BDGP Sequence Production Resources |
Search the DGRC for GH12404
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 124 |
Well: | 4 |
Vector: | pOT2 |
Associated Gene/Transcript | CG42724-RE |
Protein status: | GH12404.pep: gold |
Preliminary Size: | 2367 |
Sequenced Size: | 2489 |
Gene | Date | Evidence |
---|---|---|
CG15187 | 2001-01-01 | Release 2 assignment |
CG33097 | 2001-11-02 | Blastp of sequenced clone |
CG33097 | 2003-01-01 | Sim4 clustering to Release 3 |
CG33097 | 2008-04-29 | Release 5.5 accounting |
CG33097 | 2008-08-15 | Release 5.9 accounting |
CG33097 | 2008-12-18 | 5.12 accounting |
2489 bp (2489 high quality bases) assembled on 2001-11-02
GenBank Submission: AY069106
> GH12404.complete CAGAAAAGTGTAGAAAATTTTCAGGGGTTTTTAAAACGAAAAGTAAGAGG TTGCGTACAGTTAGATTTGTGTGCCATGGATGCGAGCTTAGAGGAGAGCA TGGATAGCGATGGCGCCAGTTCGCCGATTACCAAGACGGAGGCAACGGAA TCTCCGCCAGAAGCGGGTCTCAATGGAAACGGCAGTGGTAGTGGTAGTAC CAGCCAGGAGACCCCAAATTATGGCGTTGCTATACTCAAGGAAAAACCCA GCGAGGCCCATAGGAGCAAGCCCTTCAATGCGTTTAGTGGTCGTCCCATC GGGGAGCACACCGCCCAGCAGCAGGCGCTGCAGCAACAACAACTGCAGCA ACAACAACAGCCACAGCAGCCGCAGCAACAAGCTCCTTCCGGAGCAAATG GAGTCACAGGACCCCCGGAAATCTGGGTGGAAACCAAGGCGGAGGACGGT CGCTCATATTATTACCATGCGGTAACTAGGGAAACCACTTGGTCTCGACC CGATGGCCCCGCTGTCAAGATAATGACCCAGGCAGAGGTGGAGGAGATGG CCAAGCGACCTGCCCAGGCCGCGAAAACGGAAGCCAAGGCAGGCGAGACG TCGGTCGAGATTCCGCCAGTGTCGTCACATCTTACCTCACAACCTCCGCC GCACCTGATGAGCCAGCCACCACCCAATGCGGCAGCACCGCTGCTTTCCC AGCCACCACCCAATGTACGGCAACAGCCACCACCAATGTTCCAGCCACCT GGAATGCAGGCGCCTCCTGGGTTCGGACAGCCGCCGTTTTGTATGCCACC TCCAACTTACGGATTTCCTGGAGGACCGGCACCAGCTGGGGCACCTTGGG GCGTGGGCATTCCGCCTTGGCAGCAACAGCAGCACATGCAAGACAAGCCA GCCAAGTCGCTAATCATTAAGCCGGGTGTTATCGATCCGGCGGTTATAGC GCGAGCAGCAGAGTGGTCAGAGCATCGTGCTCCCGATGGAAGACCGTACT ATTTCCACGCCGGTCGAGGAGAGAGTGTCTGGGAGAAACCGCAGGCGCTG AGGGACATGGAGGCCGCTCGCATGGCTGCCCACTCGGGCGTTGCGCCCGC TGTGGCAACAGCTCCGTCGGGACTACCACCACACTTGCTACCCAACCCTA TGATGCATATGCCACCAGGATCAGGGCCGCCGGGATTTGATCCGCATGCT GCTTTTGCGGCTGCTGCTGCAGCAATGAAAGCCAATTCGGAAAACACTAA GGCTGCACAGGCAGCTGCTTTGGAGAAAGAGGCTAAAAAGGCGGCGGAGG AGAAGCGAAAAAAGGAGGAGGAGCAGAAGAAGGCTGCGGCATCAGCCAAG CAAACGGACAAGAGTCGACCTGTGACAAGTACGCCCATCGCTGGAACGCC ATGGTGTGTCGTATGGACTGGAGATTCCCGCGTCTTCTTTTACAATCCGT CAACTAGGACTTCGGTTTGGGATCGCCCCGAGGACTTGTTGAATCGTGAG GACGTTGACAAAGCGGTAAACGAACGTCCGGAGCAACTGAAGACTCCGCA AGAGAAGTCGGCTGAAGCCGAACAGAAGTCCGGCGAGGAAGCAAATCAAG AGCAGGCTAAATCGCAAGTTCAAGCCCAGCAACTGGATCAGGTGCAGAGG GTGGATGCGGATGATGATGACGACGACGAGGTTATCAAGATACGCACAGA GTCTGAGTCTAGTGTGGAAGAGGTGCCAACCAAACGAGTTCGAATGATTT CCAAGTCGAAGCGGGCAGAGGATGCCGCCCTAGAGGCTGAGCAGCGGGCG GCCAAGGAGCGGGCCTTAGTACCACTAGAAATGCGCGTCACCCAATTCAA GGAAATGCTTCGAGAGAAGGACGTATCGGCTTTCAGCACTTGGGAGAAGG AGCTTCACAAGATCGTGTTCGACCCGCGGTATCTTCTGCTGACTTCGAAG GAACGCAAACAGGTATTTGAAAAGTATGTGAAGGATCGGGCCGAGGAGGA GCGTAAGGAGAAGCGGAACAAGATGCGCCAGAAGCGGGAGGACTTCCGCA GCCTAATGGAAGAAGCCAGGCTGCACGGAAAATCCTCATTCTCGGAGTTT AGCCAGAGGAACGCCAAGGATGAACGGTATCGGGCCATCGAGAAGGTTCG CGAACGAGAGAGTCTCTTCAACGAGTACATCGTGGAGGTGCGGCGCCGCG AAAAGGAGGACAAGCTGTTGAAGAAAGAGCAGCCACTAGCTAGCAGGTTA CAGCACAAATGCACCACCCAAAACACCAAAATACACAAGAGCAACAGCAT CGAGAACCACCTGTACAACACTCTCGACGGTCTATTCCGCCCGCCGTCTG CCATCGCCGTCCACTGATCTACTTGACCACGCACATGTTTGCAATCTGTG TGGTGAGTTACTTGAAACATAACAAGCAAAAACATTTAAATTTGTTTTTC TGCAATAAGAGACAAATTTGGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 2192025..2193510 | 1747..262 | 7430 | 100 | Minus |
