BDGP Sequence Production Resources |
Search the DGRC for GH12326
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 123 |
Well: | 26 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17841-RA |
Protein status: | GH12326.pep: gold |
Preliminary Size: | 1948 |
Sequenced Size: | 1836 |
Gene | Date | Evidence |
---|---|---|
CG17841 | 2000-02-14 | Blastp of sequenced clone |
CG17841 | 2001-01-01 | Release 2 assignment |
CG2898 | 2001-01-01 | Release 2 assignment |
CG17841 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17841 | 2008-04-29 | Release 5.5 accounting |
CG17841 | 2008-08-15 | Release 5.9 accounting |
CG17841 | 2008-12-18 | 5.12 accounting |
1836 bp (1836 high quality bases) assembled on 2000-02-14
GenBank Submission: AF181646
> GH12326.complete CCGATTGGTTGCGACGACGAATCCGCACGAATCCATGAGCCCTCGCACCG CCGAGTCTTCCAGCTCCTCCCGATCGCCCAGTCGTCCAATCGCCATGTCC CAGACGCAGTGCCGCCTGTAAACAACCGCCGAGTGAAGTCCGCAGCCCGC AGTCATCGGTAGCAGCAGCGTCAGGAGTCCGGAATCCGTTTCTCGGTTTC CGCAACAGGTTGCGTCGCCTTCGCCAACAGAAGGTTTTAGTGCGAGCTTT GATCAGAGCGTGGAGTGCGTATACGCGCCAGGATGCAGCAGCGCCGACAG CCGGCGAATGGCAACGGCAGAGGAGGAGGAACCACCGCCGCCGTCCGTAC GGAGGAGCAGCAACAACAGCAGCAGCCATTGAGTCAGGATGCTGGCGCCA AGGAGGCGGGCAGCACGCCGGGCAAGGCAACGGGACGCGGCTGCTATTTC TCGCTGGCCTTCTCCATCGGTTCGATGGGCCTGGCCTGCGGCAGCCTGTG GCAGATACCGAACAGCAGTGACCGCATCTCGCTGCAGCGCGGCCTGGTGC TCACCTCGCTGGGATTCATCTATTTTGTCTCGCTAACGGACTTCTGCAAC AAATACCTGCTGGAGACGACGCATGGACAGCGCTTTCGTCGCAAGTACCG CCTGATGATGTCCGACGTCCTGGAGATAACCAACAAAATCGTCTCGGCAA TCCAGGCCTCATTCTCCTTCTTCGTGGGACTCATCGTCTGCAAGTCGACG TGCACCAAATCCTTTGTATATGCATCCCACTTCTTGATGGAGGCGTACGG TTGGTTCGGCACTGCTTACTTTATGTACGACATCTGGTCGATGTACAAGG TGCACACCCAGAAGATCGCCGACAAGCTGCACCTGCTGCGCATTACCAAG GGTCAAGGGGCGGTGGTGAGCAATGGCCACGCCAATGGCAAGGTCAACGG CAAGTCGGCCAGCGGCAACAACAACGGCAGCACTCCAACGAATCTGCACG AGATCTGCGACTACGATGGAGCCTGTGTCCAGATACCCAAGGACGGCAGA TGGGACTTTCTCAAGTACGTGGTCACGCACCCGGTCATGATGATACACCA TGTCTTCATCGGAACATTTGGATTGCTGGTGGTGACGTACATTCGCGGTG GCGGTCACTGCATCTACAGCTACATGTTCATGATGGAGTTCTCCACGCCG TTCGTCTCGTTGCGCAGCATCCTGAGCACCATGCGCCTCAAGGATTCACG TGTGTACATCGCCAACGGTCTGCTGATGCTGGCCACCTTCTTCGTGTGCC GCGTCTGCATGTGGCCATACGTGATGTGGCGCTACAGCCTGGCCATTGAG GCTGCATCCCTGTGGTCGGCCATGTGGGGCCTGCCGCGAGGATGCCTCAT CAGCATCGCTATACTGTTCTTGCCACAGCTCTACTGGTTCTATCTGATGG TTTTGGGTGCTCTCAAGGTCTTTCTACCGCAAAAGAGACGGCCGCCCAAC GCAGTTCTATCGGCAAAGTCGGCGGCCGTGCCCACACCAACCCCCACCGC CCTTATAAATGGCAAAAATTAGTGCAAATTGTATTTATTTTGAGGCAGAG TTCCAGCCGCATCCGTTTTGCGGAGATCTTGCTATTGTTTATACATTTTT AATTATACAACAAGAACGACCCACTACTAACCGGAAAACTGAAAACCGGA AACAGAAAACCATGACGGACGGAGGATGAAAAAGGCAGCGGAAACGATGG CGACCTACAAATGAACCGAAGACCATGGACAGACCCTTAGTGTTAAATAA AGACATTATTTACTAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 10259568..10260253 | 1..686 | 3430 | 100 | Plus |
chrX | 22417052 | chrX | 10273159..10273609 | 687..1137 | 2240 | 99.8 | Plus |
chrX | 22417052 | chrX | 10274080..10274428 | 1466..1814 | 1745 | 100 | Plus |
chrX | 22417052 | chrX | 10273680..10274012 | 1137..1469 | 1665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 10368074..10368759 | 1..686 | 3430 | 100 | Plus |
