BDGP Sequence Production Resources |
Search the DGRC for GH12350
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 123 |
Well: | 50 |
Vector: | pOT2 |
Associated Gene/Transcript | CBP-RA |
Protein status: | GH12350.pep: gold |
Preliminary Size: | 2149 |
Sequenced Size: | 2185 |
Gene | Date | Evidence |
---|---|---|
CG1435 | 2000-02-14 | Blastp of sequenced clone |
CG1435 | 2001-01-01 | Release 2 assignment |
CG1435 | 2003-01-01 | Sim4 clustering to Release 3 |
CBP | 2008-04-29 | Release 5.5 accounting |
CBP | 2008-08-15 | Release 5.9 accounting |
CBP | 2008-12-18 | 5.12 accounting |
2185 bp (2185 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145675
> GH12350.complete AACGCTTAAGCGAACGGTTGTGTTTACTCCCAAGCAAAGATATCCAAAAA AAAAAAAAACTGAAACCACAGAGAAATCAAAATAGAAATTAGCGGACTCA AAAACAAAGTGTAACAAAACAAAGCAGAAAAATAAAGGCAAACATTTTTT TGTGGTGCATCTTCGAAAAAACCGGTTGTTAAATGCGCGTTGCAATCGAA ATAATAACAAGAGTTCAACAACAAAATCCCTAAAAAAAAGCAACGTTGCA CATTTTCTCGAGTGCAGTTCAAACTGTAAGGAAAACGTAGCGAAAATTGA GGAAAAATTTAAGAAAACCGAGGTTAAAACTTGAGCGAAAAACAAAATGG CATTCTCCATCGTGAGCCGTGGTATTTTGCGCACTTCAAGAGAAATTCTG GAACGCAACATGGCCGCAACTGTCGGCGTTCTGCAGCAGAATGCCTCCCC GCCCCCAAACACGCCCATTTCGCACAGCGATTGTCACCGCCTGGCATCTG GCGGCATTATCTGTGGACATGGAGCACATTCACTGCTTTGGCATCAAATG CCAACTGCCGTGGTCCAGGCTGTCCGTCAATATTCAAAGAAGGCCGGAGC GGCCAAATTGCGACGGGAGGTGGAAAGTGATAGCGATTCCGACTCGGATG ATGAGTTCGAGCGTCGTCGCCAGAAAATGGATTCCAAGCGCAGCGAACGG GGCGACTCAGCATTCTGGCGCCGCAAAATGCGTACTCTCCACCGCATTTT GGACGTTAATCACGACGGCGTCGTGTCCTTCGACGACTTTAGTTTGCTGG CCAAACGCTTTAGCGATCTGGGCCATTTGACCCCAGAGGTCGCTGCCGAA TTCAACGATGTGATCAAGCATACTTGGGAAGAGCAGTTCGGGGAGATAAC CCCATACAATCTGGTAACTGCCGAGCAGTTCCTCACCGATCTGCACCATC GTCTCAACGACAAGAAGATGGCCAAACGCATCGGTCGCTTCCTGCCCTAC TTGTTTAAGGCTGTGGACTTTGATCACACTGGCCATTTGGATCTCGAACA ATACAAGCTCTTCTTCCGTTGTCTGGGACTGACCGAAGACGATGCTGCCG TTTCATTCGCTGTGATAGACAAGAACGGCGATGGCCAATTGTCGCTCAAG GAGTTTGTGCATTTGGGCCGTCAGTTCTTTTTAACCGAGGACGACTCGAA GATATCGAAAATGTTCTGGGGACCGCTGGTCGCTGATCATTGACGGGTTG CAGTCACTGCTGTAGATTACAATACAACCAAATCAACAATAACCCAACAA AAAAATCCTTACTACAATCAAGATTATCAGAACCATCAACACAACAACGT CCGATGCCATAACATCGGCAACAATAACACCAATGAGCCAATGCTACATT ATACATTGAATACGACAACGATGTTGGCCAATAACAATTACAATAAGATA GTGGCCACTTCGTTGCCAACTCGCGTGCAGGCGGCAGGCGGCAGTTGGCT AAATCTACAGCATGTGGCGCCTCATAAATCGGGACCGTTAATAAACATTA GCAACACCACCACGATCGTTATAAGGAACATGAGCATTTACGATTATTTT CGGCAACACTTGTCCAGTTCGAAGCGCCAGCGCTCGACCTTTGAGCCCCA TCCATCGCCCACTACGTATCCCGCCTCCAAGTTGCGCAAGCACAACTTTA GTAATTATCAAAAGGAACGGGAACGGGAAAGGGAAGACCGACAGAAAGAT AATAATAATAATAATCATCGAACCAAGGGCAAACCATCATTAGATGACTA CGATATAAGATTTTTTGTCTACCTTAACTCGCTAATAATATTCACAATGT CGTGCAGTCGTCAATCGGCCGCCGAGGGCGATGACCTCAAGCATTTCATT TGCGACCGGATCCGGAAATTCGATCGCCTACGACGAAAGGCAAGAAAACG CCGCAAGAGAAGGCCCAAAAAGCTGGTCGAGGATCAAATGCACCATTTAT AAACTCTGAAAAGTGGAGCTACATACTATTCACGGTCACCCTATTTACCA TATAATCGATTATTTTTTTTTTGTCTAGTTAAGAGTTATGTTTAACTGAT ATATTACACAATACAGCAAGCATGATATAACGGAATAAAAATGATTTTTA AATATACTATAAATAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 7233503..7234662 | 1008..2167 | 5800 | 100 | Plus |
