01 | Sim4 clustering to Release 3 |
Fmo-2 | 2008-04-29 | Release 5.5 accounting |
Fmo-2 | 2008-08-15 | Release 5.9 accounting |
Fmo-2 | 2008-12-18 | 5.12 accounting |
1663 bp (1663 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058349
> GH12207.complete AGGCGAGGAGTTAGACGTGTTAGAGGAAAAAGAAACTTTTAAAATTTGCT ACCAATTGGGAATCCCAAAATGATCAAAACTTCAGTGGACAAGCGTCGTG TTTGCGTAATAGGAGCTGGAACAGCGGGGTTGTGCGCGCTGAAGAACTCC CTGGAAGCGGGTCTGGATGCGGTGGCCTACGAACGAGGCACCGAAATCGG AGGAACATGGATTTTCTCCGAGGAAATGCCCAAGGACGAGTACGACGAGG TGCACAGCAGCATGTACGAAGGCCTGCGCACCAATCTTCCAAAGGAGGTC ATGGGCTATCCGGACTACTCGTACCCCGACGATATCACCGAGTCTTTCAT CACCTCCAACCAGGTGCTAGAATTTCTGCGCTCCTACGCGGAACACTTCA AGCTAAAGGCCCACATCAAGCTCCAGCACGAGGTGATAAGAGTGCGTCCT CGCTTGGACGACTGGGAGGTCTACGTATGGGACCACAGCACGGATACCTG TGACCCAGTCTACTACGACTTCGTTTATGTCTGCAACGGGCACTACACGG AACCGGACCTCCCGGAAGTCGAGGGATTAGATCTGTTCGAGGGCAACAAG ATGCACAGCCACCTCTACCGCAAGGCAGATAAGTTTAAAGACGCGCGTGT GCTGATCATTGGCGCCGGCCCCAGTGGCATGGACATCACCAACCATGTTC GCTTGGCTGCCAAGCAGGTCTTCCTAAGCCACCACCTTTCCACGACCCCT AACACAGCATTCATGGGCAACGTAACGCAGAAGCCGGATGTGAAACGCTT CACAAAGGATGGAGCCGTCTTCACGGACGGCAGCACGGAGAGCTTTGACC ACGTGATGTTCTGCACCGGCTACAAGTACACATTCCCCTGCCTCAGCACC GATGTGGGTGTCCAGGTGATAGACAACTTCGTGCAGCCACTGTGGAAGCA CTGCATCAACATCAACCACCCGACCATGGCCTTTGTGGGCCTGCCCTTCA ACGTGATTCCCACCCACATCTTCGACATGCAGGTGCGCTTCACGCTGAAG TTCTTCACAGGTCAGCGGAAGTTTCCCTCCCGGGAGCAGATGATTGCCGA TCTGGAGCAGGAGATCGGAGAGCGGTGGGGCTGCGGCGTGCGCAACCAGA AGAAAGCACATCAGATGGGCGAGCGACAGTTTGTCTACTACAATGAACTG GCCAGTATCGCGGGCATCGAGAACATCAAGCCAGTTATCCACAAGCTAAT GAAGGACTGCGGCAAGAAGTACATTTTTGAATTGGACACGTACAGGAGCA ACAAGTATACGATTTTGGACGATGAAAACTTTTTGAAGAACGGAGAAGCT ATTGTATGATGAACCTGATTTCATCCCATTCTAATATCTTACGTTAGGCG ATAAAAAGTGTTTCACTGTAGTACACGAAGATTTAGCGGACTCTTCGGTT CGGATTCTTTTAACGGATTATAACTCAGATGTGTTAATTAATATTTTATA AGAACAATGTAAATCAAAGTATGTTTTGAACGATTAATTCAAAACGTTTA TTTGCTAACCAGGAGTATATCTGATAATGTCCACCATAGCTCTTTAATTC TAAGCCTCGTAGAATTGTAGAAGTCAAATTAAAATCTTACTCCCGAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 2530202..2530746 | 1179..635 | 2710 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 2529617..2530085 | 1645..1177 | 2345 | 100 | Minus |
chr2R | 21145070 | chr2R | 2531691..2531883 | 470..278 | 965 | 100 | Minus |
chr2R | 21145070 | chr2R | 2531411..2531584 | 640..467 | 870 | 100 | Minus |
chr2R | 21145070 | chr2R | 2531941..2532105 | 278..114 | 825 | 100 | Minus |
chr2R | 21145070 | chr2R | 2532165..2532279 | 115..1 | 575 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 6643003..6643547 | 1179..635 | 2710 | 99.8 | Minus |
2R | 25286936 | 2R | 6642416..6642886 | 1647..1177 | 2355 | 100 | Minus |
2R | 25286936 | 2R | 6644492..6644684 | 470..278 | 965 | 100 | Minus |
2R | 25286936 | 2R | 6644212..6644385 | 640..467 | 870 | 100 | Minus |
2R | 25286936 | 2R | 6644742..6644906 | 278..114 | 825 | 100 | Minus |
2R | 25286936 | 2R | 6644966..6645080 | 115..1 | 575 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 6644202..6644746 | 1179..635 | 2710 | 99.8 | Minus |
2R | 25260384 | 2R | 6643615..6644085 | 1647..1177 | 2355 | 100 | Minus |
2R | 25260384 | 2R | 6645691..6645883 | 470..278 | 965 | 100 | Minus |