X | 23542271 | X | 10381659..10382109 | 687..1137 | 2255 | 100 | Plus |
X | 23542271 | X | 10382580..10382947 | 1466..1833 | 1825 | 99.7 | Plus |
X | 23542271 | X | 10382180..10382512 | 1137..1469 | 1665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 10376172..10376857 | 1..686 | 3430 | 100 | Plus |
X | 23527363 | X | 10389757..10390207 | 687..1137 | 2255 | 100 | Plus |
X | 23527363 | X | 10390678..10391045 | 1466..1833 | 1825 | 99.7 | Plus |
X | 23527363 | X | 10390278..10390610 | 1137..1469 | 1665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6763..6854 | 285..376 | 153 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6831 | 286..389 | 130 | 63.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6716..6819 | 283..389 | 121 | 62 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1069..1170 | 282..386 | 121 | 62.6 | Plus |
Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 426..613 | 277..478 | 118 | 58.1 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 94..189 | 295..389 | 117 | 60.8 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9124..9219 | 295..389 | 117 | 60.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2371..2431 | 919..979 | 116 | 65.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2767..2838 | 919..989 | 114 | 63.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10259568..10260253 | 1..686 | 100 | -> | Plus |
chrX | 10273159..10273609 | 687..1137 | 99 | -> | Plus |
chrX | 10273681..10274010 | 1138..1467 | 100 | -> | Plus |
chrX | 10274082..10274425 | 1468..1814 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17841-RA | 1..1290 | 283..1572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17841-RA | 1..1290 | 283..1572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17841-RA | 1..1290 | 283..1572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17841-RA | 1..1290 | 283..1572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17841-RA | 1..1290 | 283..1572 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17841-RA | 24..1837 | 1..1814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17841-RA | 24..1837 | 1..1814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17841-RA | 23..1836 | 1..1814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17841-RA | 24..1837 | 1..1814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17841-RA | 23..1836 | 1..1814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10368074..10368759 | 1..686 | 100 | -> | Plus |
X | 10381659..10382109 | 687..1137 | 100 | -> | Plus |
X | 10382181..10382510 | 1138..1467 | 100 | -> | Plus |
X | 10382582..10382928 | 1468..1814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10368074..10368759 | 1..686 | 100 | -> | Plus |
X | 10381659..10382109 | 687..1137 | 100 | -> | Plus |
X | 10382181..10382510 | 1138..1467 | 100 | -> | Plus |
X | 10382582..10382928 | 1468..1814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10368074..10368759 | 1..686 | 100 | -> | Plus |
X | 10381659..10382109 | 687..1137 | 100 | -> | Plus |
X | 10382181..10382510 | 1138..1467 | 100 | -> | Plus |