chrX | 22417052 | chrX | 7229301..7229787 | 1..487 | 2435 | 100 | Plus |
chrX | 22417052 | chrX | 7233125..7233435 | 700..1010 | 1555 | 100 | Plus |
chrX | 22417052 | chrX | 7232231..7232448 | 484..701 | 1075 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 7341572..7342732 | 1008..2168 | 5805 | 100 | Plus |
X | 23542271 | X | 7337370..7337856 | 1..487 | 2435 | 100 | Plus |
X | 23542271 | X | 7341194..7341504 | 700..1010 | 1555 | 100 | Plus |
X | 23542271 | X | 7340300..7340517 | 484..701 | 1075 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 7349670..7350830 | 1008..2168 | 5805 | 100 | Plus |
X | 23527363 | X | 7345468..7345954 | 1..487 | 2435 | 100 | Plus |
X | 23527363 | X | 7349292..7349602 | 700..1010 | 1555 | 100 | Plus |
X | 23527363 | X | 7348398..7348615 | 484..701 | 1075 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TAHRE | 10463 | TAHRE OSV 10463bp | 6009..6148 | 15..149 | 139 | 57.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 7232235..7232447 | 488..700 | 100 | -> | Plus |
chrX | 7229301..7229787 | 1..487 | 100 | -> | Plus |
chrX | 7233126..7233434 | 701..1009 | 100 | -> | Plus |
chrX | 7233505..7234628 | 1010..2133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CBP-RA | 1..897 | 347..1243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CBP-RA | 1..897 | 347..1243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CBP-RC | 1..1656 | 347..2002 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CBP-RA | 1..897 | 347..1243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CBP-RC | 1..1656 | 347..2002 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CBP-RA | 1..2167 | 1..2167 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CBP-RA | 1..2167 | 1..2167 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CBP-RA | 19..2185 | 1..2167 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CBP-RA | 1..2167 | 1..2167 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CBP-RA | 19..2185 | 1..2167 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7337370..7337856 | 1..487 | 100 | -> | Plus |
X | 7340304..7340516 | 488..700 | 100 | -> | Plus |
X | 7341195..7341503 | 701..1009 | 100 | -> | Plus |
X | 7341574..7342731 | 1010..2167 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7337370..7337856 | 1..487 | 100 | -> | Plus |
X | 7340304..7340516 | 488..700 | 100 | -> | Plus |
X | 7341195..7341503 | 701..1009 | 100 | -> | Plus |
