Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
GH12334.complete Sequence
1104 bp (1104 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094706
> GH12334.complete
ATCACAATAGCGAATTAAAAACAACATTGCAAAGCGAAAACGCCCTGAAA
ACAATGATTATAAAAGCAATTAGATAGTTACAAAACGCATTGAAATGAGC
AAACACATCTGCACCCGCTGGGCCTTTGACCTGGGCAGCTGGAGGCCCAC
ACTACCTCAACTGAGCCAGGCGGTGGCCTCAATTCAACCGGAGGAACGAG
CTCGGCTTATGAAGTTCCACTTTATCGATGACTTTCTGTCCTCGCTAATT
GGTCGTCTTTTCATGCGAAAATATGTGAGCACGTGCAGCGGATTGCCGTC
GGCCGAAGTGAAGTTCGCCCGGGATGTGAGGGGTAAACCTTACTGGGTGA
AAGGGGAGGACTACGATGGGCCACCTCTCAGCTTCAATGTCTCCCATCAG
GGAAGCCTGGTACTTCTAGCGGGCATTGCAGGAGAGAGCAGTGATCCCGA
CTTTGGAATCGGCACAGATGTCATGAAGATCGAGTACAATGGTGGCAAGC
CTCTGTCGGAATTCTTTGGCCTGATGAAGAGCAAATTTTCGGCGGAGGAA
TGGAGTTATATTGGAAGACCGCATCATGATGAACGGGAGCAGGTGAAGGC
CTTTATGCGTCACTGGTGTCTCAAGGAGGCGTACGTCAAGGAGCTGGGTG
TTGGCATCACTGTAGATCTGCAAAAGATCAGCTTCTCAGTGGACACTACT
CGCAGTTTGGAGACAGATGTTTCCCCTCTGATCGGTACTAGTCTGCGTTG
CCACGACCAACCCATGGACAATTGGCATTTCGAGGAGCATTTACTGCAGG
AGGACTACTGTGCGGCCATTGCATTCCGGAATTGCTTGCCACAGGAGCGT
GGAAAGTTCAAGTTTCTGCAAGTTGAGGAACTTCTCGTGAAGAGTGAAGA
TTCGGAACTTGAGGAAGTGATCAGCTACTGCCAAAAGGCTCTTCTTAAGC
CCTACAAGCGATCATGATGTATAGGAACTATAAGGAATCTAAGCCAAGCA
AACGTAGCTCCTAAAAATAGCGTTATCCCTAGAATAAACATGCATTTATA
TTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
GH12334.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:22:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eap-RA | 1061 | eap-RA | 1..1059 | 1..1059 | 5295 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:49:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 12140031..12141087 | 1..1057 | 5285 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:46:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:49:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12149273..12150331 | 1..1059 | 5295 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:51:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 12142373..12143431 | 1..1059 | 5295 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 02:49:57 has no hits.
GH12334.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:50:43 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 12140031..12141087 | 1..1057 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:37:34 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eap-RA | 1..873 | 95..967 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:31:12 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eap-RA | 1..873 | 95..967 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:14:55 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eap-RA | 1..873 | 95..967 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:04:31 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eap-RA | 1..873 | 95..967 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:22:53 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eap-RA | 1..873 | 95..967 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:57:17 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eap-RA | 1..1057 | 1..1057 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:31:12 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eap-RA | 1..1057 | 1..1057 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:14:55 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eap-RA | 1..1057 | 1..1057 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:04:31 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eap-RA | 1..1057 | 1..1057 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:22:53 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eap-RA | 1..1057 | 1..1057 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:50:43 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12149273..12150329 | 1..1057 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:50:43 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12149273..12150329 | 1..1057 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:50:43 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12149273..12150329 | 1..1057 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:14:55 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12142373..12143429 | 1..1057 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:38:17 Download gff for
GH12334.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12142373..12143429 | 1..1057 | 100 | | Plus |
GH12334.pep Sequence
Translation from 94 to 966
> GH12334.pep
MSKHICTRWAFDLGSWRPTLPQLSQAVASIQPEERARLMKFHFIDDFLSS
LIGRLFMRKYVSTCSGLPSAEVKFARDVRGKPYWVKGEDYDGPPLSFNVS
HQGSLVLLAGIAGESSDPDFGIGTDVMKIEYNGGKPLSEFFGLMKSKFSA
EEWSYIGRPHHDEREQVKAFMRHWCLKEAYVKELGVGITVDLQKISFSVD
TTRSLETDVSPLIGTSLRCHDQPMDNWHFEEHLLQEDYCAAIAFRNCLPQ
ERGKFKFLQVEELLVKSEDSELEEVISYCQKALLKPYKRS*
GH12334.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32099-PA | 290 | CG32099-PA | 1..290 | 1..290 | 1543 | 100 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:28:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA16677-PB | 303 | GA16677-PB | 1..300 | 1..288 | 1166 | 73.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:28:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM25331-PA | 1561 | GM25331-PA | 74..273 | 71..270 | 1007 | 92.5 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:29:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ12320-PA | 293 | GJ12320-PA | 1..291 | 1..289 | 1149 | 72.2 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:29:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK25462-PA | 1603 | GK25462-PA | 77..334 | 14..241 | 744 | 59.8 | Plus |
GH12334.hyp Sequence
Translation from 94 to 966
> GH12334.hyp
MSKHICTRWAFDLGSWRPTLPQLSQAVASIQPEERARLMKFHFIDDFLSS
LIGRLFMRKYVSTCSGLPSAEVKFARDVRGKPYWVKGEDYDGPPLSFNVS
HQGSLVLLAGIAGESSDPDFGIGTDVMKIEYNGGKPLSEFFGLMKSKFSA
EEWSYIGRPHHDEREQVKAFMRHWCLKEAYVKELGVGITVDLQKISFSVD
TTRSLETDVSPLIGTSLRCHDQPMDNWHFEEHLLQEDYCAAIAFRNCLPQ
ERGKFKFLQVEELLVKSEDSELEEVISYCQKALLKPYKRS*
GH12334.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:30:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eap-PA | 290 | CG32099-PA | 1..290 | 1..290 | 1543 | 100 | Plus |