X | 10382582..10382928 | 1468..1814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10262107..10262792 | 1..686 | 100 | -> | Plus |
arm_X | 10275692..10276142 | 687..1137 | 100 | -> | Plus |
arm_X | 10276214..10276543 | 1138..1467 | 100 | -> | Plus |
arm_X | 10276615..10276961 | 1468..1814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10376172..10376857 | 1..686 | 100 | -> | Plus |
X | 10389757..10390207 | 687..1137 | 100 | -> | Plus |
X | 10390279..10390608 | 1138..1467 | 100 | -> | Plus |
X | 10390680..10391026 | 1468..1814 | 100 | Plus |
Translation from 282 to 1571
> GH12326.hyp MQQRRQPANGNGRGGGTTAAVRTEEQQQQQQPLSQDAGAKEAGSTPGKAT GRGCYFSLAFSIGSMGLACGSLWQIPNSSDRISLQRGLVLTSLGFIYFVS LTDFCNKYLLETTHGQRFRRKYRLMMSDVLEITNKIVSAIQASFSFFVGL IVCKSTCTKSFVYASHFLMEAYGWFGTAYFMYDIWSMYKVHTQKIADKLH LLRITKGQGAVVSNGHANGKVNGKSASGNNNGSTPTNLHEICDYDGACVQ IPKDGRWDFLKYVVTHPVMMIHHVFIGTFGLLVVTYIRGGGHCIYSYMFM MEFSTPFVSLRSILSTMRLKDSRVYIANGLLMLATFFVCRVCMWPYVMWR YSLAIEAASLWSAMWGLPRGCLISIAILFLPQLYWFYLMVLGALKVFLPQ KRRPPNAVLSAKSAAVPTPTPTALINGKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17841-PA | 429 | CG17841-PA | 1..429 | 1..429 | 2274 | 100 | Plus |
Translation from 282 to 1571
> GH12326.pep MQQRRQPANGNGRGGGTTAAVRTEEQQQQQQPLSQDAGAKEAGSTPGKAT GRGCYFSLAFSIGSMGLACGSLWQIPNSSDRISLQRGLVLTSLGFIYFVS LTDFCNKYLLETTHGQRFRRKYRLMMSDVLEITNKIVSAIQASFSFFVGL IVCKSTCTKSFVYASHFLMEAYGWFGTAYFMYDIWSMYKVHTQKIADKLH LLRITKGQGAVVSNGHANGKVNGKSASGNNNGSTPTNLHEICDYDGACVQ IPKDGRWDFLKYVVTHPVMMIHHVFIGTFGLLVVTYIRGGGHCIYSYMFM MEFSTPFVSLRSILSTMRLKDSRVYIANGLLMLATFFVCRVCMWPYVMWR YSLAIEAASLWSAMWGLPRGCLISIAILFLPQLYWFYLMVLGALKVFLPQ KRRPPNAVLSAKSAAVPTPTPTALINGKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19335-PA | 414 | GF19335-PA | 1..410 | 1..428 | 1733 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18353-PA | 425 | GG18353-PA | 1..425 | 1..429 | 2116 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12015-PA | 446 | GH12015-PA | 1..446 | 1..429 | 1694 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17841-PB | 429 | CG17841-PB | 1..429 | 1..429 | 2274 | 100 | Plus |
CG17841-PA | 429 | CG17841-PA | 1..429 | 1..429 | 2274 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15195-PA | 472 | GI15195-PA | 46..423 | 34..408 | 1624 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26846-PA | 466 | GL26846-PA | 19..421 | 6..404 | 1645 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14695-PA | 456 | GA14695-PA | 19..456 | 6..429 | 1669 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11420-PA | 426 | GM11420-PA | 1..282 | 1..285 | 1464 | 96.8 | Plus |
Dsec\GM11420-PA | 426 | GM11420-PA | 358..426 | 361..429 | 347 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16974-PA | 425 | GD16974-PA | 1..425 | 1..429 | 2218 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14802-PA | 438 | GJ14802-PA | 1..438 | 1..429 | 1724 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10357-PA | 381 | GK10357-PA | 9..379 | 52..429 | 1577 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17842-PA | 432 | GE17842-PA | 1..432 | 1..429 | 2037 | 92.9 | Plus |