2R | 25260384 | 2R | 6645411..6645584 | 640..467 | 870 | 100 | Minus |
2R | 25260384 | 2R | 6645941..6646105 | 278..114 | 825 | 100 | Minus |
2R | 25260384 | 2R | 6646165..6646279 | 115..1 | 575 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rt1b | 5171 | Rt1b RT1B 5150bp | 1327..1457 | 138..268 | 115 | 57.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 2529617..2530082 | 1180..1645 | 100 | <- | Minus |
chr2R | 2530202..2530740 | 641..1179 | 100 | <- | Minus |
chr2R | 2531411..2531582 | 469..640 | 100 | <- | Minus |
chr2R | 2531693..2531882 | 279..468 | 100 | <- | Minus |
chr2R | 2531941..2532103 | 116..278 | 100 | <- | Minus |
chr2R | 2532165..2532279 | 1..115 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-2-RA | 1..1290 | 70..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-2-RA | 1..1290 | 70..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-2-RA | 1..1290 | 70..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-2-RA | 1..1290 | 70..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-2-RA | 1..1290 | 70..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-2-RA | 1..1645 | 1..1645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-2-RA | 1..1645 | 1..1645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-2-RA | 19..1663 | 1..1645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-2-RA | 1..1645 | 1..1645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fmo-2-RA | 19..1663 | 1..1645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6644212..6644383 | 469..640 | 100 | <- | Minus |
2R | 6644494..6644683 | 279..468 | 100 | <- | Minus |
2R | 6644742..6644904 | 116..278 | 100 | <- | Minus |
2R | 6643003..6643541 | 641..1179 | 100 | <- | Minus |
2R | 6642418..6642883 | 1180..1645 | 100 | <- | Minus |
2R | 6644966..6645080 | 1..115 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6644212..6644383 | 469..640 | 100 | <- | Minus |
2R | 6644494..6644683 | 279..468 | 100 | <- | Minus |
2R | 6644742..6644904 | 116..278 | 100 | <- | Minus |
2R | 6643003..6643541 | 641..1179 | 100 | <- | Minus |
2R | 6642418..6642883 | 1180..1645 | 100 | <- | Minus |
2R | 6644966..6645080 | 1..115 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6644212..6644383 | 469..640 | 100 | <- | Minus |
2R | 6644494..6644683 | 279..468 | 100 | <- | Minus |
2R | 6644742..6644904 | 116..278 | 100 | <- | Minus |
2R | 6643003..6643541 | 641..1179 | 100 | <- | Minus |
2R | 6642418..6642883 | 1180..1645 | 100 | <- | Minus |
2R | 6644966..6645080 | 1..115 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 2529923..2530388 | 1180..1645 | 100 | <- | Minus |
arm_2R | 2530508..2531046 | 641..1179 | 100 | <- | Minus |
arm_2R | 2531717..2531888 | 469..640 | 100 | <- | Minus |
arm_2R | 2531999..2532188 | 279..468 | 100 | <- | Minus |
arm_2R | 2532247..2532409 | 116..278 | 100 | <- | Minus |
arm_2R | 2532471..2532585 | 1..115 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6646165..6646279 | 1..115 | 100 | Minus | |
2R | 6643617..6644082 | 1180..1645 | 100 | <- | Minus |
2R | 6644202..6644740 | 641..1179 | 100 | <- | Minus |
2R | 6645411..6645582 | 469..640 | 100 | <- | Minus |
