BDGP Sequence Production Resources |
Search the DGRC for GH12381
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 123 |
Well: | 81 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12290-RA |
Protein status: | GH12381.pep: gold |
Preliminary Size: | 3051 |
Sequenced Size: | 3079 |
Gene | Date | Evidence |
---|---|---|
CG12290 | 2001-01-01 | Release 2 assignment |
CG12290 | 2001-09-19 | Blastp of sequenced clone |
CG12290 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12290 | 2008-04-29 | Release 5.5 accounting |
CG12290 | 2008-08-15 | Release 5.9 accounting |
CG12290 | 2008-12-18 | 5.12 accounting |
3079 bp (3079 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058351
> GH12381.complete GAACGCTTCGGAGTGAAGATCGTGCTCGTCCGATCGGTGCGCGTGATAAA TACACGGCGAACAAAATTGAGTCAAGAGTCAGACGGTCGCAAGACAATTG ACAAGACACGAAAAATCATAATAAACACAAGTGGAAAAGCAACTGCTTGA GAGCAAAAAAGAAATTGTTTTTTACAAATCTCGCACGTAAATTAGCAAGC GTTCGCAAGAAACAAACCGCATACAATACTGAACACAAAAAAAAGGGTAT TCAACAAAAAACCAAAAATATTTGGCTGCAAATGTGAAGAGACGAGAGAC AGCGGATATACTACCGAGTGAAATTTGTGTCATAAGCAGAGCCAAAACAA AACCGAAAAGCCAAATTCAATAAAAGGCCATAAGTGACTGTGAAACTGTA AAGTGATGTGTGGTAATCGAAAAACAGCATAAAGAATGGCCATAGACCTC CTGATCCTGGCCCTGCTGCTCGTCTCGTTCCTGATCAACCTGCTGGCGCT GTGTGCCTTTTGGATAACGCCTGGCTTGAGGACCACCGCCAATCGCTTTA CGATCAACCTGCTGGCCATCAATCTCATTGGTTGCTGCATCTTGGCCCCC ACTTTGTTCCTGGGACTGCCGGGAAAGTCTGCGGAGGCATCCACTTCCAA CGCCGAGACCCTGGAGTTCTTCTCGAAGCCGGGAAACCATCAGGTGATAC TTCGTCGCAATGGCCAGCTGGTGGAACAGGACGGCGTGGTGGTGCGAAGG AACATCAGCGAAAACGGCGATACGGTGGAGACCTTCTTCAAGTGCAATGC CACCTACTGTCGCGAGTTGACCATCGATGAGCGCGGAGATGGTGGCTTTG TCATCACGGAAACCGAGACACACGAAGAGAATCTCTCGGCCTTTGAGAGC TTACCCACGGAGGCTCCCATTTTGCCGCCCGTCCAACTGAGATGTTGGTC CATAGACATGACTGCTGCGCTGGGAGCTCTGGCAGTACTGCTCGTGGTGG GGGACACCTGGTGTGCCGTTACGGATCCCCTGCGCTACCACAGTCGCATT TCGGGCGTGAAAACCTGGATCTTCATAGCACTCACCTGGGTGGTGGGCAT ACTCTTTGGAGCCCTTTCCGCCTTCCGAGTTTTGGACTTTGAGGCGGACG CCCTGTTCAGCAGACAACGCCGCCTGGCAGTCACGTACTTCAACATCAGC AGCACCAATAGTATTTTCGGAGTGGTGTACGCCAGTGTCTACTTCATCGT GATCATCCTCCTGCCCTTCGGCTTCGTGTGCGGAATGTACTGGAGGATAT TCAGTGAGGCGCGCGGAAATGGGCTGCGCATGCGCCAGAATGGCTCTTCG CCGCTGCTGCAGAGCGCCTTGAATCTGACGGCTGGCCAGCAGGCGGCTCA AGCCAACCAGTTCTCCAATAGCTTGTGTGTTCATCGGCATTCCATATCCT CGGCCAGTTCGCATGGCGGCAACAGCAGCTTGGGCTTGGGCGGTCTGCAA ATGCAAATTGATCAGCGCCAACAGCCGAGGAGTTCGCCCAGTTGTCTCCG TCGGGACTCGGCCGCGAAAGTACTTTTGCCCACCATCTCGGATGATGGTG GCTCAGATGCGGAAAGTGGAGCCGGAGTTCAACTGATGCCCGTACAGGAG CACTCACTGTCAGATAGAAATCAGAACATTATGCTTACTCTGCAAACAGC CAGTGGTGAAATAAAGAGGAACTACTCCGCCAGACAGCTGCCCCTGTTGG GCACTTCTTCGCAGGATCTGAGGGAGACTAATCGTCTGCAGGGCATACGC CAGGTGCACAGTTCGCCCAATCTCCACAAGTACACGGAACTGCGCCAGGA CTCGCTCAGTGAGGAGTGTGGTTCTCCGCATCTTTTGGGTCACGCCCAGC GGCAGCAGCAGCAGCAATTGCACCTGCAACATCAGCAGCAACAGCATCAT CACCACCAGCAACATCATCCGCACTTCAGTTCGCCGCGCCACCAGCAACA CGGCCACGCCCTCCAGATACCCGCCATTCATGCCTCCCCCAAGGCTCTGA GTTACATGAGCTCCTTGCGACACCGTTTGAGCAACGCCAGTTCGCTATTC AAATACCGTGAGGAGTCGAGAGCAGCCCGCATCAGCATCCTGGTGGTGGT GATGTTTGTGGTCTCGTACCTGCCCTTCGGACTGCTGGTACTCCTGCAAT CGCGACTGTCGGCTGCTAACTTTGGCGGATCCTCCCAGCTGGCCATCTTC ATGATCCTGCTGGCCAATCTCAGTTCGCCATTCATCTTCGCCTACAGGAA CAAGAGGGTGAGGCGAGGAGTCAAGCGGCTGTTTGGTCTGGATTCGTCGT CGGGCCTGCAGCGCAACTGCAGCAGCAGTGTAAAGACCAATGGCACCGCA GGTCCTGCTGCAAGTGGTGCACAATTGCAGCGCAACAGCAGCAAGTTGTC GCAGTACAGCAGCAACAGCTGCAAGTATCTCACCCCCCAGAGTTCCCTGG TCAGTCAAGTGCCGGTGCATACGACCTTGACGTTAAGGCCCAACAGCAGC TGCAGCACCATCATCAATTTCGGTGGCGCCAGGGGCTCAGCGGACTCCGA TGAGCAGCCACCGGCAACACCACCACCTACTGTGGCAGTTGCTCCACCGC CCACACGACCGCAGCGCCCCAAGCTGCAGAGGGGCATCACCATCGTTGAG CACATAGCTATAACACCAACCATGCCCCAAAAGTTCCAGAATCGGCGCGC CAGGCTCTTCGACATGTTCTTCCGCAGCTCCAAGAAACTGCAGGCGGGCT GCCAGAGCCAGAGTTTGCCCACTGAGGTCTAAACGGGGGGTTATGATAAC TATACATATAGGAAGGTAAACAAACACTAAACTTGCTTGCTGAAGAATTC TAAGAACAGTATTCGTAATTTGTAAGTCTAGCAATTAACAAAGACAACTG TTTGAATTTGAGTTTTAAGACCAGATCATGCTGTCCTAGAAGCTTCTCAT GCCAAAAAACAAAACCACAAAGAAAGTCAAACTAGAAAGTTTGAGATGCT TTAAATTAACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12290-RA | 3097 | CG12290-RA | 19..3097 | 1..3079 | 15365 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 22053306..22056365 | 1..3060 | 15195 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 26230270..26233348 | 1..3079 | 15365 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25971101..25974179 | 1..3079 | 15365 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6693..6946 | 2343..2610 | 152 | 56.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2406..2540 | 2541..2672 | 143 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6849 | 2355..2473 | 133 | 62.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 22053306..22055201 | 1..1896 | 99 | == | Plus |
chr3R | 22055273..22056365 | 1968..3060 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12290-RA | 1..2397 | 436..2832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12290-RA | 1..2397 | 436..2832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12290-RA | 1..2397 | 436..2832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12290-RA | 1..2397 | 436..2832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12290-RA | 1..2397 | 436..2832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12290-RA | 19..3078 | 1..3060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12290-RA | 19..3078 | 1..3060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12290-RA | 23..3082 | 1..3060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12290-RA | 19..3078 | 1..3060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12290-RA | 23..3082 | 1..3060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26230270..26233329 | 1..3060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26230270..26233329 | 1..3060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26230270..26233329 | 1..3060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 22055992..22059051 | 1..3060 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25971101..25974160 | 1..3060 | 100 | Plus |
Translation from 435 to 2831