chr3R | 27901430 | chr3R | 2191631..2191964 | 2081..1748 | 1670 | 100 | Minus |
chr3R | 27901430 | chr3R | 2193574..2193837 | 264..1 | 1305 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 2190163..2190403 | 2471..2231 | 1205 | 100 | Minus |
chr3R | 27901430 | chr3R | 2190681..2190831 | 2232..2082 | 755 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 6366348..6367833 | 1747..262 | 7430 | 100 | Minus |
3R | 32079331 | 3R | 6365954..6366287 | 2081..1748 | 1670 | 100 | Minus |
3R | 32079331 | 3R | 6367897..6368160 | 264..1 | 1320 | 100 | Minus |
3R | 32079331 | 3R | 6364475..6364727 | 2483..2231 | 1265 | 100 | Minus |
3R | 32079331 | 3R | 6365004..6365154 | 2232..2082 | 755 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 6107179..6108664 | 1747..262 | 7430 | 100 | Minus |
3R | 31820162 | 3R | 6106785..6107118 | 2081..1748 | 1670 | 100 | Minus |
3R | 31820162 | 3R | 6108728..6108991 | 264..1 | 1320 | 100 | Minus |
3R | 31820162 | 3R | 6105306..6105558 | 2483..2231 | 1265 | 100 | Minus |
3R | 31820162 | 3R | 6105835..6105985 | 2232..2082 | 755 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2348..2383 | 1223..1188 | 117 | 80.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 2190163..2190401 | 2233..2471 | 100 | <- | Minus |
chr3R | 2190681..2190831 | 2082..2232 | 100 | <- | Minus |
chr3R | 2191631..2191964 | 1748..2081 | 100 | <- | Minus |
chr3R | 2192025..2193508 | 264..1747 | 100 | <- | Minus |
chr3R | 2193575..2193837 | 1..263 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33097-RA | 1..2292 | 76..2367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42724-RI | 1..2292 | 76..2367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42724-RE | 1..2292 | 76..2367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33097-RA | 1..2292 | 76..2367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42724-RL | 1..2292 | 76..2367 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33097-RA | 129..2599 | 1..2471 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42724-RE | 129..2599 | 1..2471 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42724-RE | 30..2500 | 1..2471 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33097-RA | 129..2599 | 1..2471 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42724-RL | 30..2500 | 1..2471 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6364487..6364725 | 2233..2471 | 100 | <- | Minus |
3R | 6365004..6365154 | 2082..2232 | 100 | <- | Minus |