X | 7341574..7342731 | 1010..2167 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7337370..7337856 | 1..487 | 100 | -> | Plus |
X | 7340304..7340516 | 488..700 | 100 | -> | Plus |
X | 7341195..7341503 | 701..1009 | 100 | -> | Plus |
X | 7341574..7342731 | 1010..2167 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 7231403..7231889 | 1..487 | 100 | -> | Plus |
arm_X | 7234337..7234549 | 488..700 | 100 | -> | Plus |
arm_X | 7235228..7235536 | 701..1009 | 100 | -> | Plus |
arm_X | 7235607..7236764 | 1010..2167 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7345468..7345954 | 1..487 | 100 | -> | Plus |
X | 7348402..7348614 | 488..700 | 100 | -> | Plus |
X | 7349293..7349601 | 701..1009 | 100 | -> | Plus |
X | 7349672..7350829 | 1010..2167 | 100 | Plus |
Translation from 346 to 1242
> GH12350.pep MAFSIVSRGILRTSREILERNMAATVGVLQQNASPPPNTPISHSDCHRLA SGGIICGHGAHSLLWHQMPTAVVQAVRQYSKKAGAAKLRREVESDSDSDS DDEFERRRQKMDSKRSERGDSAFWRRKMRTLHRILDVNHDGVVSFDDFSL LAKRFSDLGHLTPEVAAEFNDVIKHTWEEQFGEITPYNLVTAEQFLTDLH HRLNDKKMAKRIGRFLPYLFKAVDFDHTGHLDLEQYKLFFRCLGLTEDDA AVSFAVIDKNGDGQLSLKEFVHLGRQFFLTEDDSKISKMFWGPLVADH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\CBP-PA | 448 | GF21141-PA | 1..297 | 1..298 | 1359 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19641-PA | 298 | GG19641-PA | 1..298 | 1..298 | 1444 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11881-PA | 299 | GH11881-PA | 1..299 | 1..298 | 1146 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CBP-PC | 551 | CG1435-PC | 1..298 | 1..298 | 1564 | 100 | Plus |
CBP-PA | 298 | CG1435-PA | 1..298 | 1..298 | 1564 | 100 | Plus |
CBP-PB | 231 | CG1435-PB | 1..231 | 68..298 | 1210 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15669-PA | 294 | GI15669-PA | 1..294 | 1..298 | 1164 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12924-PA | 391 | GA12924-PA | 1..255 | 1..255 | 1088 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17516-PA | 298 | GM17516-PA | 1..298 | 1..298 | 1571 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19204-PA | 298 | GJ19204-PA | 1..298 | 1..298 | 1207 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16144-PA | 542 | GK16144-PA | 1..281 | 1..274 | 1080 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15713-PA | 302 | GE15713-PA | 1..302 | 1..298 | 1542 | 97.4 | Plus |
Translation from 346 to 1242
> GH12350.hyp MAFSIVSRGILRTSREILERNMAATVGVLQQNASPPPNTPISHSDCHRLA SGGIICGHGAHSLLWHQMPTAVVQAVRQYSKKAGAAKLRREVESDSDSDS DDEFERRRQKMDSKRSERGDSAFWRRKMRTLHRILDVNHDGVVSFDDFSL LAKRFSDLGHLTPEVAAEFNDVIKHTWEEQFGEITPYNLVTAEQFLTDLH HRLNDKKMAKRIGRFLPYLFKAVDFDHTGHLDLEQYKLFFRCLGLTEDDA AVSFAVIDKNGDGQLSLKEFVHLGRQFFLTEDDSKISKMFWGPLVADH*