> GH12381.pep MAIDLLILALLLVSFLINLLALCAFWITPGLRTTANRFTINLLAINLIGC CILAPTLFLGLPGKSAEASTSNAETLEFFSKPGNHQVILRRNGQLVEQDG VVVRRNISENGDTVETFFKCNATYCRELTIDERGDGGFVITETETHEENL SAFESLPTEAPILPPVQLRCWSIDMTAALGALAVLLVVGDTWCAVTDPLR YHSRISGVKTWIFIALTWVVGILFGALSAFRVLDFEADALFSRQRRLAVT YFNISSTNSIFGVVYASVYFIVIILLPFGFVCGMYWRIFSEARGNGLRMR QNGSSPLLQSALNLTAGQQAAQANQFSNSLCVHRHSISSASSHGGNSSLG LGGLQMQIDQRQQPRSSPSCLRRDSAAKVLLPTISDDGGSDAESGAGVQL MPVQEHSLSDRNQNIMLTLQTASGEIKRNYSARQLPLLGTSSQDLRETNR LQGIRQVHSSPNLHKYTELRQDSLSEECGSPHLLGHAQRQQQQQLHLQHQ QQQHHHHQQHHPHFSSPRHQQHGHALQIPAIHASPKALSYMSSLRHRLSN ASSLFKYREESRAARISILVVVMFVVSYLPFGLLVLLQSRLSAANFGGSS QLAIFMILLANLSSPFIFAYRNKRVRRGVKRLFGLDSSSGLQRNCSSSVK TNGTAGPAASGAQLQRNSSKLSQYSSNSCKYLTPQSSLVSQVPVHTTLTL RPNSSCSTIINFGGARGSADSDEQPPATPPPTVAVAPPPTRPQRPKLQRG ITIVEHIAITPTMPQKFQNRRARLFDMFFRSSKKLQAGCQSQSLPTEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18953-PA | 809 | GF18953-PA | 13..809 | 13..798 | 3327 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11470-PA | 797 | GG11470-PA | 1..797 | 1..798 | 4144 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19411-PA | 797 | GH19411-PA | 1..797 | 1..798 | 2824 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12290-PB | 798 | CG12290-PB | 1..798 | 1..798 | 4085 | 100 | Plus |
CG12290-PA | 798 | CG12290-PA | 1..798 | 1..798 | 4085 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22614-PA | 812 | GI22614-PA | 1..812 | 1..798 | 2993 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21836-PA | 823 | GL21836-PA | 1..823 | 1..798 | 3026 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11536-PA | 833 | GA11536-PA | 1..833 | 1..798 | 3140 | 80.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10314-PA | 799 | GM10314-PA | 1..799 | 1..798 | 4191 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21275-PA | 799 | GD21275-PA | 1..799 | 1..798 | 4202 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23860-PA | 811 | GJ23860-PA | 1..811 | 1..798 | 2799 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13966-PA | 805 | GK13966-PA | 1..805 | 1..798 | 2866 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23661-PA | 798 | GE23661-PA | 1..798 | 1..798 | 4128 | 97.7 | Plus |
Translation from 435 to 2831
> GH12381.hyp MAIDLLILALLLVSFLINLLALCAFWITPGLRTTANRFTINLLAINLIGC CILAPTLFLGLPGKSAEASTSNAETLEFFSKPGNHQVILRRNGQLVEQDG VVVRRNISENGDTVETFFKCNATYCRELTIDERGDGGFVITETETHEENL SAFESLPTEAPILPPVQLRCWSIDMTAALGALAVLLVVGDTWCAVTDPLR YHSRISGVKTWIFIALTWVVGILFGALSAFRVLDFEADALFSRQRRLAVT YFNISSTNSIFGVVYASVYFIVIILLPFGFVCGMYWRIFSEARGNGLRMR QNGSSPLLQSALNLTAGQQAAQANQFSNSLCVHRHSISSASSHGGNSSLG LGGLQMQIDQRQQPRSSPSCLRRDSAAKVLLPTISDDGGSDAESGAGVQL MPVQEHSLSDRNQNIMLTLQTASGEIKRNYSARQLPLLGTSSQDLRETNR LQGIRQVHSSPNLHKYTELRQDSLSEECGSPHLLGHAQRQQQQQLHLQHQ QQQHHHHQQHHPHFSSPRHQQHGHALQIPAIHASPKALSYMSSLRHRLSN ASSLFKYREESRAARISILVVVMFVVSYLPFGLLVLLQSRLSAANFGGSS QLAIFMILLANLSSPFIFAYRNKRVRRGVKRLFGLDSSSGLQRNCSSSVK TNGTAGPAASGAQLQRNSSKLSQYSSNSCKYLTPQSSLVSQVPVHTTLTL RPNSSCSTIINFGGARGSADSDEQPPATPPPTVAVAPPPTRPQRPKLQRG ITIVEHIAITPTMPQKFQNRRARLFDMFFRSSKKLQAGCQSQSLPTEV*