3R | 6365954..6366287 | 1748..2081 | 100 | <- | Minus |
3R | 6366348..6367831 | 264..1747 | 100 | <- | Minus |
3R | 6367898..6368160 | 1..263 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6364487..6364725 | 2233..2471 | 100 | <- | Minus |
3R | 6365004..6365154 | 2082..2232 | 100 | <- | Minus |
3R | 6365954..6366287 | 1748..2081 | 100 | <- | Minus |
3R | 6366348..6367831 | 264..1747 | 100 | <- | Minus |
3R | 6367898..6368160 | 1..263 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6364487..6364725 | 2233..2471 | 100 | <- | Minus |
3R | 6365004..6365154 | 2082..2232 | 100 | <- | Minus |
3R | 6365954..6366287 | 1748..2081 | 100 | <- | Minus |
3R | 6366348..6367831 | 264..1747 | 100 | <- | Minus |
3R | 6367898..6368160 | 1..263 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 2190209..2190447 | 2233..2471 | 100 | <- | Minus |
arm_3R | 2190726..2190876 | 2082..2232 | 100 | <- | Minus |
arm_3R | 2191676..2192009 | 1748..2081 | 100 | <- | Minus |
arm_3R | 2192070..2193553 | 264..1747 | 100 | <- | Minus |
arm_3R | 2193620..2193882 | 1..263 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6105318..6105556 | 2233..2471 | 100 | <- | Minus |
3R | 6105835..6105985 | 2082..2232 | 100 | <- | Minus |
3R | 6106785..6107118 | 1748..2081 | 100 | <- | Minus |
3R | 6107179..6108662 | 264..1747 | 100 | <- | Minus |
3R | 6108729..6108991 | 1..263 | 100 | Minus |
Translation from 1 to 2366
> GH12404.hyp QKSVENFQGFLKRKVRGCVQLDLCAMDASLEESMDSDGASSPITKTEATE SPPEAGLNGNGSGSGSTSQETPNYGVAILKEKPSEAHRSKPFNAFSGRPI GEHTAQQQALQQQQLQQQQQPQQPQQQAPSGANGVTGPPEIWVETKAEDG RSYYYHAVTRETTWSRPDGPAVKIMTQAEVEEMAKRPAQAAKTEAKAGET SVEIPPVSSHLTSQPPPHLMSQPPPNAAAPLLSQPPPNVRQQPPPMFQPP GMQAPPGFGQPPFCMPPPTYGFPGGPAPAGAPWGVGIPPWQQQQHMQDKP AKSLIIKPGVIDPAVIARAAEWSEHRAPDGRPYYFHAGRGESVWEKPQAL RDMEAARMAAHSGVAPAVATAPSGLPPHLLPNPMMHMPPGSGPPGFDPHA AFAAAAAAMKANSENTKAAQAAALEKEAKKAAEEKRKKEEEQKKAAASAK QTDKSRPVTSTPIAGTPWCVVWTGDSRVFFYNPSTRTSVWDRPEDLLNRE DVDKAVNERPEQLKTPQEKSAEAEQKSGEEANQEQAKSQVQAQQLDQVQR VDADDDDDDEVIKIRTESESSVEEVPTKRVRMISKSKRAEDAALEAEQRA AKERALVPLEMRVTQFKEMLREKDVSAFSTWEKELHKIVFDPRYLLLTSK ERKQVFEKYVKDRAEEERKEKRNKMRQKREDFRSLMEEARLHGKSSFSEF SQRNAKDERYRAIEKVRERESLFNEYIVEVRRREKEDKLLKKEQPLASRL QHKCTTQNTKIHKSNSIENHLYNTLDGLFRPPSAIAVH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42724-PI | 763 | CG42724-PI | 1..763 | 26..788 | 3987 | 100 | Plus |
CG42724-PE | 763 | CG42724-PE | 1..763 | 26..788 | 3987 | 100 | Plus |
CG42724-PL | 763 | CG42724-PL | 1..763 | 26..788 | 3987 | 100 | Plus |
CG42724-PM | 761 | CG42724-PM | 1..742 | 26..754 | 3754 | 97.6 | Plus |
CG42724-PK | 1123 | CG42724-PK | 1..719 | 26..744 | 3752 | 100 | Plus |
Translation from 75 to 2366
