BDGP Sequence Production Resources |
Search the DGRC for GH12382
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 123 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3214-RA |
Protein status: | GH12382.pep: validated not full length |
Preliminary Size: | 539 |
Sequenced Size: | 544 |
Gene | Date | Evidence |
---|---|---|
CG3214 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3214 | 2002-05-18 | Blastp of sequenced clone |
CG3214 | 2008-04-29 | Release 5.5 accounting |
CG3214 | 2008-08-15 | Release 5.9 accounting |
CG3214 | 2008-12-18 | 5.12 accounting |
544 bp (544 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118779
> GH12382.complete CAAAGTTTTTGGGCATCAACCGGCTGACAAAGCTGTTCCAGATGGTCCGC GAAGCCGGAGGACTGAAGCAAGCGTACCTGAAGCTCTATAGGAACGATGA TCTGAAGATCGGAACCCTGGTGGGCATCGACAAGTACGGCAACAAGTACT TCGAGAACCCGTACTACTTCTACGGCCGCAATCGCTGGATCGAGTTCGCC CCCCACGTCAACATGGACTACGATGGATCCATGATTCCCGCCGAGTGGTA CGGCTGGATGCACTACAAGACCGATCTGCCTCCCATTCGCGATGGATGCC GCCCCAAGTACAAGTGGATAGCGGACCACAGCGAGAATCTTTCCGGAACT AAGGAGGCCTACTACCCCTACTCCACAACACCCAACAAAGTGGAGGCCTG GGAACCCAAGGCGAAGAAGCAGTAGTGTGGCATAGCTTATAATTATTTTT AAATTCAAGTGCAAATGGCTGCGATTGATGAGAACACCCGATCGAGTTAA TAAACCCAATTTTGTTGACTCTGCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 2579424..2579603 | 269..90 | 900 | 100 | Minus |
chr2L | 23010047 | chr2L | 2579065..2579232 | 521..354 | 825 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 2579664..2579755 | 92..1 | 430 | 97.8 | Minus |
chr2L | 23010047 | chr2L | 2579288..2579374 | 354..268 | 420 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2579619..2579798 | 269..90 | 900 | 100 | Minus |
2L | 23513712 | 2L | 2579256..2579427 | 525..354 | 860 | 100 | Minus |
2L | 23513712 | 2L | 2579859..2579950 | 92..1 | 460 | 100 | Minus |
2L | 23513712 | 2L | 2579483..2579569 | 354..268 | 435 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2579619..2579798 | 269..90 | 900 | 100 | Minus |
2L | 23513712 | 2L | 2579256..2579427 | 525..354 | 860 | 100 | Minus |
2L | 23513712 | 2L | 2579859..2579950 | 92..1 | 460 | 100 | Minus |
2L | 23513712 | 2L | 2579483..2579569 | 354..268 | 435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2579062..2579231 | 355..524 | 98 | <- | Minus |
chr2L | 2579288..2579372 | 270..354 | 98 | <- | Minus |
chr2L | 2579424..2579601 | 92..269 | 100 | <- | Minus |
chr2L | 2579665..2579755 | 1..91 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3214-RB | 5..429 | 1..425 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3214-RB | 5..429 | 1..425 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3214-RC | 5..429 | 1..425 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3214-RB | 5..429 | 1..425 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3214-RC | 5..429 | 1..425 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3214-RA | 89..612 | 1..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3214-RA | 89..612 | 1..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3214-RC | 154..677 | 1..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3214-RA | 89..612 | 1..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3214-RC | 154..677 | 1..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2579257..2579426 | 355..524 | 100 | <- | Minus |
2L | 2579483..2579567 | 270..354 | 100 | <- | Minus |
2L | 2579619..2579796 | 92..269 | 100 | <- | Minus |
2L | 2579860..2579950 | 1..91 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2579257..2579426 | 355..524 | 100 | <- | Minus |
2L | 2579483..2579567 | 270..354 | 100 | <- | Minus |
2L | 2579619..2579796 | 92..269 | 100 | <- | Minus |
2L | 2579860..2579950 | 1..91 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2579257..2579426 | 355..524 | 100 | <- | Minus |
2L | 2579483..2579567 | 270..354 | 100 | <- | Minus |
2L | 2579619..2579796 | 92..269 | 100 | <- | Minus |
2L | 2579860..2579950 | 1..91 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2579860..2579950 | 1..91 | 100 | Minus | |
arm_2L | 2579257..2579426 | 355..524 | 100 | <- | Minus |
arm_2L | 2579483..2579567 | 270..354 | 100 | <- | Minus |
arm_2L | 2579619..2579796 | 92..269 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2579257..2579426 | 355..524 | 100 | <- | Minus |
2L | 2579483..2579567 | 270..354 | 100 | <- | Minus |
2L | 2579619..2579796 | 92..269 | 100 | <- | Minus |
2L | 2579860..2579950 | 1..91 | 100 | Minus |
Translation from 2 to 424
> GH12382.pep KFLGINRLTKLFQMVREAGGLKQAYLKLYRNDDLKIGTLVGIDKYGNKYF ENPYYFYGRNRWIEFAPHVNMDYDGSMIPAEWYGWMHYKTDLPPIRDGCR PKYKWIADHSENLSGTKEAYYPYSTTPNKVEAWEPKAKKQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20596-PA | 142 | GF20596-PA | 3..142 | 1..140 | 709 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24505-PA | 141 | GG24505-PA | 3..141 | 1..139 | 732 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10577-PA | 141 | GH10577-PA | 4..141 | 2..139 | 667 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND-B17.2-PB | 142 | CG3214-PB | 3..142 | 1..140 | 788 | 100 | Plus |
ND-B17.2-PA | 142 | CG3214-PA | 3..142 | 1..140 | 788 | 100 | Plus |
ND-B17.2-PC | 142 | CG3214-PC | 3..142 | 1..140 | 788 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23033-PA | 140 | GI23033-PA | 3..140 | 1..138 | 662 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26457-PA | 142 | GL26457-PA | 3..142 | 1..140 | 700 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16708-PA | 142 | GA16708-PA | 3..142 | 1..140 | 700 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18212-PA | 142 | GM18212-PA | 3..142 | 1..140 | 738 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22820-PA | 142 | GD22820-PA | 3..142 | 1..140 | 738 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23557-PA | 141 | GJ23557-PA | 4..141 | 2..139 | 639 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24493-PA | 141 | GK24493-PA | 3..141 | 1..139 | 689 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15071-PA | 142 | GE15071-PA | 3..142 | 1..140 | 736 | 97.1 | Plus |
Translation from 2 to 424
> GH12382.hyp KFLGINRLTKLFQMVREAGGLKQAYLKLYRNDDLKIGTLVGIDKYGNKYF ENPYYFYGRNRWIEFAPHVNMDYDGSMIPAEWYGWMHYKTDLPPIRDGCR PKYKWIADHSENLSGTKEAYYPYSTTPNKVEAWEPKAKKQ*