2R | 6645693..6645882 | 279..468 | 100 | <- | Minus |
2R | 6645941..6646103 | 116..278 | 100 | <- | Minus |
Translation from 69 to 1358
> GH12207.pep MIKTSVDKRRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFS EEMPKDEYDEVHSSMYEGLRTNLPKEVMGYPDYSYPDDITESFITSNQVL EFLRSYAEHFKLKAHIKLQHEVIRVRPRLDDWEVYVWDHSTDTCDPVYYD FVYVCNGHYTEPDLPEVEGLDLFEGNKMHSHLYRKADKFKDARVLIIGAG PSGMDITNHVRLAAKQVFLSHHLSTTPNTAFMGNVTQKPDVKRFTKDGAV FTDGSTESFDHVMFCTGYKYTFPCLSTDVGVQVIDNFVQPLWKHCININH PTMAFVGLPFNVIPTHIFDMQVRFTLKFFTGQRKFPSREQMIADLEQEIG ERWGCGVRNQKKAHQMGERQFVYYNELASIAGIENIKPVIHKLMKDCGKK YIFELDTYRSNKYTILDDENFLKNGEAIV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13806-PA | 425 | GF13806-PA | 4..423 | 8..427 | 2060 | 89.8 | Plus |
Dana\GF12882-PA | 416 | GF12882-PA | 4..414 | 11..423 | 1015 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10818-PA | 429 | GG10818-PA | 1..429 | 1..429 | 2224 | 94.4 | Plus |
Dere\GG22910-PA | 415 | GG22910-PA | 3..413 | 11..423 | 1011 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22902-PA | 427 | GH22902-PA | 1..424 | 1..423 | 1917 | 80.4 | Plus |
Dgri\GH20181-PA | 370 | GH20181-PA | 3..357 | 11..367 | 819 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fmo-2-PA | 429 | CG3174-PA | 1..429 | 1..429 | 2312 | 100 | Plus |
Fmo-1-PA | 416 | CG3006-PA | 4..414 | 11..423 | 969 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18387-PA | 427 | GI18387-PA | 10..426 | 9..425 | 1926 | 81.1 | Plus |
Dmoj\GI20708-PA | 415 | GI20708-PA | 3..413 | 11..423 | 968 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20239-PA | 432 | GL20239-PA | 11..429 | 8..426 | 2022 | 86.4 | Plus |
Dper\GL11186-PA | 415 | GL11186-PA | 3..413 | 11..423 | 1016 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16437-PA | 432 | GA16437-PA | 11..429 | 8..426 | 2022 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20867-PA | 429 | GM20867-PA | 1..429 | 1..429 | 2292 | 97.7 | Plus |
Dsec\GM16071-PA | 416 | GM16071-PA | 4..414 | 11..423 | 989 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10319-PA | 429 | GD10319-PA | 1..429 | 1..429 | 2302 | 98.1 | Plus |
Dsim\GD15455-PA | 158 | GD15455-PA | 4..153 | 11..163 | 336 | 44.8 | Plus |
Dsim\GD15456-PA | 84 | GD15456-PA | 1..82 | 341..423 | 159 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21464-PA | 427 | GJ21464-PA | 1..424 | 1..423 | 1912 | 80.9 | Plus |
Dvir\GJ21889-PA | 415 | GJ21889-PA | 3..413 | 11..423 | 964 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19621-PA | 427 | GK19621-PA | 1..426 | 1..425 | 1955 | 80.3 | Plus |
Dwil\GK15849-PA | 415 | GK15849-PA | 3..413 | 11..423 | 1001 | 44.3 | Plus |
Dwil\GK15848-PA | 415 | GK15848-PA | 3..413 | 11..423 | 981 | 43.3 | Plus |
Translation from 69 to 1358
> GH12207.hyp MIKTSVDKRRVCVIGAGTAGLCALKNSLEAGLDAVAYERGTEIGGTWIFS EEMPKDEYDEVHSSMYEGLRTNLPKEVMGYPDYSYPDDITESFITSNQVL EFLRSYAEHFKLKAHIKLQHEVIRVRPRLDDWEVYVWDHSTDTCDPVYYD FVYVCNGHYTEPDLPEVEGLDLFEGNKMHSHLYRKADKFKDARVLIIGAG PSGMDITNHVRLAAKQVFLSHHLSTTPNTAFMGNVTQKPDVKRFTKDGAV FTDGSTESFDHVMFCTGYKYTFPCLSTDVGVQVIDNFVQPLWKHCININH PTMAFVGLPFNVIPTHIFDMQVRFTLKFFTGQRKFPSREQMIADLEQEIG ERWGCGVRNQKKAHQMGERQFVYYNELASIAGIENIKPVIHKLMKDCGKK YIFELDTYRSNKYTILDDENFLKNGEAIV*