> GH12404.pep MDASLEESMDSDGASSPITKTEATESPPEAGLNGNGSGSGSTSQETPNYG VAILKEKPSEAHRSKPFNAFSGRPIGEHTAQQQALQQQQLQQQQQPQQPQ QQAPSGANGVTGPPEIWVETKAEDGRSYYYHAVTRETTWSRPDGPAVKIM TQAEVEEMAKRPAQAAKTEAKAGETSVEIPPVSSHLTSQPPPHLMSQPPP NAAAPLLSQPPPNVRQQPPPMFQPPGMQAPPGFGQPPFCMPPPTYGFPGG PAPAGAPWGVGIPPWQQQQHMQDKPAKSLIIKPGVIDPAVIARAAEWSEH RAPDGRPYYFHAGRGESVWEKPQALRDMEAARMAAHSGVAPAVATAPSGL PPHLLPNPMMHMPPGSGPPGFDPHAAFAAAAAAMKANSENTKAAQAAALE KEAKKAAEEKRKKEEEQKKAAASAKQTDKSRPVTSTPIAGTPWCVVWTGD SRVFFYNPSTRTSVWDRPEDLLNREDVDKAVNERPEQLKTPQEKSAEAEQ KSGEEANQEQAKSQVQAQQLDQVQRVDADDDDDDEVIKIRTESESSVEEV PTKRVRMISKSKRAEDAALEAEQRAAKERALVPLEMRVTQFKEMLREKDV SAFSTWEKELHKIVFDPRYLLLTSKERKQVFEKYVKDRAEEERKEKRNKM RQKREDFRSLMEEARLHGKSSFSEFSQRNAKDERYRAIEKVRERESLFNE YIVEVRRREKEDKLLKKEQPLASRLQHKCTTQNTKIHKSNSIENHLYNTL DGLFRPPSAIAVH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16658-PA | 816 | GF16658-PA | 1..816 | 1..763 | 2380 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10500-PA | 771 | GG10500-PA | 1..771 | 1..763 | 3219 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18087-PA | 767 | GH18087-PA | 1..750 | 1..719 | 2433 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42724-PI | 763 | CG42724-PI | 1..763 | 1..763 | 3987 | 100 | Plus |
CG42724-PE | 763 | CG42724-PE | 1..763 | 1..763 | 3987 | 100 | Plus |
CG42724-PL | 763 | CG42724-PL | 1..763 | 1..763 | 3987 | 100 | Plus |
CG42724-PM | 761 | CG42724-PM | 1..742 | 1..729 | 3754 | 97.6 | Plus |
CG42724-PK | 1123 | CG42724-PK | 1..719 | 1..719 | 3752 | 100 | Plus |
CG42724-PC | 1123 | CG42724-PC | 1..719 | 1..719 | 3752 | 100 | Plus |
CG42724-PG | 669 | CG42724-PG | 1..669 | 1..669 | 3506 | 100 | Plus |
CG3542-PA | 806 | CG3542-PA | 54..364 | 441..717 | 196 | 24.1 | Plus |
CG3542-PA | 806 | CG3542-PA | 1..517 | 195..718 | 184 | 22 | Plus |
CG2839-PA | 826 | CG2839-PA | 306..620 | 385..719 | 183 | 22.6 | Plus |
CG11835-PD | 795 | CG11835-PD | 311..682 | 55..424 | 159 | 25.8 | Plus |
CG11835-PC | 795 | CG11835-PC | 311..682 | 55..424 | 159 | 25.8 | Plus |
CG11835-PB | 795 | CG11835-PB | 311..682 | 55..424 | 159 | 25.8 | Plus |
CG11835-PA | 795 | CG11835-PA | 311..682 | 55..424 | 159 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24587-PA | 771 | GI24587-PA | 1..723 | 1..732 | 2319 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22066-PA | 1110 | GL22066-PA | 1..748 | 1..755 | 2318 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27365-PD | 1145 | GA27365-PD | 1..783 | 1..755 | 2356 | 76.1 | Plus |
Dpse\GA27365-PE | 781 | GA27365-PE | 1..741 | 1..719 | 2339 | 79.5 | Plus |
Dpse\GA27365-PF | 587 | GA27365-PF | 1..583 | 1..561 | 1522 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10557-PA | 511 | GM10557-PA | 38..511 | 290..763 | 2471 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19549-PA | 763 | GD19549-PA | 1..763 | 1..763 | 3976 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22653-PA | 1124 | GJ22653-PA | 1..727 | 1..719 | 2375 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10926-PA | 1117 | GK10926-PA | 65..763 | 54..755 | 2119 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24104-PA | 774 | GE24104-PA | 1..774 | 1..763 | 3158 | 92.2